Miyakogusa Predicted Gene
- Lj6g3v1954020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1954020.1 Non Chatacterized Hit- tr|Q5N168|Q5N168_SYNP6
Putative uncharacterized protein OS=Synechococcus sp.
,33.65,5e-19,seg,NULL; CbiQ,ABC/ECF transporter, transmembrane
component,CUFF.60324.1
(765 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58001 similar to UniRef100_Q944H2 Cluster: AT3g21580/... 1495 0.0
gnl|LJGI|TC75299 similar to UniRef100_Q3EB30 Cluster: Uncharacte... 747 0.0
>gnl|LJGI|TC58001 similar to UniRef100_Q944H2 Cluster: AT3g21580/MIL23_14; n=1;
Arabidopsis thaliana|Rep: AT3g21580/MIL23_14 -
Arabidopsis thaliana (Mouse-ear cress), partial (76%)
Length = 1233
Score = 1495 bits (754), Expect = 0.0
Identities = 764/766 (99%), Gaps = 1/766 (0%)
Strand = Plus / Plus
Query: 1 atgcgatttggattagttatatacttgactttgctttcaatttgggttctaccaagaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 atgcgatttggattagttatatacttgactttgctttcaatttgggttctaccaagaagt 518
Query: 61 acttggacggatcaactaggacgagtttatttgctatcaggattgctattcataacctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 acttggacggatcaactaggacgagtttatttgctatcaggattgctattcataacctca 578
Query: 121 gggctaggtgcagatggtgcacctgcacttgttcagttgagaactccaccacctgcagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gggctaggtgcagatggtgcacctgcacttgttcagttgagaactccaccacctgcagtg 638
Query: 181 acggggcttcctaatcttcctgtatcattaacaggttattcatatttaatctcgaagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 acggggcttcctaatcttcctgtatcattaacaggttattcatatttaatctcgaagtta 698
Query: 241 ggtccattaacctttacaaggaaaggtttatctgtagcaagtactgttgcatgtttgact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ggtccattaacctttacaaggaaaggtttatctgtagcaagtactgttgcatgtttgact 758
Query: 301 tttacagtatttcaaagtgctagtctctgccttacaactactacccctgaacaactagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tttacagtatttcaaagtgctagtctctgccttacaactactacccctgaacaactagcc 818
Query: 361 ttt-gcattacgatggtttatgctccctctgagatatctgggtgtctctgtgtcagaaat 419
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 819 ttttgcattacgatggtttatgctccctctgaaatatctgggtgtctctgtgtcagaaat 878
Query: 420 tgtgctttcccttttactttcgttgaggttcatcagtctagtttttgacgaggtgcgtaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 tgtgctttcccttttactttcgttgaggttcatcagtctagtttttgacgaggtgcgtaa 938
Query: 480 ccttgctatgggaatcgtatctcgcagggtaaattggaaacaattgactgttatggagac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 ccttgctatgggaatcgtatctcgcagggtaaattggaaacaattgactgttatggagac 998
Query: 540 aattgatattttcttcaactactttcggcgcatcttcaaaaatattttcagccatgcaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 aattgatattttcttcaactactttcggcgcatcttcaaaaatattttcagccatgcaga 1058
Query: 600 gcaaatttctcaggctatgatagtcagaggttttaaaggggacgttggctctcaaaaaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 gcaaatttctcaggctatgatagtcagaggttttaaaggggacgttggctctcaaaaaat 1118
Query: 660 ttatttcttgtcagaaccttcttttgggatggcagatattatatgcttattgtgcttgaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 ttatttcttgtcagaaccttcttttgggatggcagatattatatgcttattgtgcttgaa 1178
Query: 720 aattgtcataggagctgctctcttgtctgagtattactttgtctaa 765
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 aattgtcataggagctgctctcttgtctgagtattactttgtctaa 1224
>gnl|LJGI|TC75299 similar to UniRef100_Q3EB30 Cluster: Uncharacterized protein
At3g21580.1; n=2; Arabidopsis thaliana|Rep:
Uncharacterized protein At3g21580.1 - Arabidopsis
thaliana (Mouse-ear cress), partial (59%)
Length = 628
Score = 747 bits (377), Expect = 0.0
Identities = 377/377 (100%)
Strand = Plus / Plus
Query: 389 tgagatatctgggtgtctctgtgtcagaaattgtgctttcccttttactttcgttgaggt 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagatatctgggtgtctctgtgtcagaaattgtgctttcccttttactttcgttgaggt 60
Query: 449 tcatcagtctagtttttgacgaggtgcgtaaccttgctatgggaatcgtatctcgcaggg 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcatcagtctagtttttgacgaggtgcgtaaccttgctatgggaatcgtatctcgcaggg 120
Query: 509 taaattggaaacaattgactgttatggagacaattgatattttcttcaactactttcggc 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaattggaaacaattgactgttatggagacaattgatattttcttcaactactttcggc 180
Query: 569 gcatcttcaaaaatattttcagccatgcagagcaaatttctcaggctatgatagtcagag 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcatcttcaaaaatattttcagccatgcagagcaaatttctcaggctatgatagtcagag 240
Query: 629 gttttaaaggggacgttggctctcaaaaaatttatttcttgtcagaaccttcttttggga 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttttaaaggggacgttggctctcaaaaaatttatttcttgtcagaaccttcttttggga 300
Query: 689 tggcagatattatatgcttattgtgcttgaaaattgtcataggagctgctctcttgtctg 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggcagatattatatgcttattgtgcttgaaaattgtcataggagctgctctcttgtctg 360
Query: 749 agtattactttgtctaa 765
|||||||||||||||||
Sbjct: 361 agtattactttgtctaa 377