Miyakogusa Predicted Gene

Lj0g3v0008909.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KQQ8_SOYBN 344 54.3 64.7 (tr|I1KQQ8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G11260.1 315 50.0 62.0 | Symbols: STP1, ATSTP1 | sugar transporter 1 | chr1:3777460-3780133 FORWARD LENGTH=522
Medicago Medtr4g091370.1 338 53.8 63.4 | sugar porter (SP) family MFS transporter | HC | chr4:36199962-36203365 | 20130731
Soybean Glyma08g06420.1 344 54.3 64.7  
LJGI gnl|LJGI|FS318578 58.0 89.8 89.8 similar to UniRef100_Q5K3W1 Cluster: Monosaccharide transporter; n=1; Populus tremula x Populus tremuloides|Rep: Monosaccharide transporter - Populus tremula x Populus tremuloides, partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0008909.1 length: 375 aa.
IPR003663 Sugar/inositol transporter
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0022891 substrate-specific transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
FPrintScan PR00171 SUGRTRNSPORT 5.1e-13 42-52
142-161
296-306
IPR005828 General substrate transporter
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0022857 transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00083 Sugar_tr 5.4e-54 37-369
IPR005829 Sugar transporter, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
PatternScan PS00216 SUGAR_TRANSPORT_1 NA 337-354
PatternScan PS00217 SUGAR_TRANSPORT_2 NA 147-172
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 1.7e-22 15-367
IPR020846 Major facilitator superfamily domain
ProfileScan PS50850 MFS 23.458 34-375
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 1.5e-15 54-228
HMMPanther PTHR24063 FAMILY 2.5e-106 26-373
HMMPanther PTHR24063:SF72 SUBFAMILY 2.5e-106 26-373
Seg seg seg NA 92-105
Putative transmembrane regions
  From To
TM segments
SOSUI		 25 47
49 71
83 105
123 145
176 198
206 228
295 316
321 343
350 372
Wolf-PSORT
Lj0g3v0008909.1	cyto 4, chlo 3, plas 3, nucl 1, mito 1, E.R. 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0008909.1