Miyakogusa Predicted Gene
- Lj6g3v2116870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2116870.1 tr|A9RNP3|A9RNP3_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,27.27,0.0000000000008,seg,NULL; A_thal_Cys_rich:
uncharacterized Cys-rich domain,Uncharacterised protein family
Cys-rich; ,CUFF.60673.1
(768 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS323606 similar to UniRef100_Q2HTU7 Cluster: Uncharact... 1066 0.0
gnl|LJGI|TC65409 similar to UniRef100_A7R078 Cluster: Chromosome... 507 e-143
gnl|LJGI|AW163889 similar to UniRef100_A7R078 Cluster: Chromosom... 76 4e-13
>gnl|LJGI|FS323606 similar to UniRef100_Q2HTU7 Cluster: Uncharacterized Cys-rich
domain; n=1; Medicago truncatula|Rep: Uncharacterized
Cys-rich domain - Medicago truncatula (Barrel medic),
partial (80%)
Length = 824
Score = 1066 bits (538), Expect = 0.0
Identities = 570/578 (98%), Gaps = 2/578 (0%)
Strand = Plus / Plus
Query: 106 tttgacatgctttgttcctctgtcgcgatgcaaactgccaatgggacttgggggaagctt 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tttgacatgctttgttcctctgtcgcgatgcaaactgccaatgggacttgggggaagctt 306
Query: 166 ggaggaacttttagggatgaggaacaacaccttggtgttgctggggttttcaggatgtgg 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggaggaacttttagggatgaggaacaacaccttggtgttgctggggttttcaggatgtgg 366
Query: 226 gagggtgaattacttgattgtttcgatgatcgccgcatcgctcttgaatctgcatgttgt 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gagggtgaattacttgattgtttcgatgatcgccgcatcgctcttgaatctgcatgttgt 426
Query: 286 ccatgctaccggtttgggaagaacatgaagcgagctggttttggttcttgctttattcag 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ccatgctaccggtttgggaagaacatgaagcgagctggttttggttcttgctttattcag 486
Query: 346 gcagtagtatattttcttcttgcgaatggtgccgttcttaactttattgcctttacggtc 405
||||||||||||||||||||||| | ||||||| |||||||||||||||| |||||||||
Sbjct: 487 gcagtagtatattttcttcttgctattggtgcctttcttaactttattgcttttacggtc 546
Query: 406 acgaggcgtcactactccccataccttggaattgccttcatcattactgtgggagcatat 465
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 acgaggcgtcactacttcctataccttggaattgccttcatcattactgtgggagcatat 606
Query: 466 ttaggtttctatcgaactcgtgtgcgaaagaaattcaacatcaagggtagtgatagttcg 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ttaggtttctatcgaactcgtgtgcgaaagaaattcaacatcaagggtagtgatagttcg 666
Query: 526 ttggacgattgcgtttaccatttcatctgtccttgttgtacattatgtcaggagtcaaga 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ttggacgattgcgtttaccatttcatctgtccttgttgtacattatgtcaggagtcaaga 726
Query: 586 acacttgagatgaacaacgttcaagacggcacctggcatggtcggggtgacacgatatgt 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 acacttgagatgaacaacgttcaagacggcacctggcatggtcggggtgacacgatatgt 786
Query: 646 ataggtggctatagggat-gggagt-aaagcactcact 681
|||||||||||||||||| |||||| ||||||||||||
Sbjct: 787 ataggtggctatagggatggggagtaaaagcactcact 824
>gnl|LJGI|TC65409 similar to UniRef100_A7R078 Cluster: Chromosome undetermined
scaffold_298, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_298,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (25%)
Length = 671
Score = 507 bits (256), Expect = e-143
Identities = 259/260 (99%)
Strand = Plus / Plus
Query: 509 agggtagtgatagttcgttggacgattgcgtttaccatttcatctgtccttgttgtacat 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 agggtagtgatagttcgttggacgattgcgtttaccatttcatctgtccttgttgtacat 113
Query: 569 tatgtcaggagtcaagaacacttgagatgaacaacgttcaagacggcacctggcatggtc 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tatgtcaggagtcaagaacacttgagatgaacaacgttcaagacggcacctggcatggtc 173
Query: 629 ggggtgacacgatatgtataggtggctatagggatgggagtaaagcactcactgagttaa 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ggggtgacacgatatgtataggtggctatagggatgggagtaaagcactcactgagttaa 233
Query: 689 gccctccttctattgagaccatcaagcattctgatcaaaattgcacggaaaagagcatag 748
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gtcctccttctattgagaccatcaagcattctgatcaaaattgcacggaaaagagcatag 293
Query: 749 acatcagcagtgaatcttga 768
||||||||||||||||||||
Sbjct: 294 acatcagcagtgaatcttga 313
>gnl|LJGI|AW163889 similar to UniRef100_A7R078 Cluster: Chromosome undetermined
scaffold_298, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_298,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (23%)
Length = 265
Score = 75.8 bits (38), Expect = 4e-13
Identities = 89/106 (83%)
Strand = Plus / Plus
Query: 220 atgtgggagggtgaattacttgattgtttcgatgatcgccgcatcgctcttgaatctgca 279
|||||||||||||| | ||||||| || ||| |||| ||||| ||||||||||| |
Sbjct: 160 atgtgggagggtgatctctttgattgctttgatcatcgtcgcatagctcttgaatccata 219
Query: 280 tgttgtccatgctaccggtttgggaagaacatgaagcgagctggtt 325
| ||||| |||||||| |||||||||||||||||| |||||||||
Sbjct: 220 ttctgtccttgctaccgatttgggaagaacatgaagagagctggtt 265