Miyakogusa Predicted Gene

Lj0g3v0001829.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JJR5_SOYBN 555 63.5 72.7 (tr|I1JJR5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G07810.1 399 48.8 64.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2492875-2495052 FORWARD LENGTH=494
Medicago Medtr5g097580.1 499 59.7 68.6 | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr5:42749843-42754792 | 20130731
Soybean Glyma02g47690.2 548 63.2 72.5  
LJGI gnl|LJGI|FS353484 254 100.0 100.0 weakly similar to UniRef100_A7Q348 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0001829.1 length: 453 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 2.1e-16 8-72
95-152
HMMSmart SM00360 RNA 4.6e-22 7-78
94-166
ProfileScan PS50102 RRM 16.483 6-82
93-170
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 2e-22 4-86
87-175
no_ID  
HMMPanther PTHR24012 FAMILY 6.8e-108 1-414
HMMPanther PTHR24012:SF27 SUBFAMILY 6.8e-108 1-414
Seg seg seg NA 285-297
301-313
superfamily SSF54928 RNA-binding 1.4e-21 87-189
4-91
Wolf-PSORT
Lj0g3v0001829.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0001829.1