Miyakogusa Predicted Gene
- Lj0g3v0002779.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C3TS13_CICAR |
497 |
68.9 |
80.3 |
(tr|C3TS13) S-adenosylmethionine decarboxylase proenzyme OS=Cicer arietinum PE=2 SV=1 |
| TAIR_pep |
AT3G25570.2 |
426 |
61.7 |
74.8 |
| Symbols: | Adenosylmethionine decarboxylase family protein | chr3:9287413-9288462 REVERSE LENGTH=349 |
| Medicago |
Medtr8g069905.1 |
527 |
71.4 |
83.1 |
| S-adenosylmethionine decarboxylase proenzyme | HC | chr8:29567630-29569929 | 20130731 |
| Soybean |
Glyma02g14180.1 |
494 |
67.4 |
79.1 |
|
| LJGI |
gnl|LJGI|BP045541 |
969 |
99.2 |
99.2 |
similar to UniRef100_Q9M4D8 Cluster: S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S- adenosylmethionine decarboxylase beta chain]; n=1; Vicia faba|Rep: S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S- adenosylmethionine decarboxylase beta chain] - Vicia faba (Broad bean), partial (43%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0002779.1 |
length: 357 aa. |
| IPR001985 |
S-adenosylmethionine decarboxylase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004014 |
adenosylmethionine decarboxylase activity |
|
|
| Biological Process |
GO:0006597 |
spermine biosynthetic process |
|
|
| Biological Process |
GO:0008295 |
spermidine biosynthetic process |
|
|
| HMMPanther |
PTHR11570 |
S-ADENOSYLMETHIONINE |
5.9e-125 |
4-350 |
| HMMPfam |
PF01536 |
SAM_decarbox |
1.2e-132 |
4-333 |
| IPR016067 |
S-adenosylmethionine decarboxylase, core |
| Molecular Function |
GO:0004014 |
adenosylmethionine decarboxylase activity |
|
|
| Biological Process |
GO:0008295 |
spermidine biosynthetic process |
|
|
| Gene3D |
G3DSA:3.60.90.10 |
no description |
6.7e-106 |
4-334 |
| superfamily |
SSF56276 |
S-adenosylmethionine |
2.7e-128 |
11-333 |
| IPR018166 |
S-adenosylmethionine decarboxylase, conserved site |
| Molecular Function |
GO:0004014 |
adenosylmethionine decarboxylase activity |
|
|
| PatternScan |
PS01336 |
ADOMETDC |
NA |
63-73 |
| IPR018167 |
S-adenosylmethionine decarboxylase subgroup |
| Molecular Function |
GO:0004014 |
adenosylmethionine decarboxylase activity |
|
|
| HMMPIR |
PIRSF001355 |
S-adenosylmethionine |
8.8e-121 |
1-340 |
| HMMTigr |
TIGR00535 |
SAM_DCase: |
9.4e-121 |
8-333 |
| no_ID |
|
| HMMPanther |
PTHR11570:SF0 |
SUBFAMILY |
5.9e-125 |
4-350 |
| Seg |
seg |
seg |
NA |
87-105 |
- Wolf-PSORT
Lj0g3v0002779.1 cyto 4, extr 4, nucl 3, chlo 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0002779.1 |
|