Miyakogusa Predicted Gene

Lj0g3v0008099.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7LDD5_SOYBN 865 76.7 84.7 (tr|K7LDD5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G21120.1 692 62.9 75.1 | Symbols: AAT1, CAT1 | amino acid transporter 1 | chr4:11270318-11273775 FORWARD LENGTH=594
Medicago Medtr1g030660.1 855 76.0 84.0 | cationic amino acid transporter | HC | chr1:10679998-10681898 | 20130731
Soybean Glyma09g21070.1 865 76.7 84.7  
LJGI gnl|LJGI|TC73417 89.7 81.5 81.5 similar to UniRef100_A7Q1C9 Cluster: Chromosome chr10 scaffold_43, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_43, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0008099.1 length: 550 aa.
IPR002293 Amino acid/polyamine transporter I
method AccNumber shortName E-value location
Biological Process GO:0003333 amino acid transmembrane transport    
Molecular Function GO:0015171 amino acid transmembrane transporter activity    
Cellular Component GO:0016020 membrane    
HMMPIR PIRSF006060 Amino 2.6e-63 14-471
HMMPanther PTHR11785 AMINO 2.2e-203 12-533
IPR015606 Cationic amino acid transporter
HMMPanther PTHR11785:SF53 CATIONIC 2.2e-203 12-533
no_ID  
HMMPfam PF13520 AA_permease_2 1e-49 21-394
HMMPfam PF13906 AA_permease_C 2.7e-14 459-509
Seg seg seg NA 181-192
370-390
Putative transmembrane regions
  From To
TM segments
SOSUI
26 48
59 81
95 117
149 171
176 197
215 237
247 269
296 318
344 363
369 388
402 424
430 452
460 482
490 512
Wolf-PSORT
Lj0g3v0008099.1	plas 10, golg 2, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0008099.1