Miyakogusa Predicted Gene

Lj6g3v1932850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1932850.1 tr|I3SWB6|I3SWB6_LOTJA 60S ribosomal protein L18a
OS=Lotus japonicus PE=2 SV=1,100,0,60S RIBOSOMAL PROTEIN
L18A,Ribosomal protein L18a; Ribosomal_L18ae,Ribosomal protein
L18a/LX,NODE_25735_length_303_cov_988.501648.path2.1
         (92 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g10220.1                                                       192   7e-50
Glyma14g03380.1                                                       187   1e-48
Glyma02g45430.1                                                       187   3e-48
Glyma18g13270.1                                                       184   1e-47
Glyma08g42060.1                                                       149   8e-37
Glyma13g28830.1                                                       134   2e-32
Glyma14g03380.2                                                       133   4e-32
Glyma17g31430.1                                                       115   8e-27
Glyma17g16910.1                                                        91   3e-19
Glyma19g21610.1                                                        56   1e-08
Glyma08g36110.1                                                        51   3e-07

>Glyma15g10220.1 
          Length = 178

 Score =  192 bits (488), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 89/92 (96%), Positives = 92/92 (100%)

Query: 1  MVTFRFHQYQVVGRALPTDSDQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
          MVTFRFHQYQVVGRALPT++DQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1  MVTFRFHQYQVVGRALPTEADQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61 LAINEIFEKNPTKIKNFGIWLRYQSRTGYHNM 92
          LAINEIFEKNPTKIKN+GIWLRYQSRTGYHNM
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNM 92


>Glyma14g03380.1 
          Length = 178

 Score =  187 bits (476), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 87/92 (94%), Positives = 90/92 (97%)

Query: 1  MVTFRFHQYQVVGRALPTDSDQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
          MV  RFHQYQVVGRALPT+SD+HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1  MVAMRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61 LAINEIFEKNPTKIKNFGIWLRYQSRTGYHNM 92
          LAINEIFEKNPTKIKN+GIWLRYQSRTGYHNM
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNM 92


>Glyma02g45430.1 
          Length = 178

 Score =  187 bits (474), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 86/92 (93%), Positives = 90/92 (97%)

Query: 1  MVTFRFHQYQVVGRALPTDSDQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
          MV  RFHQYQVVGRALPT+SD+HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1  MVAMRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61 LAINEIFEKNPTKIKNFGIWLRYQSRTGYHNM 92
          LAINEIFE+NPTKIKN+GIWLRYQSRTGYHNM
Sbjct: 61 LAINEIFERNPTKIKNYGIWLRYQSRTGYHNM 92


>Glyma18g13270.1 
          Length = 178

 Score =  184 bits (468), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 85/92 (92%), Positives = 90/92 (97%)

Query: 1  MVTFRFHQYQVVGRALPTDSDQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
          MVTFR HQYQVVGRALPT++D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1  MVTFRVHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61 LAINEIFEKNPTKIKNFGIWLRYQSRTGYHNM 92
          LAINE+FEKNPTKIKN+GIWLRYQSRTGYHNM
Sbjct: 61 LAINEVFEKNPTKIKNYGIWLRYQSRTGYHNM 92


>Glyma08g42060.1 
          Length = 129

 Score =  149 bits (375), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 77/117 (65%), Positives = 82/117 (70%), Gaps = 30/117 (25%)

Query: 6   FHQYQVVGRALPTDSDQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINE 65
           FHQYQVVGRALPT++D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+LAINE
Sbjct: 1   FHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINE 60

Query: 66  ------------------------------IFEKNPTKIKNFGIWLRYQSRTGYHNM 92
                                            K+PTKIKN+GI LRYQSRTGYHNM
Sbjct: 61  PYFDMDRSTRRQIFSCVLLQHCRLQLQIVIFLRKSPTKIKNYGISLRYQSRTGYHNM 117


>Glyma13g28830.1 
          Length = 93

 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/72 (90%), Positives = 69/72 (95%), Gaps = 3/72 (4%)

Query: 1  MVTFRFHQYQVVGRALPTDSDQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
          MVTFRFHQYQVVGRALPT++DQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1  MVTFRFHQYQVVGRALPTEADQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61 LAINE---IFEK 69
          LAINE   +F+K
Sbjct: 61 LAINEFPLVFQK 72


>Glyma14g03380.2 
          Length = 150

 Score =  133 bits (335), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 63/64 (98%), Positives = 64/64 (100%)

Query: 29 MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNFGIWLRYQSRTG 88
          MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKN+GIWLRYQSRTG
Sbjct: 1  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTG 60

Query: 89 YHNM 92
          YHNM
Sbjct: 61 YHNM 64


>Glyma17g31430.1 
          Length = 151

 Score =  115 bits (289), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 57/61 (93%)

Query: 6  FHQYQVVGRALPTDSDQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINE 65
          FHQ QVVGRALPT++DQHPKIYRMKLWATNEV AKSKFWYFLRKLKKVKKSN QVLAI E
Sbjct: 1  FHQCQVVGRALPTEADQHPKIYRMKLWATNEVCAKSKFWYFLRKLKKVKKSNDQVLAIKE 60

Query: 66 I 66
          +
Sbjct: 61 V 61


>Glyma17g16910.1 
          Length = 64

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/61 (86%), Positives = 55/61 (90%)

Query: 5  RFHQYQVVGRALPTDSDQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAIN 64
           FHQYQVVGRALPT  DQHPKIY+MKLW+TNEV AKSKFWYFLRKLKKVKK N QVLAIN
Sbjct: 4  HFHQYQVVGRALPTQPDQHPKIYQMKLWSTNEVFAKSKFWYFLRKLKKVKKRNNQVLAIN 63

Query: 65 E 65
          E
Sbjct: 64 E 64


>Glyma19g21610.1 
          Length = 114

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/30 (80%), Positives = 27/30 (90%)

Query: 63 INEIFEKNPTKIKNFGIWLRYQSRTGYHNM 92
          I + FEKNPTKIKN+GIWLRYQSRTGY +M
Sbjct: 1  IFQTFEKNPTKIKNYGIWLRYQSRTGYDSM 30


>Glyma08g36110.1 
          Length = 26

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/26 (80%), Positives = 24/26 (92%)

Query: 11 VVGRALPTDSDQHPKIYRMKLWATNE 36
          VVGRALPT++DQHPKIYRM  WATN+
Sbjct: 1  VVGRALPTEADQHPKIYRMMFWATNK 26