Miyakogusa Predicted Gene
- Lj6g3v1946360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1946360.1 tr|G7LE60|G7LE60_MEDTR Protein TIFY 5A
OS=Medicago truncatula GN=MTR_8g107300 PE=4
SV=1,55.45,0.000000000000004,DUF761,Protein of unknown function
DUF761, plant; seg,NULL,CUFF.60250.1
(260 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G30190.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 92 3e-19
AT2G34610.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 83 2e-16
>AT1G30190.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G34610.1); Has 56 Blast hits to 56 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 44; Viruses - 0; Other Eukaryotes - 12
(source: NCBI BLink). | chr1:10618966-10619802 FORWARD
LENGTH=278
Length = 278
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 25/241 (10%)
Query: 32 VFYVFNLSPYTLLNNNIFWFFMSNTLILIIVADYGAFSSSNKKKQDLYEEYVKHSSQARN 91
+F+VF +S ++ + FF+SNTLILII ADYG+FS +K+ QD Y EY ++ RN
Sbjct: 39 IFHVFEVSLSSVFKDTKVLFFISNTLILIIAADYGSFS--DKESQDFYGEYTVAAATMRN 96
Query: 92 ---HHVSQLVPEYDEQV-DKQCINPKKELHGEILQEKKETISDQIV---PERVLEIVVQN 144
++ V Y E D + NPK +E + + D I PE+++ +V +
Sbjct: 97 RADNYSPIPVLTYRENTKDGEIKNPKDVEFRNPEEEDEPMVKDIICVSPPEKIVRVV--S 154
Query: 145 QPKKPRERANEKKSPELHLQLDDDDYYKELHEEKAIVPARIYRRTKSDRHNRAKHEMERM 204
+ K+ + A E+ P L ++ + + P + Y R+KSD+ R + ++
Sbjct: 155 EKKQRDDVAMEEYKPVTEQTLASEE---ACNTRNHVNPNKPYGRSKSDKPRRKRLSVDTE 211
Query: 205 NPVR-----------RLESMXXXXXXXXXXXXXFSRMTNEDLNRRVEEFIQKFNRQIRLQ 253
R R + FS+++NE+LN+RVEEFIQ+FNRQIR Q
Sbjct: 212 TTKRKSYGRKKSDCSRWMVIPEKWEYVKEESEEFSKLSNEELNKRVEEFIQRFNRQIRSQ 271
Query: 254 A 254
+
Sbjct: 272 S 272
>AT2G34610.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G30190.1); Has 342 Blast hits to 279 proteins
in 74 species: Archae - 0; Bacteria - 7; Metazoa - 76;
Fungi - 18; Plants - 51; Viruses - 0; Other Eukaryotes -
190 (source: NCBI BLink). | chr2:14575467-14576339
FORWARD LENGTH=290
Length = 290
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 50/260 (19%)
Query: 32 VFYVFNLSPYTLLNNNIFWFFMSNTLILIIVADYGAFSSSNKKKQDLYEEYVKHSSQARN 91
+F+V ++SP ++ N+ F +SN LI+II ADYGAF ++K+ D Y EY ++ R
Sbjct: 42 IFHVLDVSPLSIFNDTKILFVISNALIIIIAADYGAF--TDKENLDFYGEY---TAAMRR 96
Query: 92 HHVSQLVPE---YDEQVDKQCINPKKELHGEILQEKKETISDQIVP-------ERVLEIV 141
PE Y + ++ N +K+ G + + DQ +P ER+++ V
Sbjct: 97 DAQENPRPEKSVYGVSMAEETKNREKQ-EGPV---GARDLQDQYLPNKKAKVTERIIQAV 152
Query: 142 VQNQPKKPRERANEKKSPELHLQLDDDDYYKELHEEKAIVPARIYRRTKSDR-------- 193
+NQ PR +A EK P + +E ++ ++ Y R+KSD+
Sbjct: 153 SKNQ---PRNKAIEKCEPVTEQNVHIIAAKEETCNASNLMNSKAYGRSKSDKARGSVISK 209
Query: 194 -------------HNRAKHEMERMNPVRR-------LESMXXXXXXXXXXXXXFSRMTNE 233
++R++ + + V + +E FS+M+NE
Sbjct: 210 ERRRQEIKHRHKSYDRSQSDSSKWMVVHKGKKADEEMEEATKKWENVKEESEEFSKMSNE 269
Query: 234 DLNRRVEEFIQKFNRQIRLQ 253
+LNRRVE+FIQ+FNR I+ Q
Sbjct: 270 ELNRRVEDFIQRFNRDIKRQ 289