Miyakogusa Predicted Gene

Lj0g3v0006579.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7LZH2_SOYBN 338 50.5 59.7 (tr|K7LZH2) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G02520.1 133 47.0 60.6 | Symbols: | CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT1G58210.1); Has 842 Blast hits to 736 proteins in 154 species: Archae - 2; Bacteria - 99; Metazoa - 236; Fungi - 52; Plants - 90; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). | chr5:561325-563840 FORWARD LENGTH=598

Medicago Medtr1g069020.3 305 37.7 49.3 | SANTA (SANT associated) protein | LC | chr1:29592632-29587810 | 20130731

Soybean Glyma13g19350.1 257 56.4 68.5

LJGI gnl|LJGI|TC71107 1211 99.1 99.1 similar to UniRef100_A3ETG8 Cluster: Integrase; n=1; Leptospirillum sp. Group II UBA|Rep: Integrase - Leptospirillum sp. Group II UBA, partial (5%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0006579.1 length: 876 aa.

IPR015216 SANT associated

method AccNumber shortName E-value location

HMMPfam PF09133 SANTA 2.4e-25 29-125

no_ID

Seg seg seg NA 4-18
779-788

Wolf-PSORT

Lj0g3v0006579.1 chlo 7, nucl 5, cysk 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0006579.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7LZH2_SOYBN	338	50.5	59.7	(tr\|K7LZH2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G02520.1	133	47.0	60.6	\| Symbols: \| CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT1G58210.1); Has 842 Blast hits to 736 proteins in 154 species: Archae - 2; Bacteria - 99; Metazoa - 236; Fungi - 52; Plants - 90; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). \| chr5:561325-563840 FORWARD LENGTH=598
Medicago	Medtr1g069020.3	305	37.7	49.3	\| SANTA (SANT associated) protein \| LC \| chr1:29592632-29587810 \| 20130731
Soybean	Glyma13g19350.1	257	56.4	68.5
LJGI	gnl\|LJGI\|TC71107	1211	99.1	99.1	similar to UniRef100_A3ETG8 Cluster: Integrase; n=1; Leptospirillum sp. Group II UBA\|Rep: Integrase - Leptospirillum sp. Group II UBA, partial (5%)

IPR015216	SANT associated
Lj0g3v0006579.1				length: 876 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF09133	SANTA	2.4e-25	29-125
no_ID
Seg	seg	seg	NA	4-18 779-788