Miyakogusa Predicted Gene
- Lj0g3v0005849.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L6Y0_SOYBN |
361 |
68.0 |
76.2 |
(tr|K7L6Y0) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G26840.1 |
243 |
55.0 |
68.9 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43910.1); Has 835 Blast hits to 835 proteins in 26 species: Archae - 0; Bacteria - 25; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 2; Other Eukaryotes - 768 (source: NCBI BLink). | chr2:11447346-11448871 REVERSE LENGTH=273 |
| Medicago |
Medtr3g437110.1 |
347 |
66.3 |
76.2 |
| crossover junction endodeoxyribonuclease, putative | HC | chr3:12526435-12518817 | 20130731 |
| Soybean |
Glyma15g42880.1 |
354 |
66.9 |
74.4 |
|
| LJGI |
gnl|LJGI|TC67810 |
1600 |
100.0 |
100.0 |
similar to UniRef100_A7PFU9 Cluster: Chromosome chr6 scaffold_15, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_15, whole genome shotgun sequence - Vitis vinifera (Grape), partial (59%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0005849.1 |
length: 268 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
19-31 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
180 |
202 |
- Wolf-PSORT
Lj0g3v0005849.1 chlo 3, golg 3, plas 2, vacu 2, E.R. 2, chlo_mito 2, E.R._vacu 2, E.R._plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0005849.1 |
|