Miyakogusa Predicted Gene
- Lj0g3v0002849.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MMN7_SOYBN |
156 |
56.2 |
64.1 |
(tr|I1MMN7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G25597.1 |
47.8 |
46.4 |
66.1 |
| Symbols: | unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:9306103-9306585 FORWARD LENGTH=160 |
| Medicago |
Medtr8g069910.1 |
145 |
54.3 |
63.6 |
| transmembrane protein, putative | HC | chr8:29577920-29578946 | 20130731 |
| Soybean |
Glyma16g19200.1 |
156 |
56.2 |
64.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0002849.1 |
length: 148 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
16-36 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
9 |
30 |
- Wolf-PSORT
Lj0g3v0002849.1 chlo 6, cyto 2, extr 2, vacu 2, plas 1, E.R. 1, cyto_nucl 1, cyto_pero 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0002849.1 |
|