Miyakogusa Predicted Gene

Lj0g3v0007879.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JGF0_SOYBN 941 67.0 76.2 (tr|I1JGF0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G26760.2 332 54.2 69.9 | Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF408 (InterPro:IPR007308); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:9403869-9407170 REVERSE LENGTH=735
Medicago Medtr1g055080.1 944 68.6 76.5 | RNA polymerase II subunit B1 CTD phosphatase RPAP2, putative | HC | chr1:24256181-24260253 | 20130731
Soybean Glyma02g34860.1 919 65.9 75.1  
LJGI gnl|LJGI|TC62654 1691 100.0 100.0 weakly similar to UniRef100_O04626 Cluster: F2P16.20 protein; n=1; Arabidopsis thaliana|Rep: F2P16.20 protein - Arabidopsis thaliana (Mouse-ear cress), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0007879.1 length: 706 aa.
IPR007308 Protein of unknown function DUF408
method AccNumber shortName E-value location
HMMPfam PF04181 RPAP2_Rtr1 2.2e-20 35-108
ProfileScan PS51479 ZF_RTR1 19.662 32-117
no_ID  
HMMPanther PTHR14732 UNCHARACTERIZED 3.5e-64 11-701
HMMPanther PTHR14732:SF0 SUBFAMILY 3.5e-64 11-701
Seg seg seg NA 138-150
181-192
247-296
Putative transmembrane regions
  From To
TM segments
SOSUI		 588 610
615 636
641 663
Wolf-PSORT
Lj0g3v0007879.1	nucl 8, cyto 2, chlo 1, plas 1, vacu 1, golg 1, golg_plas 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0007879.1