Miyakogusa Predicted Gene
- Lj0g3v0001899.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7J9J2_MEDTR |
305 |
92.9 |
96.8 |
(tr|G7J9J2) Thymidine kinase OS=Medicago truncatula GN=MTR_3g083230 PE=3 SV=1 |
| TAIR_pep |
AT3G07800.1 |
263 |
78.2 |
89.7 |
| Symbols: | Thymidine kinase | chr3:2489944-2490935 REVERSE LENGTH=238 |
| Medicago |
Medtr3g083230.1 |
305 |
92.9 |
96.8 |
| thymidine kinase-like protein | HC | chr3:37562472-37564655 | 20130731 |
| Soybean |
Glyma20g14210.1 |
282 |
82.6 |
93.5 |
|
| LJGI |
gnl|LJGI|BI419719 |
997 |
100.0 |
100.0 |
similar to UniRef100_A7Q347 Cluster: Thymidine kinase; n=1; Vitis vinifera|Rep: Thymidine kinase - Vitis vinifera (Grape), partial (66%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0001899.1 |
length: 168 aa. |
| IPR001267 |
Thymidine kinase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004797 |
thymidine kinase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| HMMPIR |
PIRSF035805 |
Thymidine |
2.5e-50 |
12-168 |
| HMMPanther |
PTHR11441 |
THYMIDINE |
9.4e-72 |
12-167 |
| HMMPfam |
PF00265 |
TK |
3.7e-43 |
13-167 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
2.4e-39 |
12-151 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
3-12 |
- Wolf-PSORT
Lj0g3v0001899.1 chlo 4.5, cyto 4, chlo_mito 4, mito 2.5, cyto_nucl 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0001899.1 |
|