Miyakogusa Predicted Gene

Lj6g3v2193470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2193470.1 Non Chatacterized Hit- tr|C3ZRS5|C3ZRS5_BRAFL
Putative uncharacterized protein OS=Branchiostoma
flor,36.94,3e-19,HAD-like,HAD-like domain; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,Magnesium-dependent phosphatase,CUFF.60869.1
         (192 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G14110.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...   287   3e-78

>AT2G14110.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr2:5952005-5953002 FORWARD
           LENGTH=190
          Length = 190

 Score =  287 bits (735), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 129/184 (70%), Positives = 158/184 (85%)

Query: 5   ATEKVKAEAVQKIESFEVLPKLVVFDLDYTLWPFYCECRSKRETPSLYPHAKGILMALKQ 64
           A EKVK EA+Q +  F++LP+LVVFDLDYTLWPFYCECRSKRE PS+YP AKGIL ALK+
Sbjct: 2   AEEKVKDEAMQIMGMFQILPRLVVFDLDYTLWPFYCECRSKREMPSMYPQAKGILSALKE 61

Query: 65  KGIDVAIASRSPTSDIANAFLNKLNLNSMFVAKEIFSSWTHKTDHFHRIHSTTGVPFSSM 124
           KGI++AIASRSPTSDIAN FL+KLN+  MFVAKEI+SSW+HKT+HF +IH+ TGVPF++M
Sbjct: 62  KGIEMAIASRSPTSDIANTFLDKLNIKPMFVAKEIYSSWSHKTEHFQKIHTRTGVPFTAM 121

Query: 125 LFFDDENRNIQAVSKMGVTSILVGNGVNLGSLTEGLAQFARNWNASQKNKQKWLTDYSNK 184
           LFFDDE+RNI++VSKMGVTSILVG+GV LG+  +GL +F +N N+ +KNKQ W   YS K
Sbjct: 122 LFFDDEDRNIKSVSKMGVTSILVGDGVTLGAFRQGLTEFTQNHNSIEKNKQVWRDKYSGK 181

Query: 185 PNTS 188
           P +S
Sbjct: 182 PTSS 185