Miyakogusa Predicted Gene
- Lj0g3v0008779.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1J7U6_SOYBN |
273 |
69.2 |
78.3 |
(tr|I1J7U6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G56830.1 |
160 |
51.7 |
61.9 |
| Symbols: | Protein of unknown function (DUF565) | chr3:21042755-21043840 REVERSE LENGTH=230 |
| Medicago |
Medtr4g025400.1 |
265 |
70.7 |
80.6 |
| ycf20-like protein | HC | chr4:8599913-8595683 | 20130731 |
| Soybean |
Glyma01g33620.1 |
273 |
69.2 |
78.3 |
|
| LJGI |
gnl|LJGI|FS329541 |
1116 |
100.0 |
100.0 |
similar to UniRef100_A7PYD5 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0008779.2 |
length: 198 aa. |
| IPR007572 |
Uncharacterised protein family Ycf20 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04483 |
DUF565 |
1.7e-16 |
139-197 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
73-86 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
2 |
24 |
| 117 |
139 |
| 149 |
171 |
| 174 |
196 |
- Wolf-PSORT
Lj0g3v0008779.2 chlo 7, plas 4, E.R. 2, nucl_plas 2, golg_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0008779.2 |
|