Miyakogusa Predicted Gene
- Lj0g3v0004399.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B9RDH9_RICCO |
174 |
81.4 |
88.2 |
(tr|B9RDH9) 1-acylglycerophosphocholine O-acyltransferase, putative OS=Ricinus communis GN=RCOM_1612980 PE=4 SV=1 |
| TAIR_pep |
AT2G45670.1 |
160 |
63.1 |
70.0 |
| Symbols: | calcineurin B subunit-related | chr2:18815070-18818382 REVERSE LENGTH=539 |
| Medicago |
Medtr8g033180.1 |
167 |
63.8 |
72.3 |
| 1-acylglycerophosphocholine O-acyltransferase-like protein | HC | chr8:12741272-12750991 | 20130731 |
| Soybean |
Glyma03g02160.1 |
166 |
70.1 |
77.8 |
|
| LJGI |
gnl|LJGI|FS325281 |
337 |
100.0 |
100.0 |
similar to UniRef100_A7PY61 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0004399.1 |
length: 113 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR23063 |
ACETYLTRANSFERASE-RELATED |
8e-22 |
4-98 |
| HMMPanther |
PTHR23063:SF1 |
ACETYLTRANSFERASE-RELATED |
8e-22 |
4-98 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
2 |
24 |
- Wolf-PSORT
Lj0g3v0004399.1 chlo 3, vacu 3, cyto_nucl 1.83333, cyto 1.5, cysk_nucl 1.33333, cyto_pero 1.33333, cyto_E.R. 1.33333, cyto_plas 1.33333
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0004399.1 |
|