Miyakogusa Predicted Gene

Lj0g3v0002839.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9HWP7_POPTR 272 81.9 92.5 (tr|B9HWP7) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_658975 PE=4 SV=1
TAIR_pep AT1G18530.1 251 74.0 92.9 | Symbols: | EF hand calcium-binding protein family | chr1:6376783-6377256 FORWARD LENGTH=157
Medicago Medtr8g069915.1 300 91.9 95.6 | EF hand calcium-binding family protein | HC | chr8:29581888-29582574 | 20130731
Soybean Glyma16g19190.1 282 86.2 92.5  
LJGI gnl|LJGI|TC66055 940 99.4 99.4 similar to UniRef100_A7PGK7 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (93%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0002839.1 length: 161 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMSmart SM00054 EF-hand, 9.3e-06 12-40
48-76
87-115
123-151
ProfileScan PS50222 EF_HAND_2 12.812 8-43
44-79
83-118
119-154
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 4.3e-41 6-150
HMMPfam PF13499 EF_hand_5 2.7e-16 12-73
87-148
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 21-33
57-69
96-108
132-144
no_ID  
HMMPanther PTHR10891 EF-HAND 1.2e-88 7-158
HMMPanther PTHR10891:SF40 CALCIUM-BINDING 1.2e-88 7-158
superfamily SSF47473 EF-hand 4e-41 6-148
Wolf-PSORT
Lj0g3v0002839.1	nucl_plas 5.5, cyto 5, plas 5, nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0002839.1