Miyakogusa Predicted Gene

Lj6g3v2043280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2043280.1 Non Chatacterized Hit- tr|D7SIK8|D7SIK8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,48.86,8e-17,CCCH zinc finger,NULL; zf-CCCH,Zinc finger, CCCH-type;
zinc finger,Zinc finger, CCCH-type; seg,NULL;,CUFF.60638.1
         (586 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g08320.1                                                       444   e-124
Glyma13g31050.2                                                       377   e-104
Glyma13g31050.1                                                       377   e-104
Glyma04g32250.1                                                        83   1e-15
Glyma06g22290.1                                                        82   2e-15
Glyma06g15720.1                                                        78   3e-14
Glyma04g39220.1                                                        76   1e-13
Glyma05g32400.1                                                        63   7e-10

>Glyma15g08320.1 
          Length = 464

 Score =  444 bits (1141), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/457 (55%), Positives = 304/457 (66%), Gaps = 71/457 (15%)

Query: 173 TISLSPRAEIKDGNKR---ICDFFAKGWCIRGSSCTFLHIKEVVNNTDREAEVDFVDAHQ 229
           T +LSP AEIKDGNKR   ICDFFAKGWCIRGSSC+FLHIK+  +NTD+EAE D V  +Q
Sbjct: 34  TRNLSPSAEIKDGNKRPRIICDFFAKGWCIRGSSCSFLHIKDTGDNTDQEAEADSVSTYQ 93

Query: 230 MKGLSLEEGVKDNVHTSRMNEEEASLSWHRSHENQKFLPRDNLFPENRFAFNASNKYISP 289
            + L +EEGV++NV  SRMNE+EA+ SWH S E QKF PRDNLFP+NRF F+AS+ Y+SP
Sbjct: 94  KRQLKVEEGVRENVERSRMNEQEATPSWHPSQEKQKFPPRDNLFPDNRFPFSASDNYLSP 153

Query: 290 NLSSYSSRAE----------------------PFXXXXXXXXXXXXXXXXXXXYDWEPSV 327
           NLS  S+ A+                      P                         S+
Sbjct: 154 NLSLNSTCADGMATPRNQHMYKGYTSTLLSHSPNSSLVTQFAASSMSLSHRILAQSGRSL 213

Query: 328 PFQPSFFITSMNA--------------SIPRDLYGPVRDRIEILNIGDGSLKATILTEGP 373
           PF  S   +++++              S   DLY P+RD IEI NIGDGSLKA++L  G 
Sbjct: 214 PFSSSLGASNVDSLKFLNTDKEYLTSKSTFSDLYDPLRDSIEIPNIGDGSLKASLLIHGS 273

Query: 374 ---ASSQVRTY--AAVVGKHMSDLNEDKSSVSSHNRFYENEPNKSCVPREKDCLATETEI 428
               SSQVRTY  +AVVG+HMS+LN+DKSSVSSHN+F ENEPNK+C+P EKDCL  ETEI
Sbjct: 274 NVQVSSQVRTYGDSAVVGEHMSNLNDDKSSVSSHNKFCENEPNKNCLPHEKDCLPPETEI 333

Query: 429 TSGTYENYQNGKIGMGQHTFGVKDVMKPEKGRAEIDTRHHGEGSSHKKRRVEMDKKIHEM 488
           TSGTY+    GK+GMGQHTFG                      S HKK+RV+ DKK HEM
Sbjct: 334 TSGTYQ----GKMGMGQHTFG----------------------SGHKKKRVDRDKKNHEM 367

Query: 489 DVDFQANGSMQKETRELRNFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVIST 548
           DVDFQ +GS+QKE++ L+ FRAALVD VKELLKP+WHEG LSKD+H +IVKKSVDKV+ST
Sbjct: 368 DVDFQIDGSIQKESKALKFFRAALVDHVKELLKPAWHEGHLSKDAHIMIVKKSVDKVVST 427

Query: 549 LEPHQIPTSVDTAKHYVTSCRGKIAKLVTGYVTKYGK 585
           LEPHQIP  +DTAK YV+S + KIAKLV GYV KYGK
Sbjct: 428 LEPHQIPI-MDTAKQYVSSSQVKIAKLVNGYVNKYGK 463


>Glyma13g31050.2 
          Length = 431

 Score =  377 bits (969), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/271 (72%), Positives = 225/271 (83%), Gaps = 7/271 (2%)

Query: 321 YDWEPSVPFQPSFFITSMNASIPRDLYGPVRDRIEILNIGDGSLKATILTEGP---ASSQ 377
           YDWEPSVPF+PSFFITSMN S P DLY P+RD IEI NIGDGSLKA++L  G    ASSQ
Sbjct: 163 YDWEPSVPFRPSFFITSMNVSSPGDLYDPLRDSIEIPNIGDGSLKASLLIHGSNIQASSQ 222

Query: 378 VRTY--AAVVGKHMSDLNEDKSSVSSHNRFYENEPNKSCVPREKDCLATETEITSGTYEN 435
           VRTY  +AVVGKHM++LN+DKSSVSSHN+F ENEPNK+C+PREKDCL  ETEITSGTY +
Sbjct: 223 VRTYGDSAVVGKHMANLNDDKSSVSSHNKFCENEPNKNCLPREKDCLPPETEITSGTYVH 282

Query: 436 YQNGKIGMGQHTFGVKDVMKPEKGRAEIDTRHHGEGSSHKKRRVEMDKKIHEMDVDFQAN 495
           YQ GK+GMGQHTF V D  K E+   E D R HGEGS  KK+RV+ DKK HEMDVDFQ +
Sbjct: 283 YQ-GKMGMGQHTFEVADNKKKERDLTECDARCHGEGSGRKKKRVDRDKKNHEMDVDFQMD 341

Query: 496 GSMQKETRELRNFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIP 555
           GSMQKE++ L+ FRA L+D VKELLKP+WHEGRLSKD+H +IVKKSVDKV++TLEPHQIP
Sbjct: 342 GSMQKESKALKFFRAVLIDHVKELLKPAWHEGRLSKDTHIMIVKKSVDKVVNTLEPHQIP 401

Query: 556 TSVDTAKHYVTSCRGKIAKLVTGYVTKYGKS 586
           T +DTAK YV+S + KIAKLV GYV KYGKS
Sbjct: 402 T-IDTAKQYVSSSQVKIAKLVNGYVNKYGKS 431



 Score = 66.2 bits (160), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 39/54 (72%)

Query: 246 SRMNEEEASLSWHRSHENQKFLPRDNLFPENRFAFNASNKYISPNLSSYSSRAE 299
           S  N++EA+ SWH S E QKF  RDNL PENRF F+AS+ Y S NLS  S+RA+
Sbjct: 2   SMQNQQEATPSWHPSQEKQKFPLRDNLVPENRFPFSASDNYFSSNLSLTSTRAD 55


>Glyma13g31050.1 
          Length = 431

 Score =  377 bits (969), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/271 (72%), Positives = 225/271 (83%), Gaps = 7/271 (2%)

Query: 321 YDWEPSVPFQPSFFITSMNASIPRDLYGPVRDRIEILNIGDGSLKATILTEGP---ASSQ 377
           YDWEPSVPF+PSFFITSMN S P DLY P+RD IEI NIGDGSLKA++L  G    ASSQ
Sbjct: 163 YDWEPSVPFRPSFFITSMNVSSPGDLYDPLRDSIEIPNIGDGSLKASLLIHGSNIQASSQ 222

Query: 378 VRTY--AAVVGKHMSDLNEDKSSVSSHNRFYENEPNKSCVPREKDCLATETEITSGTYEN 435
           VRTY  +AVVGKHM++LN+DKSSVSSHN+F ENEPNK+C+PREKDCL  ETEITSGTY +
Sbjct: 223 VRTYGDSAVVGKHMANLNDDKSSVSSHNKFCENEPNKNCLPREKDCLPPETEITSGTYVH 282

Query: 436 YQNGKIGMGQHTFGVKDVMKPEKGRAEIDTRHHGEGSSHKKRRVEMDKKIHEMDVDFQAN 495
           YQ GK+GMGQHTF V D  K E+   E D R HGEGS  KK+RV+ DKK HEMDVDFQ +
Sbjct: 283 YQ-GKMGMGQHTFEVADNKKKERDLTECDARCHGEGSGRKKKRVDRDKKNHEMDVDFQMD 341

Query: 496 GSMQKETRELRNFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIP 555
           GSMQKE++ L+ FRA L+D VKELLKP+WHEGRLSKD+H +IVKKSVDKV++TLEPHQIP
Sbjct: 342 GSMQKESKALKFFRAVLIDHVKELLKPAWHEGRLSKDTHIMIVKKSVDKVVNTLEPHQIP 401

Query: 556 TSVDTAKHYVTSCRGKIAKLVTGYVTKYGKS 586
           T +DTAK YV+S + KIAKLV GYV KYGKS
Sbjct: 402 T-IDTAKQYVSSSQVKIAKLVNGYVNKYGKS 431



 Score = 66.2 bits (160), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 39/54 (72%)

Query: 246 SRMNEEEASLSWHRSHENQKFLPRDNLFPENRFAFNASNKYISPNLSSYSSRAE 299
           S  N++EA+ SWH S E QKF  RDNL PENRF F+AS+ Y S NLS  S+RA+
Sbjct: 2   SMQNQQEATPSWHPSQEKQKFPLRDNLVPENRFPFSASDNYFSSNLSLTSTRAD 55


>Glyma04g32250.1 
          Length = 744

 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 57/86 (66%)

Query: 500 KETRELRNFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVD 559
           K++R ++ F+ ++ + VKE+LKPSW +G +SK +   IVKK+VDKV   ++ H++P S  
Sbjct: 658 KDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQT 717

Query: 560 TAKHYVTSCRGKIAKLVTGYVTKYGK 585
               Y+ S + K+ KLV GYV KY K
Sbjct: 718 KISQYIDSSQRKLTKLVMGYVDKYVK 743


>Glyma06g22290.1 
          Length = 512

 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 57/86 (66%)

Query: 500 KETRELRNFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVD 559
           K++R ++ F+ ++ + VKE+LKPSW +G +SK +   IVKK+VDKV   ++ H++P S  
Sbjct: 426 KDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQV 485

Query: 560 TAKHYVTSCRGKIAKLVTGYVTKYGK 585
               Y+ S + K+ KLV GYV KY K
Sbjct: 486 KISQYIDSSQRKLTKLVMGYVDKYVK 511


>Glyma06g15720.1 
          Length = 828

 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 54/81 (66%)

Query: 506 RNFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVDTAKHYV 565
           R F+ ALV+ VKELLKP+W +G+++KD +  IVKK VDKV  +++   IP + +   HY+
Sbjct: 748 RAFKFALVEFVKELLKPTWKDGQITKDDYKTIVKKVVDKVTGSMQGANIPQTQEKIDHYL 807

Query: 566 TSCRGKIAKLVTGYVTKYGKS 586
           +  + K+ KLV  YV K  K+
Sbjct: 808 SFSKPKLNKLVQAYVEKVQKA 828


>Glyma04g39220.1 
          Length = 416

 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 54/81 (66%)

Query: 506 RNFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVDTAKHYV 565
           R F+ ALV+ VKELLKP+W +G+++K+ +  IVKK VDKV  +++   IP + +   HY+
Sbjct: 336 RAFKFALVEFVKELLKPTWKDGQITKEDYKTIVKKVVDKVTGSMQGVNIPQTQEKIDHYL 395

Query: 566 TSCRGKIAKLVTGYVTKYGKS 586
           +  + K+ KLV  YV K  K+
Sbjct: 396 SFSKPKLNKLVQAYVEKVQKA 416


>Glyma05g32400.1 
          Length = 74

 Score = 63.2 bits (152), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/72 (40%), Positives = 48/72 (66%)

Query: 505 LRNFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVDTAKHY 564
           +  F+ +LV+ VKELL P+W +G+++K+ +  IVKK  DKVI T++   IP + +    Y
Sbjct: 2   IHTFKFSLVEFVKELLNPTWKDGKITKEDYKAIVKKVTDKVIDTVQGAHIPQTQEKIDCY 61

Query: 565 VTSCRGKIAKLV 576
           ++S + K+ KLV
Sbjct: 62  LSSSKSKLNKLV 73