Miyakogusa Predicted Gene
- Lj6g3v1932850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1932850.1 tr|I3SWB6|I3SWB6_LOTJA 60S ribosomal protein L18a
OS=Lotus japonicus PE=2 SV=1,100,0,60S RIBOSOMAL PROTEIN
L18A,Ribosomal protein L18a; Ribosomal_L18ae,Ribosomal protein
L18a/LX,NODE_25735_length_303_cov_988.501648.path2.1
(276 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57590 547 e-155
gnl|LJGI|TC57907 204 2e-52
gnl|LJGI|TC57896 204 2e-52
gnl|LJGI|TC63438 129 1e-29
>gnl|LJGI|TC57590
Length = 813
Score = 547 bits (276), Expect = e-155
Identities = 276/276 (100%)
Strand = Plus / Plus
Query: 1 atggttaccttcaggttccatcagtaccaggttgtcgggagggctctccccactgattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atggttaccttcaggttccatcagtaccaggttgtcgggagggctctccccactgattcc 122
Query: 61 gaccagcaccccaagatttaccgcatgaagctctgggccaccaatgaggttcgcgccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gaccagcaccccaagatttaccgcatgaagctctgggccaccaatgaggttcgcgccaag 182
Query: 121 tccaagttctggtatttcctgaggaaattgaagaaggttaagaagagcaatggtcaagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tccaagttctggtatttcctgaggaaattgaagaaggttaagaagagcaatggtcaagtc 242
Query: 181 cttgctatcaatgagatttttgagaagaacccaaccaagattaagaactttgggatatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cttgctatcaatgagatttttgagaagaacccaaccaagattaagaactttgggatatgg 302
Query: 241 ttgaggtatcagagtaggactggctaccacaacatg 276
||||||||||||||||||||||||||||||||||||
Sbjct: 303 ttgaggtatcagagtaggactggctaccacaacatg 338
>gnl|LJGI|TC57907
Length = 835
Score = 204 bits (103), Expect = 2e-52
Identities = 217/255 (85%)
Strand = Plus / Plus
Query: 1 atggttaccttcaggttccatcagtaccaggttgtcgggagggctctccccactgattcc 60
|||||| | |||| ||| || |||||||| ||||| || || |||||||| || || |||
Sbjct: 56 atggttgcattcaagtttcaccagtaccaagttgtgggaagagctctccctaccgaatcc 115
Query: 61 gaccagcaccccaagatttaccgcatgaagctctgggccaccaatgaggttcgcgccaag 120
|| | ||||||||||| ||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 116 gatgaccaccccaagatctaccggatgaagctttgggccaccaatgaggtccgtgccaaa 175
Query: 121 tccaagttctggtatttcctgaggaaattgaagaaggttaagaagagcaatggtcaagtc 180
|||||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 176 tccaagttctggtatttcctgaggaagttgaagaaggtgaagaagagtaatgggcaagtg 235
Query: 181 cttgctatcaatgagatttttgagaagaacccaaccaagattaagaactttgggatatgg 240
|| ||||||||||||||||||||||| || || |||| |||||||||| ||| || |||
Sbjct: 236 ctagctatcaatgagatttttgagaaaaatcctaccacaattaagaactatggaatttgg 295
Query: 241 ttgaggtatcagagt 255
|| | |||||||||
Sbjct: 296 ctgcgttatcagagt 310
>gnl|LJGI|TC57896
Length = 791
Score = 204 bits (103), Expect = 2e-52
Identities = 217/255 (85%)
Strand = Plus / Plus
Query: 1 atggttaccttcaggttccatcagtaccaggttgtcgggagggctctccccactgattcc 60
|||||| | |||| ||| || |||||||| ||||| || || |||||||| || || |||
Sbjct: 54 atggttgcattcaagtttcaccagtaccaagttgtgggaagagctctccctaccgaatcc 113
Query: 61 gaccagcaccccaagatttaccgcatgaagctctgggccaccaatgaggttcgcgccaag 120
|| | ||||||||||| ||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 114 gatgaccaccccaagatctaccggatgaagctttgggccaccaatgaggtccgtgccaaa 173
Query: 121 tccaagttctggtatttcctgaggaaattgaagaaggttaagaagagcaatggtcaagtc 180
|||||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 174 tccaagttctggtatttcctgaggaagttgaagaaggtgaagaagagtaatgggcaagtg 233
Query: 181 cttgctatcaatgagatttttgagaagaacccaaccaagattaagaactttgggatatgg 240
|| ||||||||||||||||||||||| || || |||| |||||||||| ||| || |||
Sbjct: 234 ctagctatcaatgagatttttgagaaaaatcctaccactattaagaactatggaatttgg 293
Query: 241 ttgaggtatcagagt 255
|| | |||||||||
Sbjct: 294 ctgcgttatcagagt 308
>gnl|LJGI|TC63438
Length = 901
Score = 129 bits (65), Expect = 1e-29
Identities = 218/269 (81%)
Strand = Plus / Plus
Query: 8 ccttcaggttccatcagtaccaggttgtcgggagggctctccccactgattccgaccagc 67
|||||| ||| || |||||||||||||||||||| |||||||| ||||| | || ||
Sbjct: 103 ccttcaagtttcaccagtaccaggttgtcgggagagctctccctactgaaactgatgtgc 162
Query: 68 accccaagatttaccgcatgaagctctgggccaccaatgaggttcgcgccaagtccaagt 127
| || ||||| || | |||||||||||||| ||||||||||| || ||||| |||||||
Sbjct: 163 atcctaagatctataggatgaagctctgggcaaccaatgaggtccgtgccaaatccaagt 222
Query: 128 tctggtatttcctgaggaaattgaagaaggttaagaagagcaatggtcaagtccttgcta 187
||||||||||| | || || | ||||| || ||||| |||||||| ||||| || || |
Sbjct: 223 tctggtatttcttaagaaagcttaagaaagtcaagaaaagcaatgggcaagtgctcgcca 282
Query: 188 tcaatgagatttttgagaagaacccaaccaagattaagaactttgggatatggttgaggt 247
|||||||||| || ||||| || || ||||||||||| || | ||| || |||||| | |
Sbjct: 283 tcaatgagatcttcgagaaaaatcctaccaagattaaaaattatggaatttggttgcgat 342
Query: 248 atcagagtaggactggctaccacaacatg 276
|||| || | ||||| ||||||||||||
Sbjct: 343 atcaaagccgaactggataccacaacatg 371