Miyakogusa Predicted Gene

Lj0g3v0002239.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7IZP1_MEDTR 875 81.0 88.8 (tr|G7IZP1) 2-succinylbenzoate-CoA ligase OS=Medicago truncatula GN=MTR_3g035130 PE=4 SV=1
TAIR_pep AT3G48990.1 745 73.3 84.5 | Symbols: | AMP-dependent synthetase and ligase family protein | chr3:18159031-18161294 REVERSE LENGTH=514
Medicago Medtr3g035130.1 875 81.0 88.8 | long-chain acyl-CoA synthetase | HC | chr3:12049974-12041832 | 20130731
Soybean Glyma09g25470.1 861 80.0 88.1  
LJGI gnl|LJGI|TC62659 3096 99.9 99.9 similar to UniRef100_A7QXF0 Cluster: Chromosome undetermined scaffold_222, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_222, whole genome shotgun sequence - Vitis vinifera (Grape), partial (94%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0002239.1 length: 521 aa.
IPR000873 AMP-dependent synthetase/ligase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00501 AMP-binding 1.3e-99 33-447
IPR020845 AMP-binding, conserved site
PatternScan PS00455 AMP_BINDING NA 174-185
IPR025110 Domain of unknown function DUF4009
HMMPfam PF13193 DUF4009 1.4e-10 488-515
no_ID  
Gene3D G3DSA:2.30.38.10 no description 1.3e-22 345-414
Gene3D G3DSA:3.30.300.30 no description 2.2e-28 418-516
Gene3D G3DSA:3.40.50.980 no description 3.4e-32 6-179
180-344
HMMPanther PTHR24095 FAMILY 1.6e-211 1-515
HMMPanther PTHR24095:SF32 SUBFAMILY 1.6e-211 1-515
Seg seg seg NA 79-89
superfamily SSF56801 Acetyl-CoA 8.4e-148 6-520
Wolf-PSORT
Lj0g3v0002239.1	cyto 6, chlo 3, cyto_nucl 3, cyto_pero 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0002239.1