Miyakogusa Predicted Gene

Lj6g3v2043280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2043280.1 Non Chatacterized Hit- tr|D7SIK8|D7SIK8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,48.86,8e-17,CCCH zinc finger,NULL; zf-CCCH,Zinc finger, CCCH-type;
zinc finger,Zinc finger, CCCH-type; seg,NULL;,CUFF.60638.1
         (586 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33835.1 | Symbols: FES1 | Zinc finger C-x8-C-x5-C-x3-H type ...   124   1e-28
AT3G18640.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type fami...    83   6e-16
AT3G26850.2 | Symbols:  | histone-lysine N-methyltransferases | ...    80   5e-15
AT3G26850.1 | Symbols:  | histone-lysine N-methyltransferases | ...    80   5e-15

>AT2G33835.1 | Symbols: FES1 | Zinc finger C-x8-C-x5-C-x3-H type
           family protein | chr2:14312145-14314566 REVERSE
           LENGTH=587
          Length = 587

 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/281 (34%), Positives = 139/281 (49%), Gaps = 44/281 (15%)

Query: 322 DWEPSVPFQPSFFITSMNASIPRDLYGPVRDRIEILNIGDGSLKATILTEG----PASSQ 377
           DWEPS PF+ SF I          LY P  D   I N+GD  L  ++ ++G     +S Q
Sbjct: 333 DWEPSEPFKASFTIPPYILPSSDALYDPFTD---IENLGDRPLNDSLSSKGEHARKSSCQ 389

Query: 378 VRTYAAVVGKHMSDL-NEDKSSVSSHNRFYEN-----------EPNKSCVPREKDCLATE 425
            +   +  G    D  N+DKSS  S N+  E            E   + V  + D     
Sbjct: 390 QKDGDSASGPQARDCKNDDKSSSCSQNQHQETVARSLEAHGVVEGVATSVVDQNDTATPS 449

Query: 426 TEITSGTYENYQNGKIGMGQHTFGVKDVMKPEKGRAEIDTRHHGEGSSHKKRRVEMDKKI 485
            EI+S T    +            V   +KP    A  D+ H  +GSS+KK      KK 
Sbjct: 450 KEISSATAAENRV-----------VLKRIKP----AGHDSWHRSDGSSYKK-----TKKS 489

Query: 486 HEMDVDFQANGSMQKETRELRNFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKV 545
            E+D + +++  M    + +R FR A+V+ +KE+LKP W EGRL+KD HN+IVKK+ +KV
Sbjct: 490 DEIDGEVRSDAGM----KVMRLFRTAVVETIKEMLKPLWREGRLTKDVHNMIVKKAAEKV 545

Query: 546 I-STLEPHQIPTSVDTAKHYVTSCRGKIAKLVTGYVTKYGK 585
           + + ++ HQ+PT  ++   Y+     +I KLV GYV KYGK
Sbjct: 546 VGAAVQFHQVPTDTESVDQYLGLSGTRIVKLVEGYVEKYGK 586


>AT3G18640.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type family
           protein | chr3:6413617-6415829 REVERSE LENGTH=676
          Length = 676

 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 60/88 (68%)

Query: 499 QKETRELRNFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSV 558
           +K+ + +R F+ ALV++VKELLKP+W EG+L+KD +  IVKK  +KV  T++   +P + 
Sbjct: 589 EKDPKGMRAFKFALVEVVKELLKPAWKEGKLNKDGYKNIVKKVAEKVTGTMQSGNVPQTQ 648

Query: 559 DTAKHYVTSCRGKIAKLVTGYVTKYGKS 586
           +   HY+++ + K+ KLV  YV K  K+
Sbjct: 649 EKIDHYLSASKPKLTKLVQAYVGKIKKT 676


>AT3G26850.2 | Symbols:  | histone-lysine N-methyltransferases |
           chr3:9896541-9897415 REVERSE LENGTH=265
          Length = 265

 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 17/203 (8%)

Query: 396 KSSVSSHNRFYENEPNKSCVPREKDC---LATETEITSGTYENYQNGKIGM--GQHTFGV 450
           K+S+SS NR    E N   V +E  C   +     ++S    + +    G+  G+   G 
Sbjct: 68  KASISS-NRPLSMEENNQAVDKEPLCESEMTARVSVSSNKPADVEENTAGIEIGEVVSGE 126

Query: 451 KDVMKPEKGRAEIDTR----HHGEGSSHKKRRVEMDKKIHEMDVDFQANGSMQKE---TR 503
            D    E G+   D R    H     +      +++  +HE D   + +    KE   +R
Sbjct: 127 DD----EFGKNVDDGRECNSHETLTPNSDNENPKVENNVHEGDNTRKKSREKSKERDSSR 182

Query: 504 ELRNFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVDTAKH 563
            ++ F+  L   VK+LLKPSW +G +SK++   IVK+ VDKV +++E  +IP S      
Sbjct: 183 SMKLFKVVLTKFVKDLLKPSWRQGNMSKEAFKTIVKRVVDKVSNSMEGRRIPKSRAKIDK 242

Query: 564 YVTSCRGKIAKLVTGYVTKYGKS 586
           Y+ S + K+ KLV GYV KY K+
Sbjct: 243 YIDSSQQKLTKLVMGYVDKYVKA 265


>AT3G26850.1 | Symbols:  | histone-lysine N-methyltransferases |
           chr3:9896541-9897415 REVERSE LENGTH=265
          Length = 265

 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 17/203 (8%)

Query: 396 KSSVSSHNRFYENEPNKSCVPREKDC---LATETEITSGTYENYQNGKIGM--GQHTFGV 450
           K+S+SS NR    E N   V +E  C   +     ++S    + +    G+  G+   G 
Sbjct: 68  KASISS-NRPLSMEENNQAVDKEPLCESEMTARVSVSSNKPADVEENTAGIEIGEVVSGE 126

Query: 451 KDVMKPEKGRAEIDTR----HHGEGSSHKKRRVEMDKKIHEMDVDFQANGSMQKE---TR 503
            D    E G+   D R    H     +      +++  +HE D   + +    KE   +R
Sbjct: 127 DD----EFGKNVDDGRECNSHETLTPNSDNENPKVENNVHEGDNTRKKSREKSKERDSSR 182

Query: 504 ELRNFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVDTAKH 563
            ++ F+  L   VK+LLKPSW +G +SK++   IVK+ VDKV +++E  +IP S      
Sbjct: 183 SMKLFKVVLTKFVKDLLKPSWRQGNMSKEAFKTIVKRVVDKVSNSMEGRRIPKSRAKIDK 242

Query: 564 YVTSCRGKIAKLVTGYVTKYGKS 586
           Y+ S + K+ KLV GYV KY K+
Sbjct: 243 YIDSSQQKLTKLVMGYVDKYVKA 265