Miyakogusa Predicted Gene

Lj0g3v0000719.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F6HQE5_VITVI 447 40.0 58.1 (tr|F6HQE5) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00930 PE=4 SV=1
TAIR_pep AT5G39710.1 392 37.2 57.3 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 421 40.6 58.2 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma20g01300.1 313 42.4 53.5  
LJGI gnl|LJGI|TC63385 1947 99.9 99.9 weakly similar to UniRef100_Q8L7T0 Cluster: AT4g28010/T13J8_120; n=1; Arabidopsis thaliana|Rep: AT4g28010/T13J8_120 - Arabidopsis thaliana (Mouse-ear cress), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0000719.1 length: 645 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 7.6e-05 51-81
260-290
HMMPfam PF12854 PPR_1 5.4e-06 503-534
HMMPfam PF13041 PPR_2 4.5e-08 87-131
187-235
300-348
384-431
HMMPfam PF13812 PPR_3 0.00031 154-187
HMMTigr TIGR00756 PPR: 4.6e-05 52-85
87-120
156-188
190-223
225-258
261-293
303-337
509-540
ProfileScan PS51375 PPR 5.831 49-83
84-118
119-152
153-187
188-222
223-257
258-292
301-335
336-366
384-418
419-453
506-540
471-505
no_ID  
HMMPanther PTHR24015 FAMILY 4e-101 1-552
HMMPanther PTHR24015:SF0 SUBFAMILY 4e-101 1-552
Wolf-PSORT
Lj0g3v0000719.1	chlo 6, nucl 2, plas 2, vacu 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0000719.1