Miyakogusa Predicted Gene
- Lj0g3v0001779.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NAJ0_SOYBN |
247 |
92.2 |
94.6 |
(tr|I1NAJ0) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT2G04842.1 |
218 |
79.1 |
88.4 |
| Symbols: EMB2761 | threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative | chr2:1698466-1701271 REVERSE LENGTH=650 |
| Medicago |
Medtr3g083180.1 |
247 |
90.7 |
94.6 |
| threonyl-tRNA synthetase/threonine-tRNA ligase, putative | HC | chr3:37534906-37529329 | 20130731 |
| Soybean |
Glyma19g37550.1 |
247 |
92.2 |
94.6 |
|
| LJGI |
gnl|LJGI|TC75498 |
757 |
99.5 |
99.5 |
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0001779.1 |
length: 129 aa. |
| IPR004154 |
Anticodon-binding |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.50.800 |
no description |
9.7e-31 |
28-120 |
| HMMPfam |
PF03129 |
HGTP_anticodon |
1.9e-19 |
33-120 |
| superfamily |
SSF52954 |
Class |
1.5e-26 |
21-120 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.930.10 |
no description |
2.3e-07 |
1-27 |
| HMMPanther |
PTHR11451 |
TRNA |
2.9e-48 |
1-120 |
| HMMPanther |
PTHR11451:SF5 |
THREONYL-TRNA |
2.9e-48 |
1-120 |
- Wolf-PSORT
Lj0g3v0001779.1 cyto 8, nucl 2, chlo 1, mito 1, cysk 1, golg 1, chlo_mito 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0001779.1 |
|