Miyakogusa Predicted Gene

Lj6g3v1946360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1946360.1 tr|G7LE60|G7LE60_MEDTR Protein TIFY 5A
OS=Medicago truncatula GN=MTR_8g107300 PE=4
SV=1,55.45,0.000000000000004,DUF761,Protein of unknown function
DUF761, plant; seg,NULL,CUFF.60250.1
         (260 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g019160.1 | transmembrane protein, putative | HC | chr2:61...   266   1e-71

>Medtr2g019160.1 | transmembrane protein, putative | HC |
           chr2:6185641-6184595 | 20130731
          Length = 266

 Score =  266 bits (680), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 161/266 (60%), Positives = 186/266 (69%), Gaps = 20/266 (7%)

Query: 1   MKEYKPKDHT-LNRAKNXXXXXXXXXXXXXXCVFYVFNLSPYTLLNNNIFWFFMSNTLIL 59
           +K+YK K+++  N+AKN              C+FY+FNLSPYTLLNNNIFWF MSNTLIL
Sbjct: 12  IKDYKLKNNSNPNKAKNLSFFASIFSLFIYICIFYIFNLSPYTLLNNNIFWFIMSNTLIL 71

Query: 60  IIVADYGAFSSSNKKKQDLYEEYVKHSSQARNHHVSQLVPEYDE-QVDKQCINPKKELHG 118
           II  DY AFSSS +K++DL+EEYVKHS + RNH  S  +P YDE QVDKQCI    +   
Sbjct: 72  IIAIDYEAFSSSKQKQEDLHEEYVKHSQEIRNHVSS--IPTYDELQVDKQCIINSNQ--- 126

Query: 119 EILQEKKETISDQIVPERVLEIVVQNQPKKPR---ERANEKKSPELHLQLDDDDYYKELH 175
           E LQE+KET    IVPERVLEIVVQNQPKK R   + ANEKK   L LQ+D DD +KE  
Sbjct: 127 EFLQEEKET----IVPERVLEIVVQNQPKKIRTSDDSANEKKKSTLLLQVDGDDVHKEHE 182

Query: 176 EEKAIVPAR-IYRRTKSDRHNRAKHEM--ERMNPVRRLESMXXXXXXXXXXXXXFSRMTN 232
            EKA  P R IYRR+KS RHNRAKH +  ER N VRRLESM             FS+M+N
Sbjct: 183 LEKATFPTRSIYRRSKSYRHNRAKHVVIDERRNSVRRLESM--KMEPKIEEENEFSKMSN 240

Query: 233 EDLNRRVEEFIQKFNRQIRLQA-TIN 257
           EDLN+RVEEFIQKFN+QIRLQA TIN
Sbjct: 241 EDLNKRVEEFIQKFNKQIRLQASTIN 266