Miyakogusa Predicted Gene

Lj0g3v0008879.4

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SVE5_LOTJA 143 100.0 100.0 (tr|I3SVE5) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1

TAIR_pep --No_Hits--

Medicago Medtr2g019140.1 53.9 77.4 83.9 | protease Do-like protein | HC | chr2:6181839-6175380 | 20130731

Soybean Glyma13g29100.1 83.6 67.2 73.4

LJGI gnl|LJGI|TC68099 436 100.0 100.0 weakly similar to UniRef100_A7QVE9 Cluster: Chromosome chr2 scaffold_187, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_187, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)

Putative transmembrane regions

From To

TM segments
SOSUI 2 24

28 50

Wolf-PSORT

Lj0g3v0008879.4 vacu 4, E.R. 3, pero 2, cyto_nucl 2, nucl 1.5, cyto 1.5, E.R._plas 1.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0008879.4

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SVE5_LOTJA	143	100.0	100.0	(tr\|I3SVE5) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep	--No_Hits--
Medicago	Medtr2g019140.1	53.9	77.4	83.9	\| protease Do-like protein \| HC \| chr2:6181839-6175380 \| 20130731
Soybean	Glyma13g29100.1	83.6	67.2	73.4
LJGI	gnl\|LJGI\|TC68099	436	100.0	100.0	weakly similar to UniRef100_A7QVE9 Cluster: Chromosome chr2 scaffold_187, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr2 scaffold_187, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)