Miyakogusa Predicted Gene

Lj6g3v2116870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2116870.1 tr|A9RNP3|A9RNP3_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,27.27,0.0000000000008,seg,NULL; A_thal_Cys_rich:
uncharacterized Cys-rich domain,Uncharacterised protein family
Cys-rich; ,CUFF.60673.1
         (255 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G11380.1 | Symbols:  | PLAC8 family protein | chr1:3832695-38...   261   5e-70
AT5G05350.1 | Symbols:  | PLAC8 family protein | chr5:1585757-15...    63   2e-10
AT1G52200.1 | Symbols:  | PLAC8 family protein | chr1:19442271-1...    61   7e-10
AT3G18470.1 | Symbols:  | PLAC8 family protein | chr3:6335000-63...    57   1e-08
AT3G10980.1 | Symbols:  | PLAC8 family protein | chr3:3438810-34...    56   2e-08
AT2G40935.1 | Symbols:  | PLAC8 family protein | chr2:17083199-1...    55   4e-08
AT1G14870.1 | Symbols: PCR2 | PLANT CADMIUM RESISTANCE 2 | chr1:...    52   5e-07
AT3G18450.1 | Symbols:  | PLAC8 family protein | chr3:6331229-63...    52   5e-07
AT1G14880.1 | Symbols: PCR1 | PLANT CADMIUM RESISTANCE 1 | chr1:...    52   6e-07

>AT1G11380.1 | Symbols:  | PLAC8 family protein |
           chr1:3832695-3833921 FORWARD LENGTH=254
          Length = 254

 Score =  261 bits (666), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 122/216 (56%), Positives = 157/216 (72%), Gaps = 6/216 (2%)

Query: 30  GMEDLDFDMLCSSVAMQTANGTWGKLG---GTFRDEEQHLGVAGVFRMWEGELLDCFDDR 86
           G+  LDFD+LCS+VA+QT  G W KL    G    E+ + G  GV R+WEG+++DCF+DR
Sbjct: 41  GISVLDFDLLCSTVALQT-QGKWRKLESSEGEDATEDDYGG--GVLRLWEGDVMDCFEDR 97

Query: 87  RIALESACCPCYRFGKNMKRAGFGSCFIQAVVYFLLANGAVLNFIAFTVTRRHYSPYLGI 146
            + +ESACCPCYRFGKNM R GFGSCF+Q  V+ +L  G + N +AF VT+RH   YL I
Sbjct: 98  HLCIESACCPCYRFGKNMTRTGFGSCFLQGAVHMILIAGFLFNVVAFAVTKRHCFLYLAI 157

Query: 147 AFIITVGAYLGFYRTRVRKKFNIKGSDSSLDDCVYHFICPCCTLCQESRTLEMNNVQDGT 206
           AF++ +G+YLGF+R  +R+KFNI+G+DS LDD ++H +CP CTL QES+TLEMNNV DG 
Sbjct: 158 AFVLLIGSYLGFFRMLIRRKFNIRGTDSFLDDFIHHLVCPFCTLTQESKTLEMNNVHDGI 217

Query: 207 WHGRGDTICIGGYRDGSKALTELSPPSIETIKHSDQ 242
           WHGRGDT+CIGGY +G   L   SPP I +   S Q
Sbjct: 218 WHGRGDTLCIGGYSEGKAFLELHSPPVIASTMSSSQ 253


>AT5G05350.1 | Symbols:  | PLAC8 family protein |
           chr5:1585757-1587337 FORWARD LENGTH=526
          Length = 526

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 10/132 (7%)

Query: 75  WEGELLDCFDDRRIALESACCPCYRFGKNMKRAGFGSCF--IQAVVYFLLANGAVLNFIA 132
           W   +LD ++D  +A  S  C    FG NM+R GFG+ +  I   V F LA   + N  A
Sbjct: 307 WREGVLDIWEDISLAYLSLFCTFCLFGWNMERIGFGNMYVHIATFVLFCLAPFFIFNLAA 366

Query: 133 FTVTR---RHYSPYLGIAFIITVGAYLGFYRTRVRKKFNIKGSD-----SSLDDCVYHFI 184
             +     R    Y GI   +    Y GF+R ++RK+F + G +      ++ DC     
Sbjct: 367 INIDNEMVRDALGYTGIVLCLFGLLYGGFWRIQMRKRFKLPGYNICCGRPAIADCTLWLF 426

Query: 185 CPCCTLCQESRT 196
           C  C+L QE RT
Sbjct: 427 CCWCSLAQEVRT 438


>AT1G52200.1 | Symbols:  | PLAC8 family protein |
           chr1:19442271-19443407 REVERSE LENGTH=190
          Length = 190

 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 28/142 (19%)

Query: 71  VFRMWEGELLDCFDDRRIALESACCPCYRFGK--NMKRAGFGSCFIQAVVYFLLANGAVL 128
           V R W   L DC  D+  A+ +   PC  FG+   +   G  +C +   +Y L+      
Sbjct: 49  VGRPWSTGLFDCQADQANAVLTTIVPCVTFGQIAEVMDEGEMTCPLGTFMYLLMMPALCS 108

Query: 129 NFIAFTVTRRHYSPYLGIAFIITVGAYLGFYRTRVRKKFNIKGSDSSLDDCVYHFICPCC 188
           +++  +                        YR ++R+KFN+   ++   DC  H +CPCC
Sbjct: 109 HWVMGSK-----------------------YREKMRRKFNL--VEAPYSDCASHVLCPCC 143

Query: 189 TLCQESRTLEMNNVQDGT-WHG 209
           +LCQE R L++ N+     W+G
Sbjct: 144 SLCQEYRELKIRNLDPSLGWNG 165


>AT3G18470.1 | Symbols:  | PLAC8 family protein |
           chr3:6335000-6335698 REVERSE LENGTH=133
          Length = 133

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 58/143 (40%), Gaps = 34/143 (23%)

Query: 73  RMWEGELLDCFDDRRIALESACCPCYRFGK-----NMKRAGFGSCFIQAVVYFLLANGAV 127
           + W   L  C +D   A  +  CPC  FG+     +  R G G C    V Y L+     
Sbjct: 3   KQWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRC---GVFYGLICCVVG 59

Query: 128 LNFIAFTVTRRHYSPYLGIAFIITVGAYLGFYRTRVRKKFNIKGSDSSLDDCVYHFICPC 187
           L  + F+ T                      YRT++R KF +  S +S  DCV HF C C
Sbjct: 60  LPCL-FSCT----------------------YRTKIRSKFGLPESPTS--DCVTHFFCEC 94

Query: 188 CTLCQESRTLEMNNVQDGT-WHG 209
           C LCQE R L+   +     W G
Sbjct: 95  CALCQEHRELKTRGLDPSIGWSG 117


>AT3G10980.1 | Symbols:  | PLAC8 family protein |
           chr3:3438810-3440501 FORWARD LENGTH=563
          Length = 563

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 10/132 (7%)

Query: 75  WEGELLDCFDDRRIALESACCPCYRFGKNMKRAGFGSCFIQAVVYFL--LANGAVLNFIA 132
           W G +LD +DD  +A  S  C    FG NM+R GFG+ ++    + L  LA   + N  A
Sbjct: 336 WSGGILDIWDDISLAYLSLFCTFCVFGWNMERVGFGNMYVHIATFILFCLAPFFIFNLAA 395

Query: 133 FTVTRRHYSPYLGIAFIITVG---AYLGFYRTRVRKKFNIKGSD-----SSLDDCVYHFI 184
             +        LGI+ I+       Y GF+R ++RK+F +   +     +++ DC     
Sbjct: 396 VNIDNETVREALGISGILLCVFGLLYGGFWRIQMRKRFKLPSYNFCFGRAAIADCALWLC 455

Query: 185 CPCCTLCQESRT 196
           C  C+L QE RT
Sbjct: 456 CCWCSLAQEVRT 467


>AT2G40935.1 | Symbols:  | PLAC8 family protein |
           chr2:17083199-17084216 FORWARD LENGTH=190
          Length = 190

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 73  RMWEGELLDCFDDRRIALESACCPCYRFGKNMKRAGFGS----CFIQAVVYFLLANGAVL 128
           R W   +  CFDD +       CPCY FGKN +  G G+    C    + +      A++
Sbjct: 45  RQWSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSGTFAGPCLTHCISW------ALV 98

Query: 129 NFIAFTVTRRHYSPYLGIAFIITVGAYLGFYRTRVRKKFNIKGSDSSLDDCVYHFICPCC 188
           N I    T       LG+     V  Y   YR  +R K+N++  ++   D V HF C  C
Sbjct: 99  NTICCFATN---GALLGLPGCF-VSCYACGYRKSLRAKYNLQ--EAPCGDFVTHFFCHLC 152

Query: 189 TLCQESRTL 197
            +CQE R +
Sbjct: 153 AICQEYREI 161


>AT1G14870.1 | Symbols: PCR2 | PLANT CADMIUM RESISTANCE 2 |
           chr1:5128591-5129458 REVERSE LENGTH=152
          Length = 152

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 56/126 (44%), Gaps = 27/126 (21%)

Query: 75  WEGELLDCFDDRRIALESACCPCYRFGK--NMKRAGFGSCFIQAVVYFLLANGAVLNFIA 132
           W     DCF D +    +  CPC  FG+   +   G  SC     +Y L+A         
Sbjct: 16  WSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIA--------- 66

Query: 133 FTVTRRHYSPYLGIAFIITVGAYLGFYRTRVRKKFNIKGSDSSLDDCVYHFICPCCTLCQ 192
             VT        G A I     Y  FYR ++R ++NIKG D +  DC+ HF C  C+L Q
Sbjct: 67  -VVT--------GCACI-----YSCFYRGKMRAQYNIKGDDCT--DCLKHFCCELCSLTQ 110

Query: 193 ESRTLE 198
           + R L+
Sbjct: 111 QYRELK 116


>AT3G18450.1 | Symbols:  | PLAC8 family protein |
           chr3:6331229-6332118 REVERSE LENGTH=184
          Length = 184

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 36/161 (22%)

Query: 75  WEGELLDCFDDRRIALESACCPCYRFGK--NMKRAGFGSCFIQAVVYFLLANGAVLNFIA 132
           W  +L DC +D   A+ +   PC  FG+   +   G   C    ++Y     GA+     
Sbjct: 52  WSSQLFDCMNDSENAVITLIAPCVTFGQIAEIVDEGATPCATAGLLY-----GALF---- 102

Query: 133 FTVTRRHYSPYLGIAFIITVGAYLGFYRTRVRKKFNIKGSDSSLDDCVYHFICPCCTLCQ 192
                     + G +F+     Y   +R R+RKKF +   D+   D + H +C    LCQ
Sbjct: 103 ----------FTGASFV-----YSYMFRARIRKKFGLP--DAPAPDWITHLVCMPFALCQ 145

Query: 193 ESRTLEMNNVQDGTWHGRGDTICIGGYRDGSKALTELSPPS 233
           E R L+         HG    +   G    ++    ++PP+
Sbjct: 146 EYRELKH--------HGFDPILGWAGNVQQAQQQEMMTPPT 178


>AT1G14880.1 | Symbols: PCR1 | PLANT CADMIUM RESISTANCE 1 |
           chr1:5132791-5133663 REVERSE LENGTH=151
          Length = 151

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 51/127 (40%), Gaps = 29/127 (22%)

Query: 75  WEGELLDCFDDRRIALESACCPCYRFGK--NMKRAGFGSCFIQAVVYFLLANGAVLNFIA 132
           W     DCF D R    + CCPC  FG+   +   G  SC     +Y L           
Sbjct: 15  WSTGFCDCFSDCRNCCITLCCPCITFGQVAEIVDRGSKSCCAAGALYML----------- 63

Query: 133 FTVTRRHYSPYLGIAFIITVG-AYLGFYRTRVRKKFNIKGSDSSLDDCVYHFICPCCTLC 191
                        I  I + G  Y  FY  ++R ++NIKG   +  DC+ HF C  C L 
Sbjct: 64  -------------IDLITSCGRMYACFYSGKMRAQYNIKGDGCT--DCLKHFCCNLCALT 108

Query: 192 QESRTLE 198
           Q+ R L+
Sbjct: 109 QQYRELK 115