Miyakogusa Predicted Gene

Lj6g3v2006300.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2006300.1 tr|Q0DBU7|Q0DBU7_ORYSJ Os06g0525000 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os06g05250,74.07,4e-19,seg,NULL,CUFF.60454.1
         (361 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66341 similar to UniRef100_Q0DBV0 Cluster: Os06g05245...   555   e-158

>gnl|LJGI|TC66341 similar to UniRef100_Q0DBV0 Cluster: Os06g0524500 protein; n=1;
           Oryza sativa Japonica Group|Rep: Os06g0524500 protein -
           Oryza sativa subsp. japonica (Rice), partial (45%)
          Length = 654

 Score =  555 bits (280), Expect = e-158
 Identities = 335/361 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgactgagaataacccaaaaaccaaaacccatgatcttcctcttccagaaccaccacca 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 41  atgactgagaataacccaaaaaccaaaacccatgatcttcctcttccagaaccaccgcca 100

                                                                       
Query: 61  nnnnnnnnnnnnnnnnnnnnnnnaaacggggatcatggatcaaccaaattgacacccccc 120
                                  ||||| |||||||||||||||||||||||||||||||
Sbjct: 101 tcttcttcttcttcttcttcttcaaacgaggatcatggatcaaccaaattgacacccccc 160

                                                                       
Query: 121 aagaggcatttcaacccaccagaatcagagattccagatgctgcaactctgaaggatcaa 180
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aagaggcatttcaacctaccagaatcagagattccagatgctgcaactctgaaggatcaa 220

                                                                       
Query: 181 tggaggtacgccatcaggcaatacagcaaatggtactctcacgcttggggcactgcaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tggaggtacgccatcaggcaatacagcaaatggtactctcacgcttggggcactgcaatt 280

                                                                       
Query: 241 ctcgctgggggtgccttcttcgcccttggttggctcatcaagggtgaaaaccctataccc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ctcgctgggggtgccttcttcgcccttggttggctcatcaagggtgaaaaccctataccc 340

                                                                       
Query: 301 tcttttcgctccaacaacgctcaatctcatgacgacggtgacggcaaacctccctcttga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tcttttcgctccaacaacgctcaatctcatgacgacggtgacggcaaacctccctcttga 400

            
Query: 361 t 361
           |
Sbjct: 401 t 401