Miyakogusa Predicted Gene

Lj0g3v0001859.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7KZX0_MEDTR 1076 70.6 79.3 (tr|G7KZX0) Receptor kinase OS=Medicago truncatula GN=MTR_7g009940 PE=4 SV=1
TAIR_pep AT4G08850.1 476 38.7 56.9 | Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr4:5636693-5640496 REVERSE LENGTH=1045
Medicago Medtr7g009940.1 1101 71.7 80.4 | LRR receptor-like kinase family protein | LC | chr7:2304580-2301483 | 20130731
Soybean Glyma18g49220.1 843 67.9 76.0  
LJGI gnl|LJGI|TC69011 65.9 84.3 84.3 similar to UniRef100_Q75WU3 Cluster: Leucine-rich repeat receptor-like protein kinase 1; n=1; Populus nigra|Rep: Leucine-rich repeat receptor-like protein kinase 1 - Populus nigra (Lombardy poplar), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0001859.1 length: 815 aa.
IPR000719 Protein kinase, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF00069 Pkinase 2.3e-49 525-790
ProfileScan PS50011 PROTEIN_KINASE_DOM 37.771 523-803
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.052 390-410
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 1e-40 523-792
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 1.1e+02 123-147
171-195
219-243
266-290
314-338
339-362
407-437
IPR008266 Tyrosine-protein kinase, active site
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
PatternScan PS00109 PROTEIN_KINASE_TYR NA 648-660
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 1e-73 493-799
IPR017441 Protein kinase, ATP binding site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00107 PROTEIN_KINASE_ATP NA 529-552
IPR020635 Tyrosine-protein kinase, catalytic domain
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00219 Tyrosine 2.7e-14 523-791
no_ID  
Gene3D G3DSA:1.10.510.10 no description 2.6e-41 589-798
Gene3D G3DSA:3.30.200.20 no description 2.9e-22 511-588
Gene3D G3DSA:3.80.10.10 no description 5.7e-72 96-429
HMMPanther PTHR24420 FAMILY 1.1e-240 101-795
HMMPanther PTHR24420:SF68 SUBFAMILY 1.1e-240 101-795
HMMPfam PF13516 LRR_6 1.2 123-140
266-282
HMMPfam PF13855 LRR_8 1.8e-08 292-351
Seg seg seg NA 450-460
466-485
superfamily SSF52047 RNI-like 1e-69 96-430
Putative transmembrane regions
  From To
TM segments
SOSUI
9 31
461 482
Wolf-PSORT
Lj0g3v0001859.1	plas 9, vacu 3, mito 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0001859.1