Miyakogusa Predicted Gene
- Lj0g3v0008949.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MA03_SOYBN |
683 |
74.3 |
85.8 |
(tr|K7MA03) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G21430.1 |
299 |
39.9 |
56.0 |
| Symbols: B160 | Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase | chr4:11407835-11412159 REVERSE LENGTH=927 |
| Medicago |
Medtr2g011630.2 |
603 |
67.9 |
76.4 |
| transcription factor jumonji (JmjC) domain protein | HC | chr2:2847258-2851462 | 20130731 |
| Soybean |
Glyma15g07210.1 |
681 |
74.3 |
85.8 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0008949.1 |
length: 446 aa. |
| IPR003347 |
JmjC domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMSmart |
SM00558 |
A |
2.5e-05 |
167-443 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
30-51 |
| HMMPanther |
PTHR12549 |
JMJC |
1e-105 |
1-436 |
| HMMPanther |
PTHR12549:SF1 |
TRANSCRIPTION |
1e-105 |
1-436 |
- Wolf-PSORT
Lj0g3v0008949.1 nucl 11, chlo 1, extr 1, vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0008949.1 |
|