Miyakogusa Predicted Gene

Lj6g3v2271040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2271040.1 tr|P73219|P73219_SYNY3 Fibrillin OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll1568 PE=4
SV=,37.17,8e-19,seg,NULL; PAP_fibrillin,Plastid lipid-associated
protein/fibrillin conserved domain,CUFF.60947.1
         (245 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G26070.1 | Symbols:  | Plastid-lipid associated protein PAP /...   276   9e-75
AT3G26080.1 | Symbols:  | plastid-lipid associated protein PAP /...   248   3e-66
AT5G19940.1 | Symbols:  | Plastid-lipid associated protein PAP /...    55   4e-08
AT1G51110.1 | Symbols:  | Plastid-lipid associated protein PAP /...    53   2e-07
AT3G23400.1 | Symbols: FIB4 | Plastid-lipid associated protein P...    49   3e-06

>AT3G26070.1 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr3:9526904-9528199 FORWARD
           LENGTH=242
          Length = 242

 Score =  276 bits (706), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 129/191 (67%), Positives = 160/191 (83%), Gaps = 2/191 (1%)

Query: 57  RAKVSFFPAFL--NNKRKDASTIKQELLDAIAPLDRGADATLEDQQTIDQIARKLEAVNP 114
           +A  SF PAFL  N + +    +KQELL+AI PL+RGA A+ +DQ  IDQ+ARK+EAVNP
Sbjct: 52  QAIFSFPPAFLTRNGRAEKQKQLKQELLEAIEPLERGATASPDDQLRIDQLARKVEAVNP 111

Query: 115 TKNPLKSNLLDGKWELIYTTSQSILQTKRPKLLRSVTNYQAINADTLRAQNMESWPFFNQ 174
           TK PLKS+L++GKWELIYTTS SILQ K+P+ LRS+TNYQ+IN DTL+ QNME+WPF+N 
Sbjct: 112 TKEPLKSDLVNGKWELIYTTSASILQAKKPRFLRSITNYQSINVDTLKVQNMETWPFYNS 171

Query: 175 VTADLTPVNTRKVAVKFDTFKIAGFIPVKAPETARGSLEITYLDEELRVSRGDKGNLFIL 234
           VT D+ P+N++KVAVK   FKI GFIP+KAP++ARG LEITY+DEELR+SRGDKGNLFIL
Sbjct: 172 VTGDIKPLNSKKVAVKLQVFKILGFIPIKAPDSARGELEITYVDEELRLSRGDKGNLFIL 231

Query: 235 KMVDPTYRVPV 245
           KM DPTYR+P+
Sbjct: 232 KMFDPTYRIPL 242


>AT3G26080.1 | Symbols:  | plastid-lipid associated protein PAP /
           fibrillin family protein | chr3:9528998-9530404 FORWARD
           LENGTH=234
          Length = 234

 Score =  248 bits (632), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 122/194 (62%), Positives = 151/194 (77%), Gaps = 3/194 (1%)

Query: 54  EKWRAKVSF-FPAFLNNKRKDASTIKQELLDAIAPLDRGADATLEDQQTIDQIARKLEAV 112
           E+ R +  F FP   N   +    +K EL++AI PL+RGA A+ +DQ  IDQ+ARK+EAV
Sbjct: 42  ERLRIQAVFSFPP-RNGGAEKRKQLKHELVEAIEPLERGATASPDDQLLIDQLARKVEAV 100

Query: 113 NPTKNPLKSNLLDGKWELIYTTSQSILQTKRPKLLRSVTNYQAINADTLRAQNMESWPFF 172
           NPTK PLKS+L++GKWELIYTTS +ILQ K+P+ LRS+TNYQ IN DTL+ Q ME+WPF+
Sbjct: 101 NPTKEPLKSDLINGKWELIYTTSAAILQAKKPRFLRSLTNYQCINMDTLKVQRMETWPFY 160

Query: 173 NQVTADLTPVNTRKVAVKFDTFKIAGFIPVKAPE-TARGSLEITYLDEELRVSRGDKGNL 231
           N VT DLTP+N++ VAVK   FKI GFIPVKAP+ TARG LEITY+DEELR+SRG    L
Sbjct: 161 NSVTGDLTPLNSKTVAVKLQVFKILGFIPVKAPDGTARGELEITYVDEELRISRGKGNLL 220

Query: 232 FILKMVDPTYRVPV 245
           FILKM DPTYR+P+
Sbjct: 221 FILKMFDPTYRIPL 234


>AT5G19940.1 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr5:6739693-6740661 FORWARD
           LENGTH=239
          Length = 239

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 20/170 (11%)

Query: 81  LLDAIAPLDRGADATLEDQQTIDQIARKLEAVNPTKNPLKSNLLDGKWELIYTTSQSILQ 140
           LL  +A  D G   + E  + + Q+A +L+     K P+K+ L+ G WE++Y +      
Sbjct: 72  LLSKVANSDGGVTLSPEQHKEVAQVAGELQKYC-VKEPVKNPLIFGDWEVVYCSRP---- 126

Query: 141 TKRPKLLRSVTN---------YQAINA-DTLRAQ-NMESWPFFN---QVTADLTPVNTRK 186
           T      RSV            QAI+A D +R + ++ ++ F +    +T  L  +++  
Sbjct: 127 TSPGGGYRSVIGRLFFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDVSLTGKLKALDSEW 186

Query: 187 VAVKFDTFKI-AGFIPVKAPETARGSLEITYLDEELRVSRGDKGNLFILK 235
           V V F+  +I  G +  K    +   L ITY+DE+LR+  G KG+LF+ +
Sbjct: 187 VQVIFEPPEIKVGSLEFKYGFESEVKLRITYVDEKLRLGLGSKGSLFVFR 236


>AT1G51110.1 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr1:18935380-18937484
           FORWARD LENGTH=409
          Length = 409

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 29/181 (16%)

Query: 80  ELLDAIAPL-DRGADATLEDQQTIDQIARKLEAVNPTKNPLKSNLLDGKWELIYTTSQSI 138
           +L+DA+  +  RG  A+ +    ++   + LE +   +NP  S+L++G+W L++TT    
Sbjct: 77  KLIDALIGIQGRGKSASPKQLNDVESAVKVLEGLEGIQNPTDSDLIEGRWRLMFTTRPG- 135

Query: 139 LQTKRP--KLLRSVTNYQAINADTLRAQN-------MESWPFFNQ--VTADLTPVNTRKV 187
             T  P  +    V  +       L+A N       ++   F  +  V A  +  + ++V
Sbjct: 136 --TASPIQRTFTGVDVFTVFQDVYLKATNDPRVSNIVKFSDFIGELKVEAVASIKDGKRV 193

Query: 188 AVKFD--TFKIAGFIPVKAP---------ETARGSLEITYL--DEELRVSRGDKGNLFIL 234
             +FD   F +  F+P K P         + A+G L+ TYL     LR+SRG+KG  F+L
Sbjct: 194 LFRFDRAAFDLK-FLPFKVPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVL 252

Query: 235 K 235
           +
Sbjct: 253 Q 253


>AT3G23400.1 | Symbols: FIB4 | Plastid-lipid associated protein PAP
           / fibrillin family protein | chr3:8376636-8378225
           REVERSE LENGTH=284
          Length = 284

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 41/186 (22%)

Query: 88  LDRGADATLEDQQTIDQIARKLE-AVNPTKNPLKSNLLDGKWELIYTT--SQSILQTKRP 144
           L+RG  A+++D +  +  A++LE A  P       + L GKW L+Y++  S   L   RP
Sbjct: 98  LNRGLVASVDDLERAEVAAKELETAGGPVDLTDDLDKLQGKWRLLYSSAFSSRSLGGSRP 157

Query: 145 KL----LRSVTNYQAINADTLRAQNMES---------WPFFN-QVTADLTP----VNTRK 186
            L    L  VT  Q      + +++ ++         WPF   + TA L      + T K
Sbjct: 158 GLPTGRLIPVTLGQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATATLAHKFELLGTCK 217

Query: 187 VAVKFD--TFKIAG----------------FIPVKAPETARGSLEITYLDEELRVSRGDK 228
           + + F+  T K +G                F P   P T  G  E+TY+D+ +R++RGD+
Sbjct: 218 IKITFEKTTVKTSGNLSQIPPFDIPRLPDSFRPSSNPGT--GDFEVTYVDDTMRITRGDR 275

Query: 229 GNLFIL 234
           G L + 
Sbjct: 276 GELRVF 281