Miyakogusa Predicted Gene

Lj0g3v0001909.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NE78_SOYBN 1024 86.0 91.4 (tr|I1NE78) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G48160.2 786 67.8 80.4 | Symbols: OBE2 | Protein of unknown function (DUF1423) | chr5:19528019-19529820 REVERSE LENGTH=574
Medicago Medtr5g097360.1 978 82.0 90.8 | potyviral VPg interacting protein | HC | chr5:42645832-42649703 | 20130731
Soybean Glyma20g14220.2 1024 86.0 91.4  
LJGI gnl|LJGI|TC69870 1869 97.2 97.2 similar to UniRef100_Q84N37 Cluster: Potyvirus VPg interacting protein; n=1; Pisum sativum|Rep: Potyvirus VPg interacting protein - Pisum sativum (Garden pea), partial (66%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0001909.1 length: 571 aa.
IPR001965 Zinc finger, PHD-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 0.0014 223-283
IPR004082 Protein of unknown function DUF1423, plant
FPrintScan PR01544 ARATH130DUF 8.9e-77 101-123
143-158
158-173
184-205
230-250
303-322
446-466
485-507
HMMPIR PIRSF025218 Uncharacterised 2e-261 1-571
HMMPfam PF07227 DUF1423 1.5e-211 91-550
no_ID  
Coil coil coiled-coil NA 417-487
HMMPanther PTHR21736 VERNALIZATION-INSENSITIVE 4.1e-295 1-566
HMMPanther PTHR21736:SF14 MLP3.23 4.1e-295 1-566
Seg seg seg NA 519-535
Wolf-PSORT
Lj0g3v0001909.1	nucl 7, chlo 3, cyto 2, E.R. 1, pero 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0001909.1