Miyakogusa Predicted Gene

Lj0g3v0009989.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9HB25_POPTR 555 79.1 84.3 (tr|B9HB25) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_866091 PE=4 SV=1
TAIR_pep AT5G25100.2 529 75.6 82.8 | Symbols: | Endomembrane protein 70 protein family | chr5:8648374-8651015 REVERSE LENGTH=651
Medicago Medtr1g014080.1 532 75.9 83.4 | endomembrane protein 70 family protein | HC | chr1:3132558-3127477 | 20130731
Soybean Glyma02g36550.1 552 79.4 84.6  
LJGI gnl|LJGI|TC58376 174 79.9 79.9 similar to UniRef100_A7P650 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0009989.1 length: 344 aa.
IPR004240 Nonaspanin (TM9SF)
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
HMMPanther PTHR10766 TRANSMEMBRANE 2e-235 1-344
HMMPfam PF02990 EMP70 5.9e-143 1-300
no_ID  
Seg seg seg NA 18-27
232-248
281-293
Putative transmembrane regions
  From To
TM segments
SOSUI		 47 69
80 102
116 138
150 172
202 224
239 261
276 298
307 329
Wolf-PSORT
Lj0g3v0009989.1	cyto 4, nucl 3, plas 3, nucl_plas 3, chlo 2.5, chlo_mito 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0009989.1