Miyakogusa Predicted Gene

Lj6g3v2193610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2193610.1 Non Chatacterized Hit- tr|K4DGL0|K4DGL0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.36,4e-18,seg,NULL; PROKAR_LIPOPROTEIN,NULL,CUFF.60787.1
         (349 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64340.1 | Symbols: SAC51 | sequence-specific DNA binding tra...    87   2e-17
AT5G09460.1 | Symbols:  | sequence-specific DNA binding transcri...    80   2e-15

>AT5G64340.1 | Symbols: SAC51 | sequence-specific DNA binding
           transcription factors;transcription regulators |
           chr5:25730890-25731936 REVERSE LENGTH=348
          Length = 348

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 113/248 (45%), Gaps = 46/248 (18%)

Query: 101 QKKLLIVDQSGTNTRLFYSPV---FP-HVPSPIVTATQFA---QAYDVNGERWAANIGQK 153
           QK+LLI DQSG  TRL   P    FP H  +  V  ++     +A+  +GE +  + G +
Sbjct: 97  QKRLLIFDQSGDQTRLLQCPFPLRFPSHAAAEPVKLSELQGIEKAFKEDGEEFHKSDGTE 156

Query: 154 HLPKYNLPEESDKDHIVNEGSEMHEDTKEINALLYXXXXXXXXXXXXXXXXXXXXPLVAN 213
                               SEMHEDT+EINALLY                        N
Sbjct: 157 --------------------SEMHEDTEEINALLYSDDDYDDDCESDDEVMSTGHSPYPN 196

Query: 214 RTFMMQEQFEDTKEEVASSDCPNKRRKLIS--GGYKRLPSPVDSAISVRLNETG--EDVS 269
                + + E+        D P KR+KL+        L S V +  S +LN +   +D  
Sbjct: 197 EGVCNKRELEEI-------DGPCKRQKLLDKVNNISDLSSLVGTESSTQLNGSSFLKDKK 249

Query: 270 DAESRYSSDQVYSARGTKEDDSIIVGDIQLKKDKIRESLRVLENLIPGAKGKHPLLVIDD 329
             ES+  S        TKED    + + Q KKDKIR +L++LE+++PGAKG   LL++D+
Sbjct: 250 LPESKTIS--------TKEDTGSGLSNEQSKKDKIRTALKILESVVPGAKGNEALLLLDE 301

Query: 330 TIDYLQSL 337
            IDYL+ L
Sbjct: 302 AIDYLKLL 309


>AT5G09460.1 | Symbols:  | sequence-specific DNA binding
           transcription factors;transcription regulators |
           chr5:2944437-2945417 REVERSE LENGTH=326
          Length = 326

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 40/257 (15%)

Query: 101 QKKLLIVDQSGTNTRLFYSPVFPHVPSPIVTATQFAQAYDVNGERW-AANIGQKHLPKYN 159
           +K+ ++ DQSG  TRL         PS +      A+  ++ G         + H  +  
Sbjct: 92  RKRFIVFDQSGEQTRLLQCGFPLRFPSSMD-----AERGNILGALHPEKGFSKDHAIQEK 146

Query: 160 LPEESDKDHIVNEGSEMHEDTKEINALLYXXXXXXXXXXXXXXXXXXXXPLVANRTFMMQ 219
           + +  D ++   E SEMHEDT+EINALLY                        +  F ++
Sbjct: 147 ILQHEDHEN-GEEDSEMHEDTEEINALLYSDDDDNDDWESDDEVMS-----TGHSPFTVE 200

Query: 220 EQF-----EDTKEEVASSDCPN-KRRKLISGGYKRLPSPVDSAISVRLNETGEDVSDA-- 271
           +Q      E+  E  ++ D P  KR+KL+   Y+      DS+ S+      + +SD   
Sbjct: 201 QQACNITTEELDETESTVDGPLLKRQKLLDHSYR------DSSPSLVGTTKVKGLSDENL 254

Query: 272 -ESRYSSDQVYSARGTKEDDSIIVGDIQLKKDKIRESLRVLENLIPGAKGKHPLLVIDDT 330
            ES  SS         K++    + D Q +KDKI  +LR+LE+++PGAKGK  LL++D+ 
Sbjct: 255 PESNISS---------KQETGSGLSDEQSRKDKIHTALRILESVVPGAKGKEALLLLDEA 305

Query: 331 IDYL----QSLMSHKGI 343
           IDYL    QSL S KG+
Sbjct: 306 IDYLKLLKQSLNSSKGL 322