Miyakogusa Predicted Gene

Lj6g3v2006300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2006300.1 tr|Q0DBU7|Q0DBU7_ORYSJ Os06g0525000 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os06g05250,74.07,4e-19,seg,NULL,CUFF.60454.1
         (119 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g21840.1                                                       113   4e-26

>Glyma13g21840.1 
          Length = 108

 Score =  113 bits (283), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/121 (54%), Positives = 72/121 (59%), Gaps = 17/121 (14%)

Query: 1   MTENNPKT---KTHDLPLPEXXXXXXXXXXXNGDHGSTKL-TPPKRHFNPPESEIPDAAT 56
           MTENNPKT    +  +P P              D G  KL    K HFNPPE EIPDAAT
Sbjct: 1   MTENNPKTHYPSSGGIPSPS-------------DDGPKKLPGKQKMHFNPPEKEIPDAAT 47

Query: 57  LKDQWRYAIRQYSKWYSHAWGTAIXXXXXXXXXXWLIKGENPIPSFRSNNAQSHDDGDGK 116
           L+DQWRYAIRQYSKWYSHAWGTAI          W IKGENPIPSF SN  +  D+ +  
Sbjct: 48  LRDQWRYAIRQYSKWYSHAWGTAILAGTAFFALGWFIKGENPIPSFNSNKDKDKDNHNSH 107

Query: 117 P 117
           P
Sbjct: 108 P 108