Miyakogusa Predicted Gene

Lj0g3v0004199.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B7FJK4_MEDTR 488 79.7 86.8 (tr|B7FJK4) Uncharacterized protein OS=Medicago truncatula PE=1 SV=1
TAIR_pep AT5G17770.1 372 69.1 83.7 | Symbols: ATCBR, CBR1, CBR | NADH:cytochrome B5 reductase 1 | chr5:5864543-5866495 REVERSE LENGTH=281
Medicago Medtr8g044160.1 488 79.7 86.8 | NADH-cytochrome b5 reductase family protein | HC | chr8:16926098-16922948 | 20130731
Soybean Glyma15g34620.1 491 79.1 86.5  
LJGI gnl|LJGI|TC58568 1673 99.2 99.2 similar to UniRef100_Q5PY86 Cluster: NADH:cytochrome b5 reductase; n=1; Vernicia fordii|Rep: NADH:cytochrome b5 reductase - Vernicia fordii (Tung) (Aleurites fordii), partial (84%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0004199.1 length: 296 aa.
IPR001433 Oxidoreductase FAD/NAD(P)-binding
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00175 NAD_binding_1 2.6e-27 173-280
IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00371 FPNCR 1.2e-06 172-191
210-221
266-274
IPR001834 NADH:cytochrome b5 reductase (CBR)
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00406 CYTB5RDTASE 8.1e-31 91-102
113-120
149-163
172-191
210-221
266-274
IPR008333 Oxidoreductase, FAD-binding domain
HMMPfam PF00970 FAD_binding_6 6.6e-31 65-163
IPR017927 Ferredoxin reductase-type FAD-binding domain
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51384 FAD_FR 14.770 60-164
IPR017938 Riboflavin synthase-like beta-barrel
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF63380 Riboflavin 6.6e-34 50-166
no_ID  
Gene3D G3DSA:2.40.30.10 no description 1.4e-34 56-151
Gene3D G3DSA:3.40.50.80 no description 3.9e-49 152-290
HMMPanther PTHR19370 NADH-CYTOCHROME 1.9e-125 33-296
HMMPanther PTHR19370:SF12 PUTATIVE 1.9e-125 33-296
Seg seg seg NA 29-45
superfamily SSF52343 Ferredoxin 4.6e-43 151-296
Putative transmembrane regions
  From To
TM segments
SOSUI		 27 48
Wolf-PSORT
Lj0g3v0004199.1	chlo 9, mito 3, nucl 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0004199.1