Miyakogusa Predicted Gene

Lj6g3v2271040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2271040.1 tr|P73219|P73219_SYNY3 Fibrillin OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll1568 PE=4
SV=,37.17,8e-19,seg,NULL; PAP_fibrillin,Plastid lipid-associated
protein/fibrillin conserved domain,CUFF.60947.1
         (245 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g007300.1 | plastid lipid-associated protein | HC | chr2:9...   360   e-100
Medtr2g007640.1 | plastid lipid-associated protein | HC | chr2:1...   266   1e-71
Medtr2g007640.2 | plastid lipid-associated protein | HC | chr2:1...   224   7e-59
Medtr2g007640.3 | plastid lipid-associated protein | HC | chr2:1...   114   1e-25
Medtr8g092680.1 | plastid lipid-associated protein | HC | chr8:3...    62   7e-10
Medtr1g075660.1 | plastid fibrillin | HC | chr1:33526397-3352887...    59   4e-09
Medtr1g116320.1 | plastid lipid-associated protein | HC | chr1:5...    54   1e-07

>Medtr2g007300.1 | plastid lipid-associated protein | HC |
           chr2:939354-936228 | 20130731
          Length = 243

 Score =  360 bits (923), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/246 (76%), Positives = 203/246 (82%), Gaps = 4/246 (1%)

Query: 1   MAXXXXXXXXXXNTTDTDFHPKLLHFNLPXXXXXXHFPVRFPIYHTSHSLA-ISEKWRAK 59
           MA          NTT+   H KLLH  +P      HF +  P+ H +H+LA IS+KWR  
Sbjct: 1   MALSSTSLISPLNTTNHS-HQKLLHSPIPSSYSSSHFLIT-PLIHHNHNLATISQKWRTN 58

Query: 60  VSFFPAFLNNKRKDASTIKQELLDAIAPLDRGADATLEDQQTIDQIARKLEAVNPTKNPL 119
           VSFFPA    K KDASTIK+ELLDAIA LDRGADAT EDQQ++DQIAR+LEAVNPTK PL
Sbjct: 59  VSFFPAIFK-KGKDASTIKEELLDAIASLDRGADATPEDQQSVDQIARQLEAVNPTKQPL 117

Query: 120 KSNLLDGKWELIYTTSQSILQTKRPKLLRSVTNYQAINADTLRAQNMESWPFFNQVTADL 179
           KS+LLDGKWELIYTTSQSILQTKRPKLLRSVTNYQAINADTLRAQNMES PFFNQVTADL
Sbjct: 118 KSSLLDGKWELIYTTSQSILQTKRPKLLRSVTNYQAINADTLRAQNMESGPFFNQVTADL 177

Query: 180 TPVNTRKVAVKFDTFKIAGFIPVKAPETARGSLEITYLDEELRVSRGDKGNLFILKMVDP 239
           TP+N +KVAVKFDTFKI G IPVKAP+TARG LEITYLDEELRVSRGDKGNLFILKMVDP
Sbjct: 178 TPINAKKVAVKFDTFKIGGLIPVKAPDTARGELEITYLDEELRVSRGDKGNLFILKMVDP 237

Query: 240 TYRVPV 245
           +YRVPV
Sbjct: 238 SYRVPV 243


>Medtr2g007640.1 | plastid lipid-associated protein | HC |
           chr2:1048874-1052079 | 20130731
          Length = 248

 Score =  266 bits (680), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 130/201 (64%), Positives = 158/201 (78%), Gaps = 2/201 (0%)

Query: 47  SHSLAISEKWRAKVSFFPAFLNNKR-KDASTIKQELLDAIAPLDRGADATLEDQQTIDQI 105
           S   A S KWR  VS F  FL   R  D  ++K EL + I PL+RGA+AT EDQQ +D+I
Sbjct: 48  SSVAADSAKWRNMVSIFQGFLTGGRGNDVESLKVELYETIEPLERGAEATPEDQQRVDKI 107

Query: 106 ARKLEAVNPTKNPLKSNLLDGKWELIYTTSQSILQTKRPKLLRSVTN-YQAINADTLRAQ 164
           ARKLEA+N  K PL S+LL+GKWEL+YTTSQSILQT+RPK LR     YQAIN DTLRAQ
Sbjct: 108 ARKLEAMNSVKEPLNSDLLNGKWELLYTTSQSILQTQRPKFLRPNGKIYQAINTDTLRAQ 167

Query: 165 NMESWPFFNQVTADLTPVNTRKVAVKFDTFKIAGFIPVKAPETARGSLEITYLDEELRVS 224
           N+E+WPF+NQ TA+L P+N+R+VAVKFD FKIA  IP+K+  + RG LEITYLDE+LR+S
Sbjct: 168 NIETWPFYNQATANLVPLNSRRVAVKFDFFKIASLIPIKSSGSGRGQLEITYLDEDLRIS 227

Query: 225 RGDKGNLFILKMVDPTYRVPV 245
           RG++GNLFILKMVDP+YRVP+
Sbjct: 228 RGNRGNLFILKMVDPSYRVPL 248


>Medtr2g007640.2 | plastid lipid-associated protein | HC |
           chr2:1048898-1052079 | 20130731
          Length = 225

 Score =  224 bits (570), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 112/178 (62%), Positives = 135/178 (75%), Gaps = 2/178 (1%)

Query: 47  SHSLAISEKWRAKVSFFPAFLNNKR-KDASTIKQELLDAIAPLDRGADATLEDQQTIDQI 105
           S   A S KWR  VS F  FL   R  D  ++K EL + I PL+RGA+AT EDQQ +D+I
Sbjct: 48  SSVAADSAKWRNMVSIFQGFLTGGRGNDVESLKVELYETIEPLERGAEATPEDQQRVDKI 107

Query: 106 ARKLEAVNPTKNPLKSNLLDGKWELIYTTSQSILQTKRPKLLRSVTN-YQAINADTLRAQ 164
           ARKLEA+N  K PL S+LL+GKWEL+YTTSQSILQT+RPK LR     YQAIN DTLRAQ
Sbjct: 108 ARKLEAMNSVKEPLNSDLLNGKWELLYTTSQSILQTQRPKFLRPNGKIYQAINTDTLRAQ 167

Query: 165 NMESWPFFNQVTADLTPVNTRKVAVKFDTFKIAGFIPVKAPETARGSLEITYLDEELR 222
           N+E+WPF+NQ TA+L P+N+R+VAVKFD FKIA  IP+K+  + RG LEITYLDE+LR
Sbjct: 168 NIETWPFYNQATANLVPLNSRRVAVKFDFFKIASLIPIKSSGSGRGQLEITYLDEDLR 225


>Medtr2g007640.3 | plastid lipid-associated protein | HC |
           chr2:1048874-1052079 | 20130731
          Length = 174

 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 69/93 (74%), Gaps = 1/93 (1%)

Query: 51  AISEKWRAKVSFFPAFLNNKR-KDASTIKQELLDAIAPLDRGADATLEDQQTIDQIARKL 109
           A S KWR  VS F  FL   R  D  ++K EL + I PL+RGA+AT EDQQ +D+IARKL
Sbjct: 52  ADSAKWRNMVSIFQGFLTGGRGNDVESLKVELYETIEPLERGAEATPEDQQRVDKIARKL 111

Query: 110 EAVNPTKNPLKSNLLDGKWELIYTTSQSILQTK 142
           EA+N  K PL S+LL+GKWEL+YTTSQSILQT+
Sbjct: 112 EAMNSVKEPLNSDLLNGKWELLYTTSQSILQTQ 144


>Medtr8g092680.1 | plastid lipid-associated protein | HC |
           chr8:38786802-38784455 | 20130731
          Length = 265

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 32/186 (17%)

Query: 78  KQELLDAIAPLDRGADATLEDQQ-TIDQIARKLEAVNPTKNP-LKSNLLDGKWELIYTTS 135
           K+EL  A+  ++RG       ++  I+ + ++LE+ NPT  P L+   +DG W L+Y+T 
Sbjct: 76  KRELYQALEGINRGIFGIPSGKKLEIETLVKQLESQNPTPEPTLELEKVDGCWRLVYSTI 135

Query: 136 QSILQTKRPKL-LRSV------------TNYQAINADTLRAQNMESWPFFNQVTADLTPV 182
            SIL ++R KL LR              T  +A+N     A+ +        + A     
Sbjct: 136 -SILGSRRTKLGLRDFIALGDFFQIIDKTKSKAVNVIKFNAKGLILLCGELSIEASFKIA 194

Query: 183 NTRKVAVKFDTFKIAG-------------FIPVKAPETARGSLEITYLDEELRVSRGDKG 229
           +  +V + F+   I                + +  PE   G LEITY+D+++R+ R DKG
Sbjct: 195 SRTRVDINFENSTITPDQLMNVFRKNYDILLGIFNPE---GWLEITYVDDKMRIGRDDKG 251

Query: 230 NLFILK 235
           N+F+L+
Sbjct: 252 NIFVLE 257


>Medtr1g075660.1 | plastid fibrillin | HC | chr1:33526397-33528879 |
           20130731
          Length = 276

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 39/202 (19%)

Query: 68  NNKRKDASTIKQELLDAIAPLDRGADATLEDQQTIDQIARKLEAVNPTKNPLKSNL--LD 125
           +N     S +K  LL A++ L+RG  A+ ED Q  D  A++LE      + L  NL  L 
Sbjct: 70  SNPFDSTSPLKFNLLSAVSGLNRGLAASEEDLQKADAAAKELEDAGGLVD-LTDNLDRLQ 128

Query: 126 GKWELIYTT--SQSILQTKRPK----LLRSVTNYQAINADTLRAQNMES---------WP 170
           G+W+LIY++  S   L   RP      L  +T  Q      + +++ ++         WP
Sbjct: 129 GRWKLIYSSAFSSRTLGGSRPGPPIGRLLPITLGQVFQRIDILSKDFDNIVDLQLGAPWP 188

Query: 171 FFN-QVTADLTP----VNTRKVAVKFD--TFKIAGF-----------IP-VKAPETARGS 211
               +VTA L      V + K+ + F+  T K  G            IP    P++ RGS
Sbjct: 189 LPPLEVTATLAHKFELVGSSKIKIIFEKTTVKTTGTFSQLPPLDLPQIPDALRPQSNRGS 248

Query: 212 --LEITYLDEELRVSRGDKGNL 231
              E+TYLD + RV+RGD+G L
Sbjct: 249 GDFEVTYLDADTRVTRGDRGEL 270


>Medtr1g116320.1 | plastid lipid-associated protein | HC |
           chr1:52579521-52576407 | 20130731
          Length = 388

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 54/195 (27%)

Query: 78  KQELLDAIAPL-DRGADATLEDQQTIDQIARKLEAVNPTKNPLKSNLLDGKWELIYTT-- 134
           +  L+ A+  +  RG  ++ +    I++  + LE +    +P  S+L++G+W+LI+TT  
Sbjct: 53  ENSLIQALVGIQGRGRSSSPQQLNAIERAIQVLEHIGGVSDPTNSSLIEGRWQLIFTTRP 112

Query: 135 -------------------SQSILQTKRPKLLRSVTNYQAINADTLRAQNMESWPFFNQV 175
                               +  LQT  P++   V+   AI                 +V
Sbjct: 113 GTASPIQRTFVGVDFFSVFQEVYLQTNDPRVTNIVSFSDAIGEL--------------KV 158

Query: 176 TADLTPVNTRKVAVKFD----TFKIAGFIPVKAP---------ETARGSLEITYLDEE-- 220
            A  +  + +++  +FD    +FK   F+P K P         + A+G L+ TYL     
Sbjct: 159 EAAASIGDGKRILFRFDRAAFSFK---FLPFKVPYPVPFKLLGDEAKGWLDTTYLSHSGN 215

Query: 221 LRVSRGDKGNLFILK 235
           LR+SRG+KG  F+L+
Sbjct: 216 LRISRGNKGTTFVLQ 230