Miyakogusa Predicted Gene
- Lj6g3v1919360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1919360.1 CUFF.60210.1
(1069 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 1692 0.0
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 1687 0.0
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 1683 0.0
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 1656 0.0
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 1646 0.0
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 479 e-135
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 478 e-134
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 459 e-129
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 443 e-124
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 443 e-124
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 443 e-124
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 429 e-120
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 421 e-117
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 378 e-104
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 377 e-104
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 374 e-103
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 364 e-100
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 362 e-100
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 357 3e-98
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 351 2e-96
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 308 1e-83
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 262 1e-69
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 259 6e-69
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 243 5e-64
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 239 7e-63
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 228 1e-59
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 227 3e-59
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 227 4e-59
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 219 1e-56
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 216 8e-56
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 169 9e-42
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 169 9e-42
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 169 9e-42
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 163 7e-40
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 154 3e-37
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 135 2e-31
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 118 2e-26
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 109 1e-23
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 108 3e-23
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 107 5e-23
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 106 9e-23
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 97 7e-20
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 95 2e-19
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 94 5e-19
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 93 9e-19
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 93 1e-18
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 92 1e-18
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 91 5e-18
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 90 8e-18
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 89 1e-17
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 89 2e-17
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 85 3e-16
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 81 5e-15
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 78 3e-14
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 70 6e-12
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 68 4e-11
AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 66 1e-10
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 66 1e-10
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 63 1e-09
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 1692 bits (4381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 843/1025 (82%), Positives = 892/1025 (87%), Gaps = 10/1025 (0%)
Query: 42 AVARPASSGDDEVXXXXXXXXXXXXXXXXXXXXXXXQGGDHVDPEIRKREKSRLREMQIM 101
AVAR + S DDEV + + EI KREK+RL+EMQ +
Sbjct: 33 AVARSSGSDDDEVAAADESPVSDGEAAPVEDDYEDEEDEEKA--EISKREKARLKEMQKL 90
Query: 102 KKQKVQEILDAQNAAIDADMNNRGKGRLKYLLQQTELFAHFAKGDQXXXXXXXXXXXXHA 161
KKQK+QE+L++QNA+IDADMNN+GKGRLKYLLQQTELFAHFAK D HA
Sbjct: 91 KKQKIQEMLESQNASIDADMNNKGKGRLKYLLQQTELFAHFAKSDGSSSQKKAKGRGRHA 150
Query: 162 SKVTXXXXXXXXXXXXXDG---SANTRLVTQPACIQGKMRDYQLAGLNWLIRLYENGING 218
SK+T DG S NTRL+TQP+CIQGKMRDYQLAGLNWLIRLYENGING
Sbjct: 151 SKITEEEEDEEYLKEEEDGLTGSGNTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGING 210
Query: 219 ILADEMGLGKTLQTISLLGYLHEFKGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFL 278
ILADEMGLGKTLQTISLL YLHE++GI GPHMVVAPKSTLGNWMNEIRRFCP+LRAVKFL
Sbjct: 211 ILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFL 270
Query: 279 GNPDERRHIREDLLVAGKFDVCVTSFEMAIKEKTASIK---RNIIIDEAHRIKNENSLLS 335
GNP+ERRHIREDLLVAGKFD+CVTSFEMAIKEKTA + R IIIDEAHRIKNENSLLS
Sbjct: 271 GNPEERRHIREDLLVAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLS 330
Query: 336 KTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVV 395
KTMRL+STNYRLLITGTPLQNNLHELW+LLNFLLPEIFSSAETFDEWFQISGENDQQEVV
Sbjct: 331 KTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVV 390
Query: 396 QQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGER 455
QQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE VNAGGER
Sbjct: 391 QQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGER 450
Query: 456 KRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVL 515
KRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVL
Sbjct: 451 KRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVL 510
Query: 516 IFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGG 575
IFSQMTRLLDILEDYLM+RGYLYCRIDGNTGGD+RDASI+A+NKPGSEKFVFLLSTRAGG
Sbjct: 511 IFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGG 570
Query: 576 LGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYK 635
LGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTE IEEKVIERAYK
Sbjct: 571 LGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYK 630
Query: 636 KLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEAT 695
KLALDALVIQQGRLAEQKTVNKDELLQMVR+GAEMVFSSKDSTITDEDIDRIIAKGEEAT
Sbjct: 631 KLALDALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEAT 690
Query: 696 AELDAKMKKFTEDAIKFKMDDTAELYX-XXXXXXXXXXXXXXIVSENWIEPPKRERKRNY 754
AELDAKMKKFTEDAI+FKMDD+A+ Y IVS+NW +PPKRERKRNY
Sbjct: 691 AELDAKMKKFTEDAIQFKMDDSADFYDFDDDNKDENKLDFKKIVSDNWNDPPKRERKRNY 750
Query: 755 SESEYFKQTMRQGGPTKQKEPRIPRRPQLHDFQFFNTHRLTELYEKEVRNLMQAHQKNQI 814
SESEYFKQT+RQG P K KEPRIPR PQLHDFQFFN RLTELYEKEVR LMQ HQKNQ+
Sbjct: 751 SESEYFKQTLRQGAPAKPKEPRIPRMPQLHDFQFFNIQRLTELYEKEVRYLMQTHQKNQL 810
Query: 815 KDSIDVDXXXXXXXXXXXXXXXXXXXXXXXGFSSWSRRDFNTFLRACEKYGRSDIINIAS 874
KD+IDV+ GFS+WSRRDFNTFLRACEKYGR+DI +IAS
Sbjct: 811 KDTIDVEEPEEGGDPLTTEEVEEKEGLLEEGFSTWSRRDFNTFLRACEKYGRNDIKSIAS 870
Query: 875 EMEGKTEEEVERYANVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKN 934
EMEGKTEEEVERYA VFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRY+N
Sbjct: 871 EMEGKTEEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYRN 930
Query: 935 PWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRT 994
PWLELKIQYGQNKGKLYNEECDRFMICM+HKLGYGNWDELKAAFRTS +FRFDWFVKSRT
Sbjct: 931 PWLELKIQYGQNKGKLYNEECDRFMICMIHKLGYGNWDELKAAFRTSSVFRFDWFVKSRT 990
Query: 995 TQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKSMTPSKRAVARQ-TESPSSTKKR 1053
+QELARRCDTLIRL+EKENQE+DERERQARKEKKLAKS TPSKR + RQ +ESPSSTKKR
Sbjct: 991 SQELARRCDTLIRLIEKENQEFDERERQARKEKKLAKSATPSKRPLGRQASESPSSTKKR 1050
Query: 1054 KQLTM 1058
K L+M
Sbjct: 1051 KHLSM 1055
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 1687 bits (4370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 842/1025 (82%), Positives = 891/1025 (86%), Gaps = 11/1025 (1%)
Query: 42 AVARPASSGDDEVXXXXXXXXXXXXXXXXXXXXXXXQGGDHVDPEIRKREKSRLREMQIM 101
AVAR + S DDEV + + EI KREK+RL+EMQ +
Sbjct: 33 AVARSSGSDDDEVAAADESPVSDGEAAPVEDDYEDEEDEEKA--EISKREKARLKEMQKL 90
Query: 102 KKQKVQEILDAQNAAIDADMNNRGKGRLKYLLQQTELFAHFAKGDQXXXXXXXXXXXXHA 161
KKQK+QE+L++QNA+IDADMNN+GKGRLKYLLQQTELFAHFAK D HA
Sbjct: 91 KKQKIQEMLESQNASIDADMNNKGKGRLKYLLQQTELFAHFAKSDGSSSQKKAKGRGRHA 150
Query: 162 SKVTXXXXXXXXXXXXXDG---SANTRLVTQPACIQGKMRDYQLAGLNWLIRLYENGING 218
SK+T DG S NTRL+TQP+CIQGKMRDYQLAGLNWLIRLYENGING
Sbjct: 151 SKITEEEEDEEYLKEEEDGLTGSGNTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGING 210
Query: 219 ILADEMGLGKTLQTISLLGYLHEFKGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFL 278
ILADEMGLGKTLQTISLL YLHE++GI GPHMVVAPKSTLGNWMNEIRRFCP+LRAVKFL
Sbjct: 211 ILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFL 270
Query: 279 GNPDERRHIREDLLVAGKFDVCVTSFEMAIKEKTASIK---RNIIIDEAHRIKNENSLLS 335
GNP+ERRHIREDLLVAGKFD+CVTSFEMAIKEKTA + R IIIDEAHRIKNENSLLS
Sbjct: 271 GNPEERRHIREDLLVAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLS 330
Query: 336 KTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVV 395
KTMRL+STNYRLLITGTPLQNNLHELW+LLNFLLPEIFSSAETFDEWFQISGENDQQEVV
Sbjct: 331 KTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVV 390
Query: 396 QQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGER 455
QQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE VNAGGER
Sbjct: 391 QQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGER 450
Query: 456 KRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVL 515
KRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVL
Sbjct: 451 KRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVL 510
Query: 516 IFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGG 575
IFSQMTRLLDILEDYLM+RGYLYCRIDGNTGGD+RDASI+A+NKPGSEKFVFLLSTRAGG
Sbjct: 511 IFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGG 570
Query: 576 LGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYK 635
LGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTE IEEKVIERAYK
Sbjct: 571 LGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYK 630
Query: 636 KLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEAT 695
KLALDALVIQQGRLAEQKTVNKDELLQMVR+GAEMVFSSKDSTITDEDIDRIIAKGEEAT
Sbjct: 631 KLALDALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEAT 690
Query: 696 AELDAKMKKFTEDAIKFKMDDTAELYX-XXXXXXXXXXXXXXIVSENWIEPPKRERKRNY 754
AELDAKMKKFTEDAI+FKMDD+A+ Y IVS+NW +PPKRERKRNY
Sbjct: 691 AELDAKMKKFTEDAIQFKMDDSADFYDFDDDNKDENKLDFKKIVSDNWNDPPKRERKRNY 750
Query: 755 SESEYFKQTMRQGGPTKQKEPRIPRRPQLHDFQFFNTHRLTELYEKEVRNLMQAHQKNQI 814
SESEYFKQT+RQG P K KEPRIPR PQLHDFQFFN RLTELYEKEVR LMQ HQKNQ+
Sbjct: 751 SESEYFKQTLRQGAPAKPKEPRIPRMPQLHDFQFFNIQRLTELYEKEVRYLMQTHQKNQL 810
Query: 815 KDSIDVDXXXXXXXXXXXXXXXXXXXXXXXGFSSWSRRDFNTFLRACEKYGRSDIINIAS 874
KD+IDV+ FS+WSRRDFNTFLRACEKYGR+DI +IAS
Sbjct: 811 KDTIDVEEPEGGDPLTTEEVEEKEGLLEEG-FSTWSRRDFNTFLRACEKYGRNDIKSIAS 869
Query: 875 EMEGKTEEEVERYANVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKN 934
EMEGKTEEEVERYA VFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRY+N
Sbjct: 870 EMEGKTEEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYRN 929
Query: 935 PWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRT 994
PWLELKIQYGQNKGKLYNEECDRFMICM+HKLGYGNWDELKAAFRTS +FRFDWFVKSRT
Sbjct: 930 PWLELKIQYGQNKGKLYNEECDRFMICMIHKLGYGNWDELKAAFRTSSVFRFDWFVKSRT 989
Query: 995 TQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKSMTPSKRAVARQ-TESPSSTKKR 1053
+QELARRCDTLIRL+EKENQE+DERERQARKEKKLAKS TPSKR + RQ +ESPSSTKKR
Sbjct: 990 SQELARRCDTLIRLIEKENQEFDERERQARKEKKLAKSATPSKRPLGRQASESPSSTKKR 1049
Query: 1054 KQLTM 1058
K L+M
Sbjct: 1050 KHLSM 1054
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 1683 bits (4358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 842/1027 (81%), Positives = 891/1027 (86%), Gaps = 13/1027 (1%)
Query: 42 AVARPASSGDDEVXXXXXXXXXXXXXXXXXXXXXXXQGGDHVDPEIRKREKSRLREMQIM 101
AVAR + S DDEV + + EI KREK+RL+EMQ +
Sbjct: 33 AVARSSGSDDDEVAAADESPVSDGEAAPVEDDYEDEEDEEKA--EISKREKARLKEMQKL 90
Query: 102 KKQKVQEILDAQNAAIDADMNNRGKGRLKYLLQQTELFAHFAKGDQXXXXXXXXXXXXHA 161
KKQK+QE+L++QNA+IDADMNN+GKGRLKYLLQQTELFAHFAK D HA
Sbjct: 91 KKQKIQEMLESQNASIDADMNNKGKGRLKYLLQQTELFAHFAKSDGSSSQKKAKGRGRHA 150
Query: 162 SKVTXXXXXXXXXXXXXDG---SANTRLVTQPACIQGKMRDYQLAGLNWLIRLYENGING 218
SK+T DG S NTRL+TQP+CIQGKMRDYQLAGLNWLIRLYENGING
Sbjct: 151 SKITEEEEDEEYLKEEEDGLTGSGNTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGING 210
Query: 219 ILADEMGLGKTLQTISLLGYLHEFKGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFL 278
ILADEMGLGKTLQTISLL YLHE++GI GPHMVVAPKSTLGNWMNEIRRFCP+LRAVKFL
Sbjct: 211 ILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFL 270
Query: 279 GNPDERRHIREDLLVAGKFDVCVTSFEMAIKEKTASIK---RNIIIDEAHRIKNENSLLS 335
GNP+ERRHIREDLLVAGKFD+CVTSFEMAIKEKTA + R IIIDEAHRIKNENSLLS
Sbjct: 271 GNPEERRHIREDLLVAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLS 330
Query: 336 KTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVV 395
KTMRL+STNYRLLITGTPLQNNLHELW+LLNFLLPEIFSSAETFDEWFQISGENDQQEVV
Sbjct: 331 KTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVV 390
Query: 396 QQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGER 455
QQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE VNAGGER
Sbjct: 391 QQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGER 450
Query: 456 KRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVL 515
KRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVL
Sbjct: 451 KRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVL 510
Query: 516 IFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGG 575
IFSQMTRLLDILEDYLM+RGYLYCRIDGNTGGD+RDASI+A+NKPGSEKFVFLLSTRAGG
Sbjct: 511 IFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGG 570
Query: 576 LGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYK 635
LGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTE IEEKVIERAYK
Sbjct: 571 LGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYK 630
Query: 636 KLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEAT 695
KLALDALVIQQGRLAEQKTVNKDELLQMVR+GAEMVFSSKDSTITDEDIDRIIAKGEEAT
Sbjct: 631 KLALDALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEAT 690
Query: 696 AELDAKMKKFTEDAIKFKMDDT--AELYX-XXXXXXXXXXXXXXIVSENWIEPPKRERKR 752
AELDAKMKKFTEDAI+FKMDD+ A+ Y IVS+NW +PPKRERKR
Sbjct: 691 AELDAKMKKFTEDAIQFKMDDSKGADFYDFDDDNKDENKLDFKKIVSDNWNDPPKRERKR 750
Query: 753 NYSESEYFKQTMRQGGPTKQKEPRIPRRPQLHDFQFFNTHRLTELYEKEVRNLMQAHQKN 812
NYSESEYFKQT+RQG P K KEPRIPR PQLHDFQFFN RLTELYEKEVR LMQ HQKN
Sbjct: 751 NYSESEYFKQTLRQGAPAKPKEPRIPRMPQLHDFQFFNIQRLTELYEKEVRYLMQTHQKN 810
Query: 813 QIKDSIDVDXXXXXXXXXXXXXXXXXXXXXXXGFSSWSRRDFNTFLRACEKYGRSDIINI 872
Q+KD+IDV+ FS+WSRRDFNTFLRACEKYGR+DI +I
Sbjct: 811 QLKDTIDVEEPEGGDPLTTEEVEEKEGLLEEG-FSTWSRRDFNTFLRACEKYGRNDIKSI 869
Query: 873 ASEMEGKTEEEVERYANVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRY 932
ASEMEGKTEEEVERYA VFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRY
Sbjct: 870 ASEMEGKTEEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRY 929
Query: 933 KNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKS 992
+NPWLELKIQYGQNKGKLYNEECDRFMICM+HKLGYGNWDELKAAFRTS +FRFDWFVKS
Sbjct: 930 RNPWLELKIQYGQNKGKLYNEECDRFMICMIHKLGYGNWDELKAAFRTSSVFRFDWFVKS 989
Query: 993 RTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKSMTPSKRAVARQ-TESPSSTK 1051
RT+QELARRCDTLIRL+EKENQE+DERERQARKEKKLAKS TPSKR + RQ +ESPSSTK
Sbjct: 990 RTSQELARRCDTLIRLIEKENQEFDERERQARKEKKLAKSATPSKRPLGRQASESPSSTK 1049
Query: 1052 KRKQLTM 1058
KRK L+M
Sbjct: 1050 KRKHLSM 1056
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 1656 bits (4288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 830/992 (83%), Positives = 880/992 (88%), Gaps = 9/992 (0%)
Query: 87 IRKREKSRLREMQIMKKQKVQEILDAQNAAIDADMNNRGKGRLKYLLQQTELFAHFAKGD 146
I KREK+RL+EMQ MKKQK+Q+ILD+QNA+IDADMNN+GKGR+KYLLQQTELFAHFAK D
Sbjct: 81 ISKREKARLKEMQKMKKQKIQQILDSQNASIDADMNNKGKGRIKYLLQQTELFAHFAKSD 140
Query: 147 QXXXXXXXXXXXXHASKVTXXXXXXXXXXXXXDG---SANTRLVTQPACIQGKMRDYQLA 203
H+SK+T G S TRL+TQPACIQGK+RDYQLA
Sbjct: 141 PSPSQKKGKGRGRHSSKLTEEEEDEECLKEEEGGIVGSGGTRLLTQPACIQGKLRDYQLA 200
Query: 204 GLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKGPHMVVAPKSTLGNWMN 263
GLNWLIRLYENGINGILADEMGLGKTLQTISLL YLHE++GI GPHMVVAPKSTLGNWMN
Sbjct: 201 GLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMN 260
Query: 264 EIRRFCPILRAVKFLGNPDERRHIREDLLVAGKFDVCVTSFEMAIKEKTASIK---RNII 320
EIRRFCP+LRAVKFLGNP+ERRHIRE+LLVAGKFD+CVTSFEMAIKEKT + R II
Sbjct: 261 EIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAIKEKTTLRRFSWRYII 320
Query: 321 IDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFD 380
IDEAHRIKNENSLLSKTMRL+STNYRLLITGTPLQNNLHELW+LLNFLLPE+FSSAETFD
Sbjct: 321 IDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFD 380
Query: 381 EWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKA 440
EWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKA
Sbjct: 381 EWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKA 440
Query: 441 LLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLL 500
LLQKDLEVVN GGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHL+TNAGKMVLL
Sbjct: 441 LLQKDLEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLVTNAGKMVLL 500
Query: 501 DKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKP 560
DKLLPKLK+RDSRVLIFSQMTRLLDILEDYLM+RGY YCRIDGNTGGD+RDASI+A+NKP
Sbjct: 501 DKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKP 560
Query: 561 GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFC 620
GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFC
Sbjct: 561 GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFC 620
Query: 621 TEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSKDSTIT 680
TE IE KVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVR+GAEMVFSSKDSTIT
Sbjct: 621 TENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTIT 680
Query: 681 DEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYX-XXXXXXXXXXXXXXIVS 739
DEDIDRIIAKGEEATAELDAKMKKFTEDAI+FKMDD+A+ Y IVS
Sbjct: 681 DEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSADFYDFDDDNKDESKVDFKKIVS 740
Query: 740 ENWIEPPKRERKRNYSESEYFKQTMRQGGPTKQKEPRIPRRPQLHDFQFFNTHRLTELYE 799
ENW +PPKRERKRNYSE EYFKQT+RQG P K KEPRIPR PQLHDFQFFN RLTELYE
Sbjct: 741 ENWNDPPKRERKRNYSEVEYFKQTLRQGAPAKPKEPRIPRMPQLHDFQFFNIQRLTELYE 800
Query: 800 KEVRNLMQAHQKNQIKDSIDVDXXXXXXXXXXXXXXXXXXXXXXXGFSSWSRRDFNTFLR 859
KEVR LMQAHQK Q+KD+I+VD GFS+WSRRDFN F+R
Sbjct: 801 KEVRYLMQAHQKTQMKDTIEVDEPEEVGDPLTAEEVEEKELLLEEGFSTWSRRDFNAFIR 860
Query: 860 ACEKYGRSDIINIASEMEGKTEEEVERYANVFKERYKELNDYDRIIKNIERGEARISRKD 919
ACEKYGR+DI +IASEMEGKTEEEVERYA VF+ RYKELNDYDRIIKNIERGEARISRKD
Sbjct: 861 ACEKYGRNDIKSIASEMEGKTEEEVERYAQVFQVRYKELNDYDRIIKNIERGEARISRKD 920
Query: 920 EIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFR 979
EIMKAIGKKLDRY+NPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFR
Sbjct: 921 EIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFR 980
Query: 980 TSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKSMTPSKRA 1039
TSPLFRFDWFVKSRTTQELARRCDTLIRL+EKENQE+DERERQARKEKKL+KS TPSKR
Sbjct: 981 TSPLFRFDWFVKSRTTQELARRCDTLIRLIEKENQEFDERERQARKEKKLSKSATPSKRP 1040
Query: 1040 VARQT-ESPSS-TKKRKQLTMDDYASTGKKKK 1069
RQ ESPSS KKRKQL+MDDY S+GK++K
Sbjct: 1041 SGRQANESPSSLLKKRKQLSMDDYVSSGKRRK 1072
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 1646 bits (4263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 829/992 (83%), Positives = 878/992 (88%), Gaps = 12/992 (1%)
Query: 87 IRKREKSRLREMQIMKKQKVQEILDAQNAAIDADMNNRGKGRLKYLLQQTELFAHFAKGD 146
I KREK+RL+EMQ MKKQK+Q+ILD+QNA+IDADMNN+GKGR+KYLLQQTELFAHFAK D
Sbjct: 81 ISKREKARLKEMQKMKKQKIQQILDSQNASIDADMNNKGKGRIKYLLQQTELFAHFAKSD 140
Query: 147 QXXXXXXXXXXXXHASKVTXXXXXXXXXXXXXDG---SANTRLVTQPACIQGKMRDYQLA 203
H+SK+T G S TRL+TQPACIQGK+RDYQLA
Sbjct: 141 PSPSQKKGKGRGRHSSKLTEEEEDEECLKEEEGGIVGSGGTRLLTQPACIQGKLRDYQLA 200
Query: 204 GLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKGPHMVVAPKSTLGNWMN 263
GLNWLIRLYENGINGILADEMGLGKTLQTISLL YLHE++GI GPHMVVAPKSTLGNWMN
Sbjct: 201 GLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMN 260
Query: 264 EIRRFCPILRAVKFLGNPDERRHIREDLLVAGKFDVCVTSFEMAIKEKTASIK---RNII 320
EIRRFCP+LRAVKFLGNP+ERRHIRE+LLVAGKFD+CVTSFEMAIKEKT + R II
Sbjct: 261 EIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAIKEKTTLRRFSWRYII 320
Query: 321 IDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFD 380
IDEAHRIKNENSLLSKTMRL+STNYRLLITGTPLQNNLHELW+LLNFLLPE+FSSAETFD
Sbjct: 321 IDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFD 380
Query: 381 EWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKA 440
EWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKA
Sbjct: 381 EWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKA 440
Query: 441 LLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLL 500
LLQKDLEVVN GGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHL+TNAGKMVLL
Sbjct: 441 LLQKDLEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLVTNAGKMVLL 500
Query: 501 DKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKP 560
DKLLPKLK+RDSRVLIFSQMTRLLDILEDYLM+RGY YCRIDGNTGGD+RDASI+A+NKP
Sbjct: 501 DKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKP 560
Query: 561 GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFC 620
GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFC
Sbjct: 561 GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFC 620
Query: 621 TEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSKDSTIT 680
TE IE KVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVR+GAEMVFSSKDSTIT
Sbjct: 621 TENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTIT 680
Query: 681 DEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYX-XXXXXXXXXXXXXXIVS 739
DEDIDRIIAKGEEATAELDAKMKKFTEDAI+FKMDD+A+ Y IVS
Sbjct: 681 DEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSADFYDFDDDNKDESKVDFKKIVS 740
Query: 740 ENWIEPPKRERKRNYSESEYFKQTMRQGGPTKQKEPRIPRRPQLHDFQFFNTHRLTELYE 799
ENW +PPKRERKRNYSE EYFKQT+RQG P K KEPRIPR PQLHDFQFFN RLTELYE
Sbjct: 741 ENWNDPPKRERKRNYSEVEYFKQTLRQGAPAKPKEPRIPRMPQLHDFQFFNIQRLTELYE 800
Query: 800 KEVRNLMQAHQKNQIKDSIDVDXXXXXXXXXXXXXXXXXXXXXXXGFSSWSRRDFNTFLR 859
KEVR LMQAHQK Q+KD+I+VD GFS+WSRRDFN F+R
Sbjct: 801 KEVRYLMQAHQKTQMKDTIEVDEPEEVGDPLTAEEVEEKELLLEEGFSTWSRRDFNAFIR 860
Query: 860 ACEKYGRSDIINIASEMEGKTEEEVERYANVFKERYKELNDYDRIIKNIERGEARISRKD 919
ACEKYGR+DI +IASEMEGKTEEEVERYA VF+ RYKELNDYDRIIKNIERGEARISRKD
Sbjct: 861 ACEKYGRNDIKSIASEMEGKTEEEVERYAQVFQVRYKELNDYDRIIKNIERGEARISRKD 920
Query: 920 EIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFR 979
EIMKAIGKKLDRY+NPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFR
Sbjct: 921 EIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFR 980
Query: 980 TSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKSMTPSKRA 1039
TSPLFRFDWFVKSRTTQELARRCDTLIRL+EKENQE+DERERQARKEKKL+KS TPSKR
Sbjct: 981 TSPLFRFDWFVKSRTTQELARRCDTLIRLIEKENQEFDERERQARKEKKLSKSATPSKRP 1040
Query: 1040 VARQT-ESPSS-TKKRKQLTMDDYASTGKKKK 1069
RQ ESPSS KKRKQL+MDDY GK++K
Sbjct: 1041 SGRQANESPSSLLKKRKQLSMDDY---GKRRK 1069
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/532 (47%), Positives = 353/532 (66%), Gaps = 26/532 (4%)
Query: 181 SANTRLVTQPACIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYL 239
S ++ QP+ ++G ++R YQL GL W++ L+ N +NGILADEMGLGKT+QTISL+ YL
Sbjct: 386 SIQEKVTEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYL 445
Query: 240 HEFKGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAGKFDV 299
E KG+ GP+++VAPK+ L NW+NE + P + A + G +ER+ IRE + GKF+V
Sbjct: 446 LENKGVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGKFNV 505
Query: 300 CVTSFEMAIKEKTASIKR----NIIIDEAHRIKNENSLLSKTMRL-YSTNYRLLITGTPL 354
+T +++ +++K A +K+ +I+DE HR+KN S L+KT+ Y RLL+TGTP+
Sbjct: 506 LITHYDLIMRDK-AFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPI 564
Query: 355 QNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEN-------DQQE--VVQQLHKVLRPF 405
QN+L ELWSLLNFLLP IF+S + F+EWF + D++E ++ +LH V+RPF
Sbjct: 565 QNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSLTDEEELLIIHRLHHVIRPF 624
Query: 406 LLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAG-GERKRLLNIAMQ 464
+LRR K +VEK LP K + ILK MS QK YYK + + G G+ K L N+ MQ
Sbjct: 625 ILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKSLQNLTMQ 684
Query: 465 LRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLL 524
LRKCCNHPYLF G + ++ +GK LLD+LLPKL++ R+L+FSQMTRL+
Sbjct: 685 LRKCCNHPYLFVGGDYN--MWKKPEIVRASGKFELLDRLLPKLRKAGHRILLFSQMTRLI 742
Query: 525 DILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATAD 584
D+LE YL Y Y R+DG T D R + FN+P S F+FLLSTRAGGLG+NL TAD
Sbjct: 743 DVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTAD 802
Query: 585 VVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVI 644
VI++DSDWNPQ+D QA+DRAHRIGQKKEV+VF + ++EE ++ERA +K+ +DA VI
Sbjct: 803 TVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVI 862
Query: 645 QQGRLAEQKTVN--KDELLQMVRFGAEMVFSSKDSTITDE-DIDRIIAKGEE 693
Q G T ++ L +++R G SS + + E +I+R+ A+ E+
Sbjct: 863 QAGLFNTTSTAQDRREMLEEIMRKGT----SSLGTDVPSEREINRLAARSED 910
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/530 (47%), Positives = 353/530 (66%), Gaps = 23/530 (4%)
Query: 181 SANTRLVTQPACIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYL 239
S ++ QP+ +QG ++R YQL GL W++ LY N NGILADEMGLGKT+QTI+L+ YL
Sbjct: 369 SIQEKVTKQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYL 428
Query: 240 HEFKGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAGKFDV 299
E K + GPH+++APK+ L NW NE + P + A + G+ ++R IR + GKF+V
Sbjct: 429 LESKDLHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRARI-AGGKFNV 487
Query: 300 CVTSFEMAIKEKTASIKR----NIIIDEAHRIKNENSLLSKTMRL-YSTNYRLLITGTPL 354
+T +++ +++K A +K+ +I+DE HR+KN L+KT+ Y RLL+TGTP+
Sbjct: 488 LITHYDLIMRDK-AFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPI 546
Query: 355 QNNLHELWSLLNFLLPEIFSSAETFDEWFQI-------SGENDQQE--VVQQLHKVLRPF 405
QN+L ELWSLLNFLLP IF+S F+EWF + D++E ++ +LH V+RPF
Sbjct: 547 QNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIRPF 606
Query: 406 LLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAG-GERKRLLNIAMQ 464
LLRR KS+VEK LP K + ILK MS QK YYK + +++G G+ K L N+ MQ
Sbjct: 607 LLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSLQNLTMQ 666
Query: 465 LRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLL 524
LRKCCNHPYLF GA+ ++ +GK LLD+LLPKLK+ R+L+FSQMTRL+
Sbjct: 667 LRKCCNHPYLFVGADYN--MCKKPEIVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLI 724
Query: 525 DILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATAD 584
D+LE YL Y+Y R+DG+T D R + FN+P S F+FLLSTRAGGLG+NL TAD
Sbjct: 725 DLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTAD 784
Query: 585 VVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVI 644
+I++DSDWNPQ+D QA+DRAHRIGQKKEV+VF + +IEE ++ERA +K+ +DA VI
Sbjct: 785 TIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKVI 844
Query: 645 QQGRLAEQKTV-NKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEE 693
Q G T ++ E+L+ + ++ S + ++ +I+R+ A+ EE
Sbjct: 845 QAGLFNTTSTAQDRREMLEEIM--SKGTSSLGEDVPSEREINRLAARTEE 892
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/549 (45%), Positives = 357/549 (65%), Gaps = 35/549 (6%)
Query: 180 GSANTR-LVTQPA-CIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLG 237
G A+ R L QP I G +RDYQL GLN+L+ + N N ILADEMGLGKT+Q++S+LG
Sbjct: 606 GKASLRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLG 665
Query: 238 YLHEFKGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIRE-------D 290
+L + I GP +VV P STL NW E R++ P + + ++G R ++
Sbjct: 666 FLQNTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKK 725
Query: 291 LLVAGKFDVCVTSFEMAIKEKTASIKRN---IIIDEAHRIKNENSLLSKTMRLYSTNYRL 347
+ KF+ +T++E+ +K+K K +++DEAHR+KN + L + +ST +L
Sbjct: 726 VGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKL 785
Query: 348 LITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLL 407
LITGTPLQN++ ELW+LL+FL P F + + F E ++ ++ E+ LH LRP +L
Sbjct: 786 LITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESELAN-LHLELRPHIL 844
Query: 408 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAG--GERKRLLNIAMQL 465
RR+ DVEK LPPK E IL+V MS +QKQYYK +L+++ +N G G + LLNI ++L
Sbjct: 845 RRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVEL 904
Query: 466 RKCCNHPYLFQGAEPGPPYTTGDH-----LITNAGKMVLLDKLLPKLKERDSRVLIFSQM 520
+KCCNHP+LF+ A+ G D+ +I ++GK+V+LDKLL +L+E RVLIFSQM
Sbjct: 905 KKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVLIFSQM 964
Query: 521 TRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINL 580
R+LDIL +YL RG+ + R+DG+T + R ++D FN P S+ F FLLSTRAGGLGINL
Sbjct: 965 VRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINL 1024
Query: 581 ATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALD 640
ATAD V+++DSDWNPQ DLQA RAHRIGQ++ V ++RF T ++EE+++ERA +K+ LD
Sbjct: 1025 ATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLD 1084
Query: 641 ALVIQ----QGRLAEQKT-----VNKDELLQMVRFGAEMVFSSKDST------ITDEDID 685
LVIQ +GRL +++T +K+EL ++RFGAE +F + + DID
Sbjct: 1085 HLVIQKLNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKEDKNDEESKKRLLSMDID 1144
Query: 686 RIIAKGEEA 694
I+ + E+
Sbjct: 1145 EILERAEQV 1153
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/486 (48%), Positives = 313/486 (64%), Gaps = 32/486 (6%)
Query: 189 QPAC-IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKG 247
QP+ + GK+R+YQ+ GL WL+ LY N +NGILADEMGLGKT+Q ISL+ YL E K +G
Sbjct: 745 QPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRG 804
Query: 248 PHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAGKFDVCVTSFEMA 307
P +VV P S L W +EI + P + + + G PDERR + ++ +V KF+V +T++E
Sbjct: 805 PFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYL 864
Query: 308 I----KEKTASIK-RNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELW 362
+ + K + I IIIDE HRIKN + L+ ++ Y +++RLL+TGTPLQNNL ELW
Sbjct: 865 MNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELW 924
Query: 363 SLLNFLLPEIFSSAETFDEWF----QISGENDQQE----------VVQQLHKVLRPFLLR 408
+LLNFLLP IF+S+E F +WF Q +GE+ +E ++ +LH+VLRPF+LR
Sbjct: 925 ALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLR 984
Query: 409 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE--VVNAGGERKRLL-NIAMQL 465
RLK VE LP K E +++ S QK LL K +E + + G + R + N M+L
Sbjct: 985 RLKHKVENELPEKIERLIRCEASAYQK-----LLMKRVEDNLGSIGNAKSRAVHNSVMEL 1039
Query: 466 RKCCNHPYLFQGAEPGPPYTTGDHLITN----AGKMVLLDKLLPKLKERDSRVLIFSQMT 521
R CNHPYL Q H + GK+ +LD++LPKLK D RVL FS MT
Sbjct: 1040 RNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMT 1099
Query: 522 RLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLA 581
RLLD++EDYL +GY Y R+DG T G DR A ID FNK GS F+FLLS RAGG+G+NL
Sbjct: 1100 RLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQ 1159
Query: 582 TADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDA 641
AD VIL+D+DWNPQVDLQAQ RAHRIGQKK+V V RF T ++EE+V A KL +
Sbjct: 1160 AADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVAN 1219
Query: 642 LVIQQG 647
I G
Sbjct: 1220 QSITAG 1225
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/486 (48%), Positives = 313/486 (64%), Gaps = 32/486 (6%)
Query: 189 QPAC-IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKG 247
QP+ + GK+R+YQ+ GL WL+ LY N +NGILADEMGLGKT+Q ISL+ YL E K +G
Sbjct: 745 QPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRG 804
Query: 248 PHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAGKFDVCVTSFEMA 307
P +VV P S L W +EI + P + + + G PDERR + ++ +V KF+V +T++E
Sbjct: 805 PFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYL 864
Query: 308 I----KEKTASIK-RNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELW 362
+ + K + I IIIDE HRIKN + L+ ++ Y +++RLL+TGTPLQNNL ELW
Sbjct: 865 MNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELW 924
Query: 363 SLLNFLLPEIFSSAETFDEWF----QISGENDQQE----------VVQQLHKVLRPFLLR 408
+LLNFLLP IF+S+E F +WF Q +GE+ +E ++ +LH+VLRPF+LR
Sbjct: 925 ALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLR 984
Query: 409 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE--VVNAGGERKRLL-NIAMQL 465
RLK VE LP K E +++ S QK LL K +E + + G + R + N M+L
Sbjct: 985 RLKHKVENELPEKIERLIRCEASAYQK-----LLMKRVEDNLGSIGNAKSRAVHNSVMEL 1039
Query: 466 RKCCNHPYLFQGAEPGPPYTTGDHLITN----AGKMVLLDKLLPKLKERDSRVLIFSQMT 521
R CNHPYL Q H + GK+ +LD++LPKLK D RVL FS MT
Sbjct: 1040 RNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMT 1099
Query: 522 RLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLA 581
RLLD++EDYL +GY Y R+DG T G DR A ID FNK GS F+FLLS RAGG+G+NL
Sbjct: 1100 RLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQ 1159
Query: 582 TADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDA 641
AD VIL+D+DWNPQVDLQAQ RAHRIGQKK+V V RF T ++EE+V A KL +
Sbjct: 1160 AADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVAN 1219
Query: 642 LVIQQG 647
I G
Sbjct: 1220 QSITAG 1225
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/486 (48%), Positives = 313/486 (64%), Gaps = 32/486 (6%)
Query: 189 QPAC-IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKG 247
QP+ + GK+R+YQ+ GL WL+ LY N +NGILADEMGLGKT+Q ISL+ YL E K +G
Sbjct: 745 QPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRG 804
Query: 248 PHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAGKFDVCVTSFEMA 307
P +VV P S L W +EI + P + + + G PDERR + ++ +V KF+V +T++E
Sbjct: 805 PFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYL 864
Query: 308 I----KEKTASIK-RNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELW 362
+ + K + I IIIDE HRIKN + L+ ++ Y +++RLL+TGTPLQNNL ELW
Sbjct: 865 MNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELW 924
Query: 363 SLLNFLLPEIFSSAETFDEWF----QISGENDQQE----------VVQQLHKVLRPFLLR 408
+LLNFLLP IF+S+E F +WF Q +GE+ +E ++ +LH+VLRPF+LR
Sbjct: 925 ALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLR 984
Query: 409 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE--VVNAGGERKRLL-NIAMQL 465
RLK VE LP K E +++ S QK LL K +E + + G + R + N M+L
Sbjct: 985 RLKHKVENELPEKIERLIRCEASAYQK-----LLMKRVEDNLGSIGNAKSRAVHNSVMEL 1039
Query: 466 RKCCNHPYLFQGAEPGPPYTTGDHLITN----AGKMVLLDKLLPKLKERDSRVLIFSQMT 521
R CNHPYL Q H + GK+ +LD++LPKLK D RVL FS MT
Sbjct: 1040 RNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMT 1099
Query: 522 RLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLA 581
RLLD++EDYL +GY Y R+DG T G DR A ID FNK GS F+FLLS RAGG+G+NL
Sbjct: 1100 RLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQ 1159
Query: 582 TADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDA 641
AD VIL+D+DWNPQVDLQAQ RAHRIGQKK+V V RF T ++EE+V A KL +
Sbjct: 1160 AADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVAN 1219
Query: 642 LVIQQG 647
I G
Sbjct: 1220 QSITAG 1225
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/549 (42%), Positives = 339/549 (61%), Gaps = 45/549 (8%)
Query: 190 PACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKGPH 249
P G+++ YQL G+ WLI L++NG+NGILAD+MGLGKT+QTI L +L + G+ GP+
Sbjct: 195 PLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHL-KGNGLDGPY 253
Query: 250 MVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLL---VAGKFDVCVTSFEM 306
+V+AP STL NW NEI RF P + A+ + G+ ++R +R + V KF + +TS+E+
Sbjct: 254 LVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEV 313
Query: 307 AIKEKTASIK----RNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELW 362
A+ + ++ + ++IDE HR+KN L + ++ + +LL+TGTPLQNNL ELW
Sbjct: 314 AMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELW 373
Query: 363 SLLNFLLPEIFSSAETFDEWFQISGENDQQ-----------EVVQQLHKVLRPFLLRRLK 411
SLLNF+LP+IF+S + F+ WF S +N + +VV +LH +LRPF+LRR+K
Sbjct: 374 SLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMK 433
Query: 412 SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEV------VNAGGERKRLLNIAMQL 465
DVE LP KKE I+ M+ QK++ + L+ LE + G + +L N+ +QL
Sbjct: 434 CDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVIQL 493
Query: 466 RKCCNHPYLFQGAEPG----PPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMT 521
RK CNHP L QG G PP + ++ GK LL++LL +L + +VLIFSQ T
Sbjct: 494 RKNCNHPDLLQGQIDGSYLYPPV---EEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWT 550
Query: 522 RLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLA 581
+LLDI++ Y +G+ CRIDG+ D+R I F+ S +FLLSTRAGGLGINL
Sbjct: 551 KLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLT 610
Query: 582 TADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDA 641
AD ILYDSDWNPQ+DLQA DR HRIGQ K V V+R T +IE +V++RAY KL L+
Sbjct: 611 AADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEH 670
Query: 642 LVIQQGRLAEQKT-----VNKDELLQMVRFGAEMVFSSKDSTITDEDIDR--------II 688
+VI QG+ +++ + ++++L +++ + I+D D+DR I
Sbjct: 671 VVIGQGQFHQERAKSSTPLEEEDILALLKEDETAEDKLIQTDISDADLDRLLDRSDLTIT 730
Query: 689 AKGEEATAE 697
A GE AE
Sbjct: 731 APGETQAAE 739
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/517 (45%), Positives = 324/517 (62%), Gaps = 39/517 (7%)
Query: 190 PACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKGPH 249
P ++G + YQL GLN+L + + ILADEMGLGKT+Q+I+LL L E I PH
Sbjct: 266 PEFLKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLI--PH 323
Query: 250 MVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAG-------------- 295
+V+AP STL NW E + P + V + G R IRE
Sbjct: 324 LVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQI 383
Query: 296 ---------KFDVCVTSFEMAIKEKTASIK----RNIIIDEAHRIKNENSLLSKTMRLYS 342
KFDV +TS+EM I +A +K +I+DE HR+KN++S L ++ YS
Sbjct: 384 SSESKQKRIKFDVLLTSYEM-INLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYS 442
Query: 343 TNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVL 402
+N+R+L+TGTPLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LHK+L
Sbjct: 443 SNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKML 499
Query: 403 RPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNA-GGERKRLLNI 461
P LLRR+K DV K +PPKKE IL+V +S +QK+YYKA+ ++ +V+ GG + L NI
Sbjct: 500 APHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGAQISLNNI 559
Query: 462 AMQLRKCCNHPYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQ 519
M+LRK C HPY+ +G EP L+ + GK+ LLDK++ KLKE+ RVLI++Q
Sbjct: 560 MMELRKVCCHPYMLEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQ 619
Query: 520 MTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGIN 579
+LD+LEDY + + Y RIDG GG +R ID FN S KF FLLSTRAGGLGIN
Sbjct: 620 FQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGIN 679
Query: 580 LATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLAL 639
LATAD VI+YDSDWNP DLQA RAHR+GQ +V ++R TIEE++++ KK+ L
Sbjct: 680 LATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVL 739
Query: 640 DALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSKD 676
+ LV+ G+L Q +N++EL ++R+G++ +F+S+D
Sbjct: 740 EHLVV--GKLKTQ-NINQEELDDIIRYGSKELFASED 773
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/501 (41%), Positives = 307/501 (61%), Gaps = 33/501 (6%)
Query: 190 PACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKGPH 249
P + G + YQL GLN+L + N ILADEMGLGKT+Q+I+ L L F+ PH
Sbjct: 218 PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASL--FEENLSPH 275
Query: 250 MVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLV-----AGKFDVCVTSF 304
+VVAP ST+ NW E + P + V + G+ + R I E KFDV +T++
Sbjct: 276 LVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTTY 335
Query: 305 EM---AIKEKTASIKRNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHEL 361
EM I + +IIDE HR+KN+ S L ++ +++ + +L+TGTPLQNNL+EL
Sbjct: 336 EMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNEL 395
Query: 362 WSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG-LPP 420
++L++FL + F S E F + +++E + +LH++L P LLRRLK DV K +PP
Sbjct: 396 FALMHFLDADKFGSLEKFQDI-------NKEEQISRLHQMLAPHLLRRLKKDVLKDKVPP 448
Query: 421 KKETILKVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEP 480
KKE IL+V MS QK+ YKA++ + +V+ + K + N+ M+LR+ C+HPYL EP
Sbjct: 449 KKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAK-ISNVLMKLRQVCSHPYLLPDFEP 507
Query: 481 -----GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRG 535
+T L+ +GK+ LLDK++ KLKE+ RVLI++Q L +LEDY F+
Sbjct: 508 RFEDANEAFTK---LLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKN 564
Query: 536 YLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNP 595
+ Y RIDG G +R ID FN S +F FLLSTRAGG+GINLATAD VI+YDSDWNP
Sbjct: 565 WNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNP 624
Query: 596 QVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTV 655
DLQA R HR+GQ +V ++R + T+EE+++E K+ L+ LV+ + L +
Sbjct: 625 HADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGKQHLCQ---- 680
Query: 656 NKDELLQMVRFGAEMVFSSKD 676
DEL ++++G++ +FS ++
Sbjct: 681 --DELDDIIKYGSKELFSEEN 699
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/501 (41%), Positives = 307/501 (61%), Gaps = 33/501 (6%)
Query: 190 PACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKGPH 249
P + G + YQL GLN+L + N ILADEMGLGKT+Q+I+ L L F+ PH
Sbjct: 177 PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASL--FEENLSPH 234
Query: 250 MVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLV-----AGKFDVCVTSF 304
+VVAP ST+ NW E + P + V + G+ + R I E KFDV +T++
Sbjct: 235 LVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTTY 294
Query: 305 EM---AIKEKTASIKRNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHEL 361
EM I + +IIDE HR+KN+ S L ++ +++ + +L+TGTPLQNNL+EL
Sbjct: 295 EMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNEL 354
Query: 362 WSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG-LPP 420
++L++FL + F S E F + +++E + +LH++L P LLRRLK DV K +PP
Sbjct: 355 FALMHFLDADKFGSLEKFQDI-------NKEEQISRLHQMLAPHLLRRLKKDVLKDKVPP 407
Query: 421 KKETILKVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEP 480
KKE IL+V MS QK+ YKA++ + +V+ + K + N+ M+LR+ C+HPYL EP
Sbjct: 408 KKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAK-ISNVLMKLRQVCSHPYLLPDFEP 466
Query: 481 -----GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRG 535
+T L+ +GK+ LLDK++ KLKE+ RVLI++Q L +LEDY F+
Sbjct: 467 RFEDANEAFTK---LLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKN 523
Query: 536 YLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNP 595
+ Y RIDG G +R ID FN S +F FLLSTRAGG+GINLATAD VI+YDSDWNP
Sbjct: 524 WNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNP 583
Query: 596 QVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTV 655
DLQA R HR+GQ +V ++R + T+EE+++E K+ L+ LV+ + L +
Sbjct: 584 HADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGKQHLCQ---- 639
Query: 656 NKDELLQMVRFGAEMVFSSKD 676
DEL ++++G++ +FS ++
Sbjct: 640 --DELDDIIKYGSKELFSEEN 658
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/506 (41%), Positives = 315/506 (62%), Gaps = 28/506 (5%)
Query: 188 TQPAC----IQGKMRDYQLAGLNWLIRLYENGINGIL-ADEMGLGKTLQTISLLGYLHEF 242
T P C + ++ +Q+ G++WLI+ Y G+N +L D+MGLGKTLQ IS L YL
Sbjct: 38 TPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFR 97
Query: 243 KGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAGKF---DV 299
+G+ GP +V+ P S W++EI RF P L ++++G+ R +R+ + G F DV
Sbjct: 98 QGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHGHFLPFDV 157
Query: 300 CVTSFEMAIKEK--TASIK-RNIIIDEAHRIKNENSLLSKTM-RLYSTNYRLLITGTPLQ 355
+T++++A+ ++ + I + IIDEA R+KN NS+L + + RLLITGTP+Q
Sbjct: 158 LLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQ 217
Query: 356 NNLHELWSLLNFLLPEIFSSAETFDEWFQISGE----NDQQEVVQQLHKVLRPFLLRRLK 411
NNL ELW+L++F +P +F + + F F+ +G+ ++ +E + L +L F+LRR K
Sbjct: 218 NNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLDVSNDKETYKSLKFILGAFMLRRTK 277
Query: 412 SD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDL----EVVNAGGERKRLLNIAM 463
S +E G LPP E + V + +QK+ Y ++L+K+L E+ + G L NI +
Sbjct: 278 SLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVI 337
Query: 464 QLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRL 523
QLRK C+HPYLF G EP P+ G+HL+ +GK+++LD+LL +L + RVL+FSQMT
Sbjct: 338 QLRKACSHPYLFPGIEP-EPFEEGEHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTST 396
Query: 524 LDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATA 583
LDIL+D++ R Y Y R+DG+ ++R A+I F+ GS FVF++STRAGG+G+NL A
Sbjct: 397 LDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSVDGSNAFVFMISTRAGGVGLNLVAA 456
Query: 584 DVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALV 643
D VI Y+ DWNPQVD QA RAHRIGQ V TE+++EE ++ RA +KL L V
Sbjct: 457 DTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNV 516
Query: 644 IQQGRLAEQKTVNKDELLQMVRFGAE 669
+ G E+K + +L +V FG +
Sbjct: 517 V--GDNMEEKEEDGGDLRSLV-FGLQ 539
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/568 (39%), Positives = 331/568 (58%), Gaps = 48/568 (8%)
Query: 186 LVTQPACIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKG 244
L QP ++G + +QL LNWL R + N ILADEMGLGKT+ + L L+ G
Sbjct: 677 LTEQPQELRGGALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFG 736
Query: 245 IKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIRE------------DLL 292
+ P +V+ P ST+ NW++E + P+L V++ G+ R IR+
Sbjct: 737 VARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKP 796
Query: 293 VAGKFDVCVTSFEMAIKEKTASIKRNI-----IIDEAHRIKNENSLLSKTMRLYSTNYRL 347
+ KF+V +T++EM + + +S R + ++DE HR+KN S L + +S +R+
Sbjct: 797 TSYKFNVLLTTYEMVLAD--SSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRV 854
Query: 348 LITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLL 407
L+TGTPLQNN+ E+++LLNFL P F S +F+E F + E V++L K++ P +L
Sbjct: 855 LLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERFH---DLTSAEKVEELKKLVAPHML 911
Query: 408 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEV---VNAGGERKRLLNIAMQ 464
RRLK D + +PPK E ++ V ++ +Q +YY+A+L K+ ++ + G ++ +LNI MQ
Sbjct: 912 RRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 971
Query: 465 LRKCCNHPYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTR 522
LRK CNHPYL G EP G D I + K+ LL +L L + RVLIFSQMT+
Sbjct: 972 LRKVCNHPYLIPGTEPESGSLEFLHDMRIKASAKLTLLHSMLKVLHKEGHRVLIFSQMTK 1031
Query: 523 LLDILEDYLM--FRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINL 580
LLDILEDYL F + R+DG+ DR A+I FN+ +FVFLLSTRA GLGINL
Sbjct: 1032 LLDILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQ-DKNRFVFLLSTRACGLGINL 1090
Query: 581 ATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALD 640
ATAD VI+YDSD+NP D+QA +RAHRIGQ K + V+R ++EE++++ A KKL LD
Sbjct: 1091 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD 1150
Query: 641 ALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSS------KDSTITDEDIDRII---AKG 691
L + K+ ++ E ++R+G E +F+ KD+ ++ ++D I+ +K
Sbjct: 1151 QLFV-------NKSGSQKEFEDILRWGTEELFNDSAGENKKDTAESNGNLDVIMDLESKS 1203
Query: 692 EEATAEL-DAKMKKFTEDAIKFKMDDTA 718
+ L D K TE K DD A
Sbjct: 1204 RKKGGGLGDVYQDKCTEGNGKIVWDDIA 1231
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/525 (39%), Positives = 315/525 (60%), Gaps = 47/525 (8%)
Query: 188 TQPAC----IQGKMRDYQLAGLNWLIRLYENGINGIL-ADEMGLGKTLQTISLLGYLHEF 242
T P C + ++ +Q+ G++WLI+ Y G+N +L D+MGLGKTLQ IS L YL
Sbjct: 38 TPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFR 97
Query: 243 KGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAGK------ 296
+G+ GP +V+ P S W++EI RF P L ++++G+ R +R+ + K
Sbjct: 98 QGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGH 157
Query: 297 ---FDVCVTSFEMAIKEK--TASIK-RNIIIDEAHRIKNENSLLSKTM-RLYSTNYRLLI 349
FDV +T++++A+ ++ + I + IIDEA R+KN NS+L + + RLLI
Sbjct: 158 FLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLI 217
Query: 350 TGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGE-------NDQQEVVQQLHKVL 402
TGTP+QNNL ELW+L++F +P +F + + F F+ +G+ ++ +E + L +L
Sbjct: 218 TGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLSGLDVSNDKETYKSLKFIL 277
Query: 403 RPFLLRRLKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDL----EVVNAGGE 454
F+LRR KS +E G LPP E + V + +QK+ Y ++L+K+L E+ + G
Sbjct: 278 GAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSN 337
Query: 455 RKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRV 514
L NI +QLRK C+HPYLF G EP P+ G+HL+ +GK+++LD+LL +L + RV
Sbjct: 338 HTSLQNIVIQLRKACSHPYLFPGIEP-EPFEEGEHLVQASGKLLVLDQLLKRLHDSGHRV 396
Query: 515 LIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKP----------GSEK 564
L+FSQMT LDIL+D++ R Y Y R+DG+ ++R A+I F+ GS
Sbjct: 397 LLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNA 456
Query: 565 FVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYT 624
FVF++STRAGG+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE++
Sbjct: 457 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHS 516
Query: 625 IEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAE 669
+EE ++ RA +KL L V+ G E+K + +L +V FG +
Sbjct: 517 VEEVILRRAERKLQLSHNVV--GDNMEEKEEDGGDLRSLV-FGLQ 558
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 357 bits (915), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 204/473 (43%), Positives = 291/473 (61%), Gaps = 42/473 (8%)
Query: 181 SANTRLVTQPACIQ-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYL 239
+ N +V QP+ +Q G +RDYQL GL W++ LY N +NGILADEMGLGKT+Q ++L+ YL
Sbjct: 964 AVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL 1023
Query: 240 HEFKGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAGKFDV 299
EFKG GPH+++ P + L NW +E+ + P + + ++G D+R + + A KF+V
Sbjct: 1024 MEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCAMKFNV 1083
Query: 300 CVTSFEMAIKEKTASIK---RNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQN 356
VT++E + +++ K + IIIDEA R+K+ S+L++ + Y RLL+TGTPLQN
Sbjct: 1084 LVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQN 1143
Query: 357 NLHELWSLLNFLLPEIFSSAETFDEWF----QISG-----ENDQQE------VVQQLHKV 401
+L ELWSLLN LLP++F + + F +WF Q G E+D E V+ +LH++
Sbjct: 1144 DLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQI 1203
Query: 402 LRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGERKR---- 457
L PF+LRR DVE LP K +L+ MS +Q Y + V+ E+ R
Sbjct: 1204 LEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKN 1263
Query: 458 ----------LLNIAMQLRKCCNHPYLFQGAEPGPPYT---TGDHLITNAGKMVLLDKLL 504
L N M+LRK CNHP L PY + D L+ + GK+ +LD++L
Sbjct: 1264 PIYQAKIYRTLNNRCMELRKACNHPLLNY------PYFNDFSKDFLVRSCGKLWILDRIL 1317
Query: 505 PKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEK 564
KL+ RVL+FS MT+LLDILE+YL +R +Y RIDG T +DR+++I FN P ++
Sbjct: 1318 IKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDC 1377
Query: 565 FVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 617
F+FLLS RA G G+NL TAD V++YD D NP+ + QA RAHRIGQ +EV+V
Sbjct: 1378 FIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVI 1430
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 351 bits (900), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 203/473 (42%), Positives = 290/473 (61%), Gaps = 43/473 (9%)
Query: 181 SANTRLVTQPACIQ-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYL 239
+ N +V QP+ +Q G +RDYQL GL W++ LY N +NGILADEMGLGKT+Q ++L+ YL
Sbjct: 964 AVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL 1023
Query: 240 HEFKGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAGKFDV 299
EFKG GPH+++ P + L NW +E+ + P + + ++G D+R + + KF+V
Sbjct: 1024 MEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQVKFE-KFNV 1082
Query: 300 CVTSFEMAIKEKTASIK---RNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQN 356
VT++E + +++ K + IIIDEA R+K+ S+L++ + Y RLL+TGTPLQN
Sbjct: 1083 LVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQN 1142
Query: 357 NLHELWSLLNFLLPEIFSSAETFDEWF----QISG-----ENDQQE------VVQQLHKV 401
+L ELWSLLN LLP++F + + F +WF Q G E+D E V+ +LH++
Sbjct: 1143 DLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQI 1202
Query: 402 LRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGERKR---- 457
L PF+LRR DVE LP K +L+ MS +Q Y + V+ E+ R
Sbjct: 1203 LEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKN 1262
Query: 458 ----------LLNIAMQLRKCCNHPYLFQGAEPGPPYT---TGDHLITNAGKMVLLDKLL 504
L N M+LRK CNHP L PY + D L+ + GK+ +LD++L
Sbjct: 1263 PIYQAKIYRTLNNRCMELRKACNHPLLNY------PYFNDFSKDFLVRSCGKLWILDRIL 1316
Query: 505 PKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEK 564
KL+ RVL+FS MT+LLDILE+YL +R +Y RIDG T +DR+++I FN P ++
Sbjct: 1317 IKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDC 1376
Query: 565 FVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 617
F+FLLS RA G G+NL TAD V++YD D NP+ + QA RAHRIGQ +EV+V
Sbjct: 1377 FIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVI 1429
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 308 bits (790), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 209/558 (37%), Positives = 291/558 (52%), Gaps = 96/558 (17%)
Query: 181 SANTRLVTQ----PAC------IQGKMRDYQLAGLNWLIRLYENGING-ILADEMGLGKT 229
++ R+VTQ AC Q ++ YQL G+N+L+ LY+ GI G ILADEMGLGKT
Sbjct: 187 TSTVRIVTQNDIDDACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKT 246
Query: 230 LQTISLLGYLHEFKGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIRE 289
+Q I+ L L GPH+VV P S L NW E+R++CP +++ G + RE
Sbjct: 247 IQAITYLTLLSRLNNDPGPHLVVCPASVLENWERELRKWCPSFTVLQYHGAA-RAAYSRE 305
Query: 290 --DLLVAGK---FD---VCVTSFEMAI---KEKTASIKR----NIIIDEAHRIKNENSLL 334
L AGK F+ VC + FE K+ +KR +++DEAH +K++NS
Sbjct: 306 LNSLSKAGKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYR 365
Query: 335 SKTMRLYS--TNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQ 392
K + + N RL++TGTPLQN+LHELWSLL F+LP+IF++ E D ++ E+
Sbjct: 366 WKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTT-ENVDLKKLLNAED--T 422
Query: 393 EVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQ--------- 443
E++ ++ +L PF+LRRLKSDV + L PK + + V M + Q+ YK ++
Sbjct: 423 ELITRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQAR 482
Query: 444 ------KDLEVVNAGGERKRLLNIAMQLRKCCNHP------------------------- 472
K L + ++++ N Q RK NHP
Sbjct: 483 LVKLSSKSLNSLAKALPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAF 542
Query: 473 -----------------------YLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKE 509
LFQ T D + + K L +LLP +K+
Sbjct: 543 GFECSLDRVIEEVKGFNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKK 602
Query: 510 RDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLL 569
RVLIFSQ T +LDILE L G Y R+DG+T DR +D FN S F LL
Sbjct: 603 SGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKS-IFACLL 661
Query: 570 STRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKV 629
STRAGG G+NL AD VI++D D+NPQ+D QA+DR HRIGQ K V +FR T+ T++E +
Sbjct: 662 STRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENI 721
Query: 630 IERAYKKLALDALVIQQG 647
E A +KL LDA V++ G
Sbjct: 722 YEIAKRKLVLDAAVLESG 739
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 262 bits (669), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 254/498 (51%), Gaps = 59/498 (11%)
Query: 190 PACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKGPH 249
P CI K+ DYQ G+ WL L+ GI+ DEMGLGKT+Q +S LG LH F + P
Sbjct: 378 PECIFRKLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLH-FSKMYKPS 436
Query: 250 MVVAPKSTLGNWMNEIRRFCPILRAVKFLGN----------------------------- 280
+++ P + L W E +++ P V+ L +
Sbjct: 437 IIICPVTLLRQWRREAQKWYPDFH-VEILHDSAQDSGHGKGQGKASESDYDSESSVDSDH 495
Query: 281 -PDERRHIREDLLVA----GKFDVCVTSFEMA--IKEKTASIKRN-IIIDEAHRIKNENS 332
P + + D L+ + + +T++E EK +I+ ++DE HRI+N NS
Sbjct: 496 EPKSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNS 555
Query: 333 LLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQI------- 385
++ + T +R+++TG P+QN L ELWSL +F+ P F+ F +
Sbjct: 556 DITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGY 615
Query: 386 -SGENDQQEVVQQLHKVLR----PFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKA 440
+ Q + VLR P+LLRR+K+DV L K E +L ++ Q+ Y+A
Sbjct: 616 ANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRA 675
Query: 441 LLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQ--GAEPGPPYTTGDHLITNAGKMV 498
L G R L I + +RK CNHP L + + P Y + +GKM
Sbjct: 676 FLASSEVEQIFDGNRNSLYGIDV-MRKICNHPDLLEREHSHQNPDYGNPER----SGKMK 730
Query: 499 LLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFN 558
++ ++L K++ RVL+FSQ ++LDILE +L+ Y Y R+DG T R A ID FN
Sbjct: 731 VVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFN 790
Query: 559 KPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFR 618
+ FVF+L+T+ GGLG NL A+ VI++D DWNP D+QA++RA RIGQKK+V V+R
Sbjct: 791 N-SEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYR 849
Query: 619 FCTEYTIEEKVIERAYKK 636
T TIEEKV R K
Sbjct: 850 LITRGTIEEKVYHRQIYK 867
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 259 bits (663), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 129/300 (43%), Positives = 192/300 (64%), Gaps = 13/300 (4%)
Query: 190 PACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKGPH 249
P ++ +R+YQ GL+WL+ +YE +NGILADEMGLGKT+ TI+LL +L KGI GPH
Sbjct: 529 PFLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPH 588
Query: 250 MVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAGKFDVCVTSFEMAIK 309
++V P S + NW E ++CP + + + G+ ER+ R+ + F VC+T++ + I+
Sbjct: 589 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQ 648
Query: 310 EKTASIKRN----IIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLL 365
+ + KR +I+DEAH IKN S +T+ +++ R+L+TGTPLQN+L ELWSL+
Sbjct: 649 D-SKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLM 707
Query: 366 NFLLPEIFSSAETFDEWF--QISG-----ENDQQEVVQQLHKVLRPFLLRRLKSDVEKGL 418
+FL+P +F S + F +WF I+G E +EV+ +LH VLRPFLLRRLK DVEK L
Sbjct: 708 HFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQL 767
Query: 419 PPKKETILKVGMSQMQKQYYKALL-QKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQG 477
P K E ++ +S+ Q+ Y+ + + + G +++I MQLRK CNHP LF+G
Sbjct: 768 PSKHEHVIFCRLSKRQRNLYEDFIASTETQATLTSGSFFGMISIIMQLRKVCNHPDLFEG 827
Score = 166 bits (420), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 133/217 (61%), Gaps = 7/217 (3%)
Query: 493 NAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDA 552
+ GK+ L LL KLK R LIF+QMT++LD+LE ++ GY Y R+DG+T ++R
Sbjct: 1073 DCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQT 1132
Query: 553 SIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 612
+ FN + F+F+LSTR+GG+GINL AD VI YDSDWNP +D QAQDR HRIGQ +
Sbjct: 1133 LMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTR 1191
Query: 613 EVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVF 672
EV ++R +E TIEE ++++A +K LD LVIQ G E T +L M F
Sbjct: 1192 EVHIYRLISESTIEENILKKANQKRVLDNLVIQNG---EYNTEFFKKLDPMELFSGHKAL 1248
Query: 673 SSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDA 709
++KD T + I + A+++A +K+ ++A
Sbjct: 1249 TTKDEKETSKHCGADIPL---SNADVEAALKQAEDEA 1282
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 243 bits (620), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 259/515 (50%), Gaps = 70/515 (13%)
Query: 188 TQPACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKG 247
T P I + +Q GLNWL L+ G GIL D+MGLGKT+Q S L L K IK
Sbjct: 368 TLPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKR 427
Query: 248 PHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAGKFDVCVTSFEMA 307
+VVAPK+ L +WM E+ ++ G + R ++ GK + +T++++
Sbjct: 428 A-LVVAPKTLLPHWMKELATVGLSQMTREYYGTSTKAREYDLHHILQGK-GILLTTYDI- 484
Query: 308 IKEKTASIKRN----------------IIIDEAHRIKNENSLLSKTMRLYSTNYRLLITG 351
++ T +++ + +I+DE H IKN N+ +K++ +++R++I+G
Sbjct: 485 VRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISG 544
Query: 352 TPLQNNLHELWSLLNFLLPEIFSSAETFD---EWFQISGEN----DQQE-----VVQQLH 399
TP+QNNL ELW+L NF P + F E + + G + D+++ V + L
Sbjct: 545 TPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGSTVAKNLR 604
Query: 400 KVLRPFLLRRLKSDV------EKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGG 453
+ ++PF LRRLKS+V L K E ++ + ++ Q+Q Y+A L ++ + G
Sbjct: 605 EHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFLNSEIVLSAFDG 664
Query: 454 ERKRLLNIAMQLRKCCNHPYL---------FQGA-------EPGPPYTTGDHLITN---- 493
L I L+K C+HP L +G E G H+ N
Sbjct: 665 SPLAALTI---LKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAERLAMHIADNVDTD 721
Query: 494 ---------AGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGN 544
+ K+ + LL L RVLIFSQ ++L++++D L GY + RIDG
Sbjct: 722 DFQTKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGT 781
Query: 545 TGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR 604
T DR +++ F + G +FLL+++ GGLG+ L AD VI+ D WNP D Q+ DR
Sbjct: 782 TKAPDRLKTVEEFQE-GHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDR 840
Query: 605 AHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLAL 639
A+RIGQ K+V V+R T T+EEK+ + K L
Sbjct: 841 AYRIGQTKDVIVYRLMTSATVEEKIYRKQVYKGGL 875
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 239 bits (610), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 127/321 (39%), Positives = 196/321 (61%), Gaps = 26/321 (8%)
Query: 184 TRLVTQPACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFK 243
T V P +G +++YQ+ GL WL+ YE G+NGILADEMGLGKT+Q ++ L +L E K
Sbjct: 573 TSTVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEK 632
Query: 244 GIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLV-------AGK 296
I GP +VVAP S L NW +EI RFCP L+ + + G ER +R+++ AG
Sbjct: 633 NIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAG- 691
Query: 297 FDVCVTSFEMAIKEKTASIK---RNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTP 353
F + +TS+++ + ++ + + +++DEA IK+ +S+ KT+ ++ RLL+TGTP
Sbjct: 692 FHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTP 751
Query: 354 LQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEND-------QQEVVQQLHKVLRPFL 406
+QNN+ ELW+LL+F++P +F + + F+EWF EN + + +LH +L+PF+
Sbjct: 752 IQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFM 811
Query: 407 LRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQK----DLEVVNAG--GERK--RL 458
LRR+K DV L K E + +S Q+ +Y+A+ K +L N G ++K L
Sbjct: 812 LRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNL 871
Query: 459 LNIAMQLRKCCNHPYLFQGAE 479
+NI +QLRK CNHP LF+ E
Sbjct: 872 MNIVIQLRKVCNHPELFERNE 892
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 482 PPYTTGD--HLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYC 539
PP + D L+T++GK+ LD LL +L+ + RVL+F+QMT++L+ILEDY+ +R Y Y
Sbjct: 1191 PPMQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYL 1250
Query: 540 RIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDL 599
R+DG++ DR + F S+ FVFLLSTRAGGLGINL AD VI Y+SDWNP +DL
Sbjct: 1251 RLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1309
Query: 600 QAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRL 649
QA DRAHR+GQ K+V V+R + T+EEK++ RA +K + LV+ G +
Sbjct: 1310 QAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTGGHV 1359
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 228 bits (582), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 197/354 (55%), Gaps = 59/354 (16%)
Query: 184 TRLVTQPACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFK 243
T V P +G +++YQ+ GL WL+ YE G+NGILADEMGLGKT+Q ++ L +L E K
Sbjct: 573 TSTVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEK 632
Query: 244 GIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDL------------ 291
I GP +VVAP S L NW +EI RFCP L+ + + G ER +R+++
Sbjct: 633 NIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRVMFFSTWI 692
Query: 292 ----------------------------LVAGKFDVCVTSFEMAIKEKTASIK---RNII 320
+ AG F + +TS+++ + ++ + + ++
Sbjct: 693 ISFDPWAVRQICICKRACNVVRFQTLSDMDAG-FHILITSYQLLVTDEKYFRRVKWQYMV 751
Query: 321 IDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFD 380
+DEA IK+ +S+ KT+ ++ RLL+TGTP+QNN+ ELW+LL+F++P +F + + F+
Sbjct: 752 LDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFN 811
Query: 381 EWFQISGEND-------QQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQM 433
EWF EN + + +LH +L+PF+LRR+K DV L K E + +S
Sbjct: 812 EWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSR 871
Query: 434 QKQYYKALLQK----DLEVVNAG--GERK--RLLNIAMQLRKCCNHPYLFQGAE 479
Q+ +Y+A+ K +L N G ++K L+NI +QLRK CNHP LF+ E
Sbjct: 872 QQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFERNE 925
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 482 PPYTTGD--HLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYC 539
PP + D L+T++GK+ LD LL +L+ + RVL+F+QMT++L+ILEDY+ +R Y Y
Sbjct: 1224 PPMQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYL 1283
Query: 540 RIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDL 599
R+DG++ DR + F S+ FVFLLSTRAGGLGINL AD VI Y+SDWNP +DL
Sbjct: 1284 RLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1342
Query: 600 QAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRL 649
QA DRAHR+GQ K+V V+R + T+EEK++ RA +K + LV+ G +
Sbjct: 1343 QAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTGGHV 1392
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 173/574 (30%), Positives = 270/574 (47%), Gaps = 76/574 (13%)
Query: 196 KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGY-LHEFKGIKG-----PH 249
++R YQ G+NWL L ++GIL D+MGLGKTLQ +++ E +G P
Sbjct: 1481 QLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPS 1540
Query: 250 MVVAPKSTLGNWMNEIRRFC--PILRAVKFLGNPDERRHIREDLLVAGKFDVCVTSFEMA 307
++V P + +G+W EI ++ +L ++++G+ +R +RE +V +TS+++
Sbjct: 1541 IIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQF---NNHNVIITSYDVV 1597
Query: 308 IKEK---TASIKRNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSL 364
K+ T I+DE H IKN S ++ ++ +RL+++GTP+QNN+ ELWSL
Sbjct: 1598 RKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSL 1657
Query: 365 LNFLLPEIFSSAETFDEWF----------QISGENDQQEVV--QQLHKVLRPFLLRRLKS 412
+FL+P + F + + S ++ + V+ + LHK + PFLLRR K
Sbjct: 1658 FDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKE 1717
Query: 413 DVEKGLPPKKETILKVGMSQMQKQYYKALL-----QKDLEVVNAGGE------------- 454
+V LP K +S +Q + Y+ Q+ ++ G
Sbjct: 1718 EVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKA 1777
Query: 455 RKRLLNIAMQLRKCCNHPYLFQGAEPGPPYT--------------TGDHLITNAGKMVLL 500
+ L K C+HP L G + P T H + ++ K+V L
Sbjct: 1778 STHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVAL 1837
Query: 501 DKLLPK-------------LKERDSRVLIFSQMTRLLDILEDYLM---FRGYLYCRIDGN 544
++L + L RVLIF+Q LLDI+E L + Y R+DG+
Sbjct: 1838 QEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGS 1897
Query: 545 TGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR 604
+ R + AFN + V LL+T GGLG+NL +AD ++ + DWNP D QA DR
Sbjct: 1898 VVPEKRFEIVKAFNSDPTID-VLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDR 1956
Query: 605 AHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMV 664
AHR+GQK+ V V R T+EEKV+ K+++ VI A KT+N D+LL +
Sbjct: 1957 AHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAEN-ASMKTMNTDQLLDLF 2015
Query: 665 RFGAEMVFSSKDSTITDEDIDRIIAKGEEATAEL 698
S ED D+I G+ A L
Sbjct: 2016 ASAETSKKGGGSSKKGSEDNDQIAGTGKGMKAIL 2049
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 227 bits (578), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 173/574 (30%), Positives = 270/574 (47%), Gaps = 76/574 (13%)
Query: 196 KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGY-LHEFKGIKG-----PH 249
++R YQ G+NWL L ++GIL D+MGLGKTLQ +++ E +G P
Sbjct: 1450 QLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPS 1509
Query: 250 MVVAPKSTLGNWMNEIRRFC--PILRAVKFLGNPDERRHIREDLLVAGKFDVCVTSFEMA 307
++V P + +G+W EI ++ +L ++++G+ +R +RE +V +TS+++
Sbjct: 1510 IIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQF---NNHNVIITSYDVV 1566
Query: 308 IKEK---TASIKRNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSL 364
K+ T I+DE H IKN S ++ ++ +RL+++GTP+QNN+ ELWSL
Sbjct: 1567 RKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSL 1626
Query: 365 LNFLLPEIFSSAETFDEWF----------QISGENDQQEVV--QQLHKVLRPFLLRRLKS 412
+FL+P + F + + S ++ + V+ + LHK + PFLLRR K
Sbjct: 1627 FDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKE 1686
Query: 413 DVEKGLPPKKETILKVGMSQMQKQYYKALL-----QKDLEVVNAGGE------------- 454
+V LP K +S +Q + Y+ Q+ ++ G
Sbjct: 1687 EVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKA 1746
Query: 455 RKRLLNIAMQLRKCCNHPYLFQGAEPGPPYT--------------TGDHLITNAGKMVLL 500
+ L K C+HP L G + P T H + ++ K+V L
Sbjct: 1747 STHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVAL 1806
Query: 501 DKLLPK-------------LKERDSRVLIFSQMTRLLDILEDYLM---FRGYLYCRIDGN 544
++L + L RVLIF+Q LLDI+E L + Y R+DG+
Sbjct: 1807 QEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGS 1866
Query: 545 TGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR 604
+ R + AFN + V LL+T GGLG+NL +AD ++ + DWNP D QA DR
Sbjct: 1867 VVPEKRFEIVKAFNSDPTID-VLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDR 1925
Query: 605 AHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMV 664
AHR+GQK+ V V R T+EEKV+ K+++ VI A KT+N D+LL +
Sbjct: 1926 AHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAEN-ASMKTMNTDQLLDLF 1984
Query: 665 RFGAEMVFSSKDSTITDEDIDRIIAKGEEATAEL 698
S ED D+I G+ A L
Sbjct: 1985 ASAETSKKGGGSSKKGSEDNDQIAGTGKGMKAIL 2018
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 219 bits (557), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 254/526 (48%), Gaps = 67/526 (12%)
Query: 179 DGSANTRLVTQPACIQGKMRDYQLAGLNWLIRLYEN-----GING-ILADEMGLGKTLQT 232
DG +N + + + +R +Q G+ ++ ING ILAD+MGLGKTLQ+
Sbjct: 162 DGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQS 221
Query: 233 ISLLGYLHEFKGIKGPHMV-----VAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHI 287
I+LL Y +G G MV V P S + NW EI+++ + ++ + +
Sbjct: 222 ITLL-YTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKW--VGDRIQLIALCES---T 275
Query: 288 REDLLVA--------GKFDVCVTSFEMAIKEKTASIKRN----IIIDEAHRIKNENSLLS 335
R+D+L V + S+E + + +I DEAHR+KN+ +L +
Sbjct: 276 RDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTN 335
Query: 336 KTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQ---ISG----- 387
+ + + R+L++GTP+QN+L E ++++NF P A F +++ I G
Sbjct: 336 RALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTA 395
Query: 388 ----ENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQ 443
+N + +L + F+LRR + + LPPK ++ M+ +Q Y L
Sbjct: 396 TEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQTTYNGCLCM 455
Query: 444 KDLEVVNAGGERKRLLNIAMQLRKCCNHPYLF----QGAEPGP----------------- 482
+ + ++ ++L L+K CNHP L + PG
Sbjct: 456 QLKRALADNAKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSG 515
Query: 483 ---PYTTGD-HLITNAGKMVLLDKLLPKLKER-DSRVLIFSQMTRLLDILEDYLMFRGYL 537
+T GD + +GKM +L +LL L+ + D R+++ S T+ LD+ R Y
Sbjct: 516 RSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYP 575
Query: 538 YCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQV 597
+ R+DG+T R ++ N P ++F FLLS++AGG G+NL A+ ++L+D DWNP
Sbjct: 576 FLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPAN 635
Query: 598 DLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALV 643
D QA R R GQKK V V+RF + TIEEKV +R K L ++
Sbjct: 636 DKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 681
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 216 bits (550), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 158/528 (29%), Positives = 257/528 (48%), Gaps = 69/528 (13%)
Query: 179 DGSANTRLVTQPACIQGKMRDYQLAGLNWLIRLYEN-----GING-ILADEMGLGKTLQT 232
DG +N + + + +R +Q G+ ++ ING ILAD+MGLGKTLQ+
Sbjct: 162 DGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQS 221
Query: 233 ISLLGYLHEFKGIKGPHMV-----VAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHI 287
I+LL Y +G G MV V P S + NW EI+++ + ++ + +
Sbjct: 222 ITLL-YTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKW--VGDRIQLIALCES---T 275
Query: 288 REDLLVA--------GKFDVCVTSFEMAIKEKTASIKRN----IIIDEAHRIKNENSLLS 335
R+D+L V + S+E + + +I DEAHR+KN+ +L +
Sbjct: 276 RDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTN 335
Query: 336 KTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQ---ISG----- 387
+ + + R+L++GTP+QN+L E ++++NF P A F +++ I G
Sbjct: 336 RALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTA 395
Query: 388 ----ENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQ 443
+N + +L + F+LRR + + LPPK ++ M+ +Q Y +
Sbjct: 396 TEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFIS 455
Query: 444 -KDLEVVNA-GGERKRLLNIAMQLRKCCNHPYLF----QGAEPGP--------------- 482
K+L+ A ++ ++L L+K CNHP L + PG
Sbjct: 456 SKNLKRALADNAKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMF 515
Query: 483 -----PYTTGD-HLITNAGKMVLLDKLLPKLKER-DSRVLIFSQMTRLLDILEDYLMFRG 535
+T GD + +GKM +L +LL L+ + D R+++ S T+ LD+ R
Sbjct: 516 SGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERR 575
Query: 536 YLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNP 595
Y + R+DG+T R ++ N P ++F FLLS++AGG G+NL A+ ++L+D DWNP
Sbjct: 576 YPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNP 635
Query: 596 QVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALV 643
D QA R R GQKK V V+RF + TIEEKV +R K L ++
Sbjct: 636 ANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 683
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 169 bits (428), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 167/594 (28%), Positives = 268/594 (45%), Gaps = 119/594 (20%)
Query: 187 VTQPACIQGKMRDYQLAGLNWL----------IRLYENGINGILADEMGLGKTLQTISLL 236
V P I K++ +Q+ G+ ++ ++ + G+ ILA MGLGKT Q I+ L
Sbjct: 709 VRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFL 768
Query: 237 GYLHEFK--GIKGPHMVVAPKSTLGNWMNEIRRFCPI-LRAVKFLGNPDERRHIREDLLV 293
G+K ++V P + L NW +E ++ P ++ ++ D R R DLL
Sbjct: 769 YTAMRCVDLGLKTA-LIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLT 827
Query: 294 -----AGKFDVCVTSF---EMAIKEKTASIKRNI-----------IIDEAHRIKNENSLL 334
G F + T+F + K + R I + DEAH IKN +
Sbjct: 828 KWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADT 887
Query: 335 SKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQ-- 392
++ ++ R+ +TG+PLQNNL E + +++F+ S+ F FQ EN Q
Sbjct: 888 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMN 947
Query: 393 ------EVVQQ----LHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALL 442
+++ Q L++ L+ F+ R + V+K LPPK ++ V +S +Q+ Y+ L
Sbjct: 948 STAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFL 1007
Query: 443 QKDLEVVNAGGE----RKRLLNIAMQLRKCCNHPYLFQ----GAEPG--------PPYTT 486
+ L + G RK L + NHP + Q ++ G P +
Sbjct: 1008 E--LYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCS 1065
Query: 487 GD-----HLITNAGKMVL------LDKLLPK------LKERDSRVLIFS-QMTRLLDIL- 527
D +++T + + +D L K L++ + +V FS +M LLDIL
Sbjct: 1066 SDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILS 1125
Query: 528 ------EDYLMF----------------------------RGYLYCRIDGNTGGDDRDAS 553
+ L+F +G + RIDG T +R
Sbjct: 1126 MSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKL 1185
Query: 554 IDAFNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 612
+D FN+P +++ L+STRAG LGINL A+ VI+ D WNP DLQA RA R GQKK
Sbjct: 1186 VDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKK 1245
Query: 613 EVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRF 666
V +R TIEEK+ +R K L A V+ + ++ +T++K+E+L + F
Sbjct: 1246 PVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEF 1297
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 169 bits (428), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 167/594 (28%), Positives = 268/594 (45%), Gaps = 119/594 (20%)
Query: 187 VTQPACIQGKMRDYQLAGLNWL----------IRLYENGINGILADEMGLGKTLQTISLL 236
V P I K++ +Q+ G+ ++ ++ + G+ ILA MGLGKT Q I+ L
Sbjct: 709 VRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFL 768
Query: 237 GYLHEFK--GIKGPHMVVAPKSTLGNWMNEIRRFCPI-LRAVKFLGNPDERRHIREDLLV 293
G+K ++V P + L NW +E ++ P ++ ++ D R R DLL
Sbjct: 769 YTAMRCVDLGLKTA-LIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLT 827
Query: 294 -----AGKFDVCVTSF---EMAIKEKTASIKRNI-----------IIDEAHRIKNENSLL 334
G F + T+F + K + R I + DEAH IKN +
Sbjct: 828 KWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADT 887
Query: 335 SKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQ-- 392
++ ++ R+ +TG+PLQNNL E + +++F+ S+ F FQ EN Q
Sbjct: 888 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMN 947
Query: 393 ------EVVQQ----LHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALL 442
+++ Q L++ L+ F+ R + V+K LPPK ++ V +S +Q+ Y+ L
Sbjct: 948 STAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFL 1007
Query: 443 QKDLEVVNAGGE----RKRLLNIAMQLRKCCNHPYLFQ----GAEPG--------PPYTT 486
+ L + G RK L + NHP + Q ++ G P +
Sbjct: 1008 E--LYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCS 1065
Query: 487 GD-----HLITNAGKMVL------LDKLLPK------LKERDSRVLIFS-QMTRLLDIL- 527
D +++T + + +D L K L++ + +V FS +M LLDIL
Sbjct: 1066 SDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILS 1125
Query: 528 ------EDYLMF----------------------------RGYLYCRIDGNTGGDDRDAS 553
+ L+F +G + RIDG T +R
Sbjct: 1126 MSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKL 1185
Query: 554 IDAFNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 612
+D FN+P +++ L+STRAG LGINL A+ VI+ D WNP DLQA RA R GQKK
Sbjct: 1186 VDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKK 1245
Query: 613 EVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRF 666
V +R TIEEK+ +R K L A V+ + ++ +T++K+E+L + F
Sbjct: 1246 PVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEF 1297
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 169 bits (428), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 167/594 (28%), Positives = 268/594 (45%), Gaps = 119/594 (20%)
Query: 187 VTQPACIQGKMRDYQLAGLNWL----------IRLYENGINGILADEMGLGKTLQTISLL 236
V P I K++ +Q+ G+ ++ ++ + G+ ILA MGLGKT Q I+ L
Sbjct: 709 VRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFL 768
Query: 237 GYLHEFK--GIKGPHMVVAPKSTLGNWMNEIRRFCPI-LRAVKFLGNPDERRHIREDLLV 293
G+K ++V P + L NW +E ++ P ++ ++ D R R DLL
Sbjct: 769 YTAMRCVDLGLKTA-LIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLT 827
Query: 294 -----AGKFDVCVTSF---EMAIKEKTASIKRNI-----------IIDEAHRIKNENSLL 334
G F + T+F + K + R I + DEAH IKN +
Sbjct: 828 KWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADT 887
Query: 335 SKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQ-- 392
++ ++ R+ +TG+PLQNNL E + +++F+ S+ F FQ EN Q
Sbjct: 888 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMN 947
Query: 393 ------EVVQQ----LHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALL 442
+++ Q L++ L+ F+ R + V+K LPPK ++ V +S +Q+ Y+ L
Sbjct: 948 STAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFL 1007
Query: 443 QKDLEVVNAGGE----RKRLLNIAMQLRKCCNHPYLFQ----GAEPG--------PPYTT 486
+ L + G RK L + NHP + Q ++ G P +
Sbjct: 1008 E--LYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCS 1065
Query: 487 GD-----HLITNAGKMVL------LDKLLPK------LKERDSRVLIFS-QMTRLLDIL- 527
D +++T + + +D L K L++ + +V FS +M LLDIL
Sbjct: 1066 SDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILS 1125
Query: 528 ------EDYLMF----------------------------RGYLYCRIDGNTGGDDRDAS 553
+ L+F +G + RIDG T +R
Sbjct: 1126 MSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKL 1185
Query: 554 IDAFNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 612
+D FN+P +++ L+STRAG LGINL A+ VI+ D WNP DLQA RA R GQKK
Sbjct: 1186 VDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKK 1245
Query: 613 EVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRF 666
V +R TIEEK+ +R K L A V+ + ++ +T++K+E+L + F
Sbjct: 1246 PVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEF 1297
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 163 bits (412), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 161/578 (27%), Positives = 261/578 (45%), Gaps = 108/578 (18%)
Query: 187 VTQPACIQGKMRDYQLAGLNWL----------IRLYENGINGILADEMGLGKTLQTISLL 236
V P I K++ +Q+ G+ ++ ++ + G+ ILA MGLGKT Q I+ L
Sbjct: 709 VRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFL 768
Query: 237 GYLHEFK--GIKGPHMVVAPKSTLGNWMNEIRRFCPI----LRAVKFLGNPDERRHIRED 290
G+K ++V P + L NW +E ++ P LR + LG+ + E
Sbjct: 769 YTAMRCVDLGLKTA-LIVTPVNVLHNWRSEFEKWMPSEVKPLR-IFMLGDVSRYKFFYER 826
Query: 291 LLVAGKFDVCVTSFEMAIKEKTASIKRNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLIT 350
K A+++ + + DEAH IKN + ++ ++ R+ +T
Sbjct: 827 NFWGVKDLNAARGICNALRDGPDIL----VCDEAHIIKNTKADTTQALKQVKCQRRIALT 882
Query: 351 GTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQ--------EVVQQ----L 398
G+PLQNNL E + +++F+ S+ F FQ EN Q +++ Q L
Sbjct: 883 GSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHIL 942
Query: 399 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGE---- 454
++ L+ F+ R + V+K LPPK ++ V +S +Q+ Y+ L+ L + G
Sbjct: 943 YEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLE--LYGFSDGRTDERM 1000
Query: 455 RKRLLNIAMQLRKCCNHPYLFQ----GAEPG--------PPYTTGD-----HLITNAGKM 497
RK L + NHP + Q ++ G P + D +++T +
Sbjct: 1001 RKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQR 1060
Query: 498 VL------LDKLLPK------LKERDSRVLIFS-QMTRLLDIL-------EDYLMF---- 533
+ +D L K L++ + +V FS +M LLDIL + L+F
Sbjct: 1061 TMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSI 1120
Query: 534 ------------------------RGYLYCRIDGNTGGDDRDASIDAFNKPGSEKF-VFL 568
+G + RIDG T +R +D FN+P +++ L
Sbjct: 1121 PTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTL 1180
Query: 569 LSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEK 628
+STRAG LGINL A+ VI+ D WNP DLQA RA R GQKK V +R TIEEK
Sbjct: 1181 ISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEK 1240
Query: 629 VIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRF 666
+ +R K L A V+ + ++ +T++K+E+L + F
Sbjct: 1241 IYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEF 1276
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 230/535 (42%), Gaps = 98/535 (18%)
Query: 189 QPACIQGKMRDYQLAGLNWLIRLYENGI-NGILADEMGLGKTLQTISLLGYLHEFKGIK- 246
QP + + YQ L W + + GILADEMG+GKT+Q ISL+ E K
Sbjct: 126 QPLDLIIPLLKYQKEFLAWATIQELSAVRGGILADEMGMGKTIQAISLVLARREVDRAKS 185
Query: 247 ----GPHMVVAPKSTLGNWMNEIRRFCP--ILRAVKFLGNPDERRHIREDLLVAGKFDVC 300
G +V+ P L W++EI R R +++ G P +++++ + +D
Sbjct: 186 REAVGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHG-PKRDKNVQKLM----NYDFV 240
Query: 301 VTSFEMAIKE------------KTASIKRN-IIIDEAHRIKNENSLLSKTMRLYSTNYRL 347
+T+ + E SIK N II+DEAH IKN +S +K + YR
Sbjct: 241 LTTSPIVENEYRKDEGVDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRW 300
Query: 348 LITGTPLQNNLHELWSLLNFLLPEIFSS--------------AETFDEWFQISGENDQQE 393
++GTPLQN++ EL+SL+++ F S A F I G
Sbjct: 301 ALSGTPLQNDVDELYSLVSYSFLNFFYSTYASFAFRHTHITFARNVTVKFLIGGNILPLS 360
Query: 394 VVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAG- 452
+ ++ V +++ + L K+ L V + + YK + AG
Sbjct: 361 IPVRIENVPAVLIMQ-----INTSLGGKRRDALSVVEADFYESLYKVSKTTFDGYIQAGT 415
Query: 453 --GERKRLLNIAMQLRKCCNHPYLFQ-----------------------GAEPGPPY--T 485
+ + ++LR+ +HPYL G +P Y T
Sbjct: 416 LMNNYAHIFGLLIRLRQAVDHPYLVSYSSPSGANANLLDANKNEKECGFGHDPSKDYFVT 475
Query: 486 TGDHLIT----------------------NAGKMVLLDKLLPKLKERD--SRVLIFSQMT 521
+ +H + + K+ L + + + ERD ++ ++FSQ T
Sbjct: 476 SSEHQASKTKLKGFRASSILNRINLDDFKTSTKIEALREEIRFMVERDWSAKAIVFSQFT 535
Query: 522 RLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLA 581
LD++ L G ++ G+ +DA++ F K + V L+S +AGG+ +NL
Sbjct: 536 SFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNF-KEEPDCRVLLMSLQAGGVALNLT 594
Query: 582 TADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKK 636
A V + D WNP V+ QAQDR HRIGQ K V+V RF E T+EEK++ KK
Sbjct: 595 AASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQKKK 649
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
Query: 491 ITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDR 550
+ + GKM L+KL+ + ++L+FS R+LDILE +L+ +GY + R+DG+T + R
Sbjct: 524 VKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLR 583
Query: 551 DASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQ 610
+ +D FN S++ VFL+ST+AGGLG+NL +A+ V+++D +WNP DLQAQDR+ R GQ
Sbjct: 584 QSLVDDFNASPSKQ-VFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQ 642
Query: 611 KKEVQVFRFCTEYTIEEKVIERAYKKLALDALVI 644
K+ V VFR + ++EE V R K L + +
Sbjct: 643 KRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAV 676
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 145/284 (51%), Gaps = 29/284 (10%)
Query: 186 LVTQPACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKG- 244
++ PA I ++ ++Q G+ ++ LY+N GIL D+MGLGKT+QTI+ L ++ G
Sbjct: 128 IIHVPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGD 187
Query: 245 ---------IKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAG 295
KGP +++ P S + NW +E R+ + + G+ R I E L G
Sbjct: 188 AGESCLLESDKGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGS--NRDMILEKLKARG 245
Query: 296 KFDVCVTSFE-MAIKEKTAS-IKRNIII-DEAHRIKNENSLLSKTMRLYSTNYRLLITGT 352
+V VTSF+ I+ S I I+I DEAHR+KNE S L + T R+ +TGT
Sbjct: 246 -VEVLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGT 304
Query: 353 PLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVV------------QQLHK 400
+QN + EL++L ++ P + E F +++ + Q+ Q L
Sbjct: 305 VMQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGS 364
Query: 401 VLRPFLLRRLKSDVEKGLPPKKE-TILKVGMSQMQKQYYKALLQ 443
+LR ++LRR K + L KE ++ MSQ+Q++ Y+ ++Q
Sbjct: 365 LLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQ 408
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 207/470 (44%), Gaps = 47/470 (10%)
Query: 190 PACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKGPH 249
P+ I+ K+ +Q G+ +++ ++G +LADEMGLGKTLQ I++ + E P
Sbjct: 165 PSHIEPKLLPFQREGIEFIL---QHGGRVLLADEMGLGKTLQAIAVTTCVQE----SWPV 217
Query: 250 MVVAPKSTLGNWMNEIRRF--CPILRAVKFLGNPDERR---------HIREDLLVAGKFD 298
+++AP S +W I ++ P V L P + + + + G F+
Sbjct: 218 LIIAPSSLRLHWATMIHQWLHVPPSDIVVVLPQPGGSNKCGFTIVSSNTKGTIHLDGVFN 277
Query: 299 VCVTSFEMAIKEKTASIKRNIII-DEAHRIKNENSLLSKTMR--LYSTNYRLLITGTPLQ 355
+ + + ++ ++I DE+H +KN + + + Y +L++GTP
Sbjct: 278 IVSYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKKAQYAILLSGTPAL 337
Query: 356 NNLHELWSLLNFLLPEIFSSAETFDEWF-------QISGENDQQEVVQQLHKVLRP-FLL 407
+ EL+ L L P+++ + + + G ++ E LH +++ ++
Sbjct: 338 SRPIELFKQLEALYPDVYRNIHEYGGRYCKGGFFGTYQGASNHDE----LHNLMKATVMI 393
Query: 408 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRK 467
RRLK DV LP K+ ++Q + L KD++ +NA ++ + +++
Sbjct: 394 RRLKKDVLTELPSKR-----------RQQVFLDLAAKDMKQINALFHELKV--VKSKIKD 440
Query: 468 CCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDIL 527
C + + + + K+ + L + E + L+F+ +L+ L
Sbjct: 441 CISEDDIKSLKFIEKNLINKIYTDSAVAKIPAVLDYLENVIEAGCKFLVFAHHQSMLEEL 500
Query: 528 EDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVI 587
+L + RIDG+T R A + F K +LS RA G+GI L A VI
Sbjct: 501 HQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDEIK-AAVLSIRAAGVGITLTAASTVI 559
Query: 588 LYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKL 637
+ W P +QA+DRAHRIGQ V + T+++ + + KL
Sbjct: 560 FAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKL 609
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 146/325 (44%), Gaps = 67/325 (20%)
Query: 217 NGILADEMGLGKTLQTISLL----------GYL------------------------HEF 242
GILAD MGLGKT+ TISLL G+L +F
Sbjct: 414 GGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKF 473
Query: 243 KGI------------KGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFL----GNPDERRH 286
G G +++V P + LG W EI ++ P + +
Sbjct: 474 LGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKL 533
Query: 287 IREDLLVAGKFDVCVTSFEM---AIKEKTASIKR-NIIIDEAHRIKNENSLLSKTMRLYS 342
+ + +V + V + F A E +++ I++DEAH IKN S +S
Sbjct: 534 LSQSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALV 593
Query: 343 TNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVL 402
+ R +TGTP+QNNL +L+SLL FL E + + +++ Q E + ++ + +L
Sbjct: 594 ADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSIL 653
Query: 403 RPFLLRRLKSDVEKG------LPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGERK 456
+P +LRR KS ++ LPP ++ +S+ ++ +Y AL ++ + E+
Sbjct: 654 KPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQG 713
Query: 457 RLLN-------IAMQLRKCCNHPYL 474
++L+ + ++LR+CC+HP+L
Sbjct: 714 KVLHNYASILELLLRLRQCCDHPFL 738
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 90/159 (56%), Gaps = 3/159 (1%)
Query: 494 AGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDAS 553
+ K+ L + L L+ S+ ++FSQ T LD+L+ L + + R+DG R+
Sbjct: 862 SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKV 921
Query: 554 IDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKE 613
+ F++ GS V L+S +AGG+GINL A + D WNP V+ QA R HRIGQ KE
Sbjct: 922 LKEFSEDGS-ILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKE 980
Query: 614 VQVFRFCTEYTIEEKV--IERAYKKLALDALVIQQGRLA 650
V++ RF + T+EE++ ++ +++ AL Q+ R A
Sbjct: 981 VKIRRFIVKGTVEERMEAVQARKQRMISGALTDQEVRSA 1019
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 134/547 (24%), Positives = 222/547 (40%), Gaps = 112/547 (20%)
Query: 201 QLAGLNWLIRLYENGING----ILADEMGLGKTLQTISLL-GYLHEFKGIKGPHMVVAPK 255
LAG + L G+ G I++ + G GKT T+ L YL F MV+AP
Sbjct: 591 NLAGTTKINELNSVGVKGSGGCIISHKAGTGKTRLTVVFLQSYLKRFPN--SHPMVIAPA 648
Query: 256 STLGNWMNEIRRF---CPI--LRAVKFLGNPD---------ERRH--IREDLLVAGKFDV 299
+ + W +E+R++ P + +++ G D R H IR LV+
Sbjct: 649 TLMRTWEDEVRKWNVNIPFYNMNSLQLSGYEDAEAVSRLEGNRHHNSIRMVKLVSWWKQK 708
Query: 300 CVTSFEMAIKEKTASIKRN----------------IIIDEAHRIKNENSLLSKTMRLYST 343
+ + EK A+ K +++DE H +N++SL+ K + T
Sbjct: 709 SILGISYPLYEKLAANKNTEGMQVFRRMLVELPGLLVLDEGHTPRNQSSLIWKVLTEVRT 768
Query: 344 NYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLR 403
R+ ++GT QNN EL ++L P D+ + ++H+
Sbjct: 769 EKRIFLSGTLFQNNFKELSNVLCLARPA------------------DKDTISSRIHE--- 807
Query: 404 PFLLRRLKSDVEKGLPPKKETI--LKVGMSQMQKQYYKALLQKDLE-------VVNAGGE 454
L + + E G ++ I LK ++ + +LQ+ L V+N +
Sbjct: 808 ---LSKCSQEGEHGRVNEENRIVDLKAMIAHFVHVHEGTILQESLPGLRDCVVVLNPPFQ 864
Query: 455 RKRLLN----------IAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLL 504
+K++L+ +L HP L+ P T + L+ + L +L
Sbjct: 865 QKKILDRIDTSQNTFEFEHKLSAVSVHPSLYLCCNP----TKKEDLVIGPATLGTLKRLR 920
Query: 505 PKLKER----------------DSRVLIFSQMTRLLDILEDYLM-----FRGYLYCRIDG 543
K +E +VL++SQ L ++ + L+ G + G
Sbjct: 921 LKYEEGVKTKFLIDFIRISGTVKEKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHG 980
Query: 544 NTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQD 603
DR ID FNKP S V L ST+A GI+L A V++ D WNP V+ QA
Sbjct: 981 KVEQRDRQHMIDNFNKPDSGSKVLLASTKACSEGISLVGASRVVILDVVWNPSVESQAIS 1040
Query: 604 RAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVI----QQGRLAEQKTVNKDE 659
RA RIGQK+ V ++ + T E + +K + LV ++ + + V+KD
Sbjct: 1041 RAFRIGQKRAVFIYHLMVKDTSEWNKYCKQSEKHRISELVFSSTNEKDKPINNEVVSKDR 1100
Query: 660 LL-QMVR 665
+L +MVR
Sbjct: 1101 ILDEMVR 1107
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 152/340 (44%), Gaps = 44/340 (12%)
Query: 319 IIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAET 378
+++DEAH +N+ S + KT+ T R+L++GTP QNN EL ++L P+ E
Sbjct: 1008 LVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYL---ER 1064
Query: 379 FDEWFQISG--------ENDQQEV----VQQLHKVLRPFLLRRLKSDVEKGLPPKKETIL 426
+ SG +N E+ +++L V+ PF+ S ++ LP +E ++
Sbjct: 1065 LTSTLKKSGMTVTKRGKKNLGNEINNRGIEELKAVMLPFVHVHKGSILQSSLPGLRECVV 1124
Query: 427 KVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTT 486
+ ++Q++ +++ V + K + +L HP L +
Sbjct: 1125 VLNPPELQRRVLESI------EVTHNRKTKNVFETEHKLSLVSVHPSLVSRCKISEKERL 1178
Query: 487 G-DHLITNAGKMVLLD--------------KLLPKLKERDSRVLIFSQMTRLLDILEDYL 531
D + K V LD +L +KE+ VL+FSQ L ++ +L
Sbjct: 1179 SIDEALLAQLKKVRLDPNQSVKTRFLMEFVELCEVIKEK---VLVFSQYIDPLKLIMKHL 1235
Query: 532 MFR-----GYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVV 586
+ R G + G R I+ FN P S+ VFL ST+A GI+L A V
Sbjct: 1236 VSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRV 1295
Query: 587 ILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIE 626
IL D WNP V+ QA RA+RIGQK+ V + + T E
Sbjct: 1296 ILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPE 1335
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 146/327 (44%), Gaps = 60/327 (18%)
Query: 218 GILADEMGLGKTLQTISLL------------------------------GYLHEFKGIKG 247
GILAD MGLGKT+ TI+L+ L K KG
Sbjct: 683 GILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKA-KG 741
Query: 248 PHMVVAPKSTLGNWMNEIRRFCP--ILRAVKFLGNPDERRHIREDLLVAGKFDVCVTSFE 305
+++ P + L W +E+ + + + G +R H D DV +T++
Sbjct: 742 GTLIICPMALLSQWKDELETHSKPDTVSVLVYYGG--DRTH---DAKAIASHDVVLTTYG 796
Query: 306 M---AIKEKTA-SIKRNI-----IIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQN 356
+ A K+ A SI I ++DEAH IK+ + +K S++ R +TGTPLQN
Sbjct: 797 VLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQN 856
Query: 357 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEK 416
L +L+SLL FL E + + + + Q EN ++ + +LRP +LRR K +K
Sbjct: 857 KLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRTKETRDK 916
Query: 417 ------GLPPKKETILKVGMSQMQKQYYKALLQKD---LEVVNAGGE----RKRLLNIAM 463
LPP +++ S+ ++ +Y AL ++ + A G+ +L + +
Sbjct: 917 EGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLL 976
Query: 464 QLRKCCNHPYLFQGAEPGPPYTTGDHL 490
+LR+CCNHP+L Y D L
Sbjct: 977 RLRQCCNHPFLVMSRADSQQYADLDSL 1003
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 3/138 (2%)
Query: 494 AGKMVLLDKLLPKLKERDS--RVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRD 551
+ K+ L K L K+K+ S + ++FSQ T LD+LE L RG+ + R DG R+
Sbjct: 1108 SSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGRE 1167
Query: 552 ASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQK 611
+ FN+ +K + L+S +AGG+G+NL A V L D WNP V+ QA R HRIGQK
Sbjct: 1168 KVLKEFNE-TKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQK 1226
Query: 612 KEVQVFRFCTEYTIEEKV 629
+ V V RF + T+EE++
Sbjct: 1227 RTVFVRRFIVKDTVEERM 1244
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Query: 499 LLDKLLPKLKER-DSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAF 557
LL L+ +E +++ ++FSQ ++L +LE L G+ R+DG R I F
Sbjct: 693 LLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEF 752
Query: 558 NKPG-SEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQV 616
P + V L S +A G GINL A V L+D WNP V+ QA DR HRIGQK+EV++
Sbjct: 753 GNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKM 812
Query: 617 FRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRF 666
R +IEE+V+E KK L ++ + +++ VN ++++ ++
Sbjct: 813 IRMIARNSIEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVVALMSL 862
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 37/283 (13%)
Query: 250 MVVAPKSTLGNWMNEIRRFC--PILRAVKFLGNPDERRHIREDLLVAGKFDVCVTSF-EM 306
++V P S + W+ ++ IL+ + G ER +L+ K+D+ +T++ +
Sbjct: 342 LIVCPPSVISAWITQLEEHTVPGILKVYMYHGG--ERTDDVNELM---KYDIVLTTYGTL 396
Query: 307 AIKE--KTASIKR----NIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHE 360
A++E + + +K+ II+DEAH IKN N+ S+ + + R +TGTP+QN +
Sbjct: 397 AVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFD 456
Query: 361 LWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPP 420
L+SL+ FL E FS + Q ++ + +L ++ LRR K GLPP
Sbjct: 457 LYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGLPP 516
Query: 421 KKETILKVGMSQMQKQYY-------KALLQKDLEVVNAGGERKR---LLNIAMQLRKCCN 470
K V +S ++Q Y K ++Q ++N G + +L+I ++LR+ C+
Sbjct: 517 KTVETCYVELSPEERQLYDHMEGEAKGVVQN---LINNGSLMRNYSTVLSIILRLRQLCD 573
Query: 471 HPYLFQGAEPGPP----YTTGDHLITNAGKMVLLDKLLPKLKE 509
L PP +TT + K LL KL+ L++
Sbjct: 574 DMSLC------PPELRSFTTSTSVEDVTDKPELLQKLVAALQD 610
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 507 LKERD--SRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEK 564
+ ERD ++ ++FSQ T LD++ L G ++ G+ RD +I+ F K +
Sbjct: 674 MVERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKF-KEDPDC 732
Query: 565 FVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYT 624
VFL+S +AGG+ +NL A V + D WNP V+ QAQDR HRIGQ K ++V RF E T
Sbjct: 733 RVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENT 792
Query: 625 IEEKVIERAYKK 636
+EE+++ KK
Sbjct: 793 VEERILRLQKKK 804
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 45/206 (21%)
Query: 314 SIKRN-IIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEI 372
S+K N II+DEAH IK S ++ + YR ++GTPLQN + EL+SL+ FL
Sbjct: 351 SVKWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLIRFLQIRP 410
Query: 373 FS--------------------------SAETFDEWFQISGEN---------DQQEVVQQ 397
+S + F W + + ++ ++
Sbjct: 411 YSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNKYVAKPITVYGSFGLGKRAMILL 470
Query: 398 LHKVLRPFLLRRLK--SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGER 455
HKVL+ LLRR K + LPP+ T+ + + + YY++L + N E
Sbjct: 471 KHKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKEFDYYESLYKNSQAEFNTYIEA 530
Query: 456 KRLLN-------IAMQLRKCCNHPYL 474
L+N + +LR+ +HPYL
Sbjct: 531 GTLMNNYAHIFDLLTRLRQAVDHPYL 556
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 200 YQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHE-----FKGIKGPHMVVAP 254
YQ L W + ++ GILADEMG+GKT+Q ISL+ E F G +V+ P
Sbjct: 142 YQKEFLAWATKQEQSVAGGILADEMGMGKTIQAISLVLARREVDRAQFGEAAGCTLVLCP 201
Query: 255 KSTLGNWMNEIRRF 268
+ W+NEI RF
Sbjct: 202 LVAVSQWLNEIARF 215
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 223/521 (42%), Gaps = 99/521 (19%)
Query: 196 KMRDYQLAGLNWLIR-LYENGING-ILADEMGLGKTLQTISLLGYLHEFKGIKGPHMVVA 253
+MR +Q G +L L + G ILA G GKT IS L P +VV
Sbjct: 264 EMRPHQTEGFRFLCNNLAADEPGGCILAHAPGSGKTFLLISFLQSFMAMDPQARP-LVVL 322
Query: 254 PKSTLGNWMNEIRRF----CPIL-----------RAVKFLGNPDERRHIREDLLVAGKFD 298
PK + +W E + P+L + +K LG + R I L +F
Sbjct: 323 PKGIIESWKREFTLWEVEKIPLLDFYSVKAESRKQQLKVLGQWIKERSIL--FLGYQQFT 380
Query: 299 --VCVTSFEMAIKEKTASIKRN---IIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTP 353
+C +FE A ++ + +I+DE H +N+ + + ++ T ++++TGT
Sbjct: 381 RIICDDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSLARVKTRRKVVLTGTL 440
Query: 354 LQNNLHELWSLLNFLLPE-------------IFSSAE----------------TFDEWFQ 384
QNN+ E++++L+ + P+ I S AE TF +
Sbjct: 441 FQNNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGTFFAAVE 500
Query: 385 ISGE-----NDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYK 439
++ + + + +++ L ++ R +L K+D LP E + + +S +Q+ K
Sbjct: 501 LTLQRSTNFSAKASLIKDLREMTRN-ILHYHKADFSGLLPGLSEFTVMLNLSSIQRDEVK 559
Query: 440 ALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVL 499
L + +L ++ L A+ + HP L E P + G+ ++ V+
Sbjct: 560 GLRKMELF-------KQISLGAALYI-----HPKLKSFLEENP--SNGEKGFSDNNTTVM 605
Query: 500 -LDKLLPKLKERDS------------------RVLIFSQMTRLLDILEDYLM-FRGYLYC 539
LDK+L K+ RD ++L+FSQ + LE + +G+
Sbjct: 606 KLDKMLKKINVRDGVKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLG 665
Query: 540 R----IDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNP 595
+ I G++ + R+ S++ FN K VF S +A G GI+L A V++ D NP
Sbjct: 666 KEMFTITGDSSNEQREWSMERFNNSLEAK-VFFGSIKACGEGISLVGASRVLILDVHLNP 724
Query: 596 QVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKK 636
V QA RA+R GQK++V ++ + EE+ E +K
Sbjct: 725 SVTQQAVARAYRPGQKRKVYAYKLVAADSPEEENYETCTRK 765
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 124/523 (23%), Positives = 212/523 (40%), Gaps = 103/523 (19%)
Query: 219 ILADEMGLGKTLQTISLL-GYLHEFKGIKGPHMVVAPKSTLGNWMNEI------------ 265
+++ G GKT I+ L YL F G K P +V+APK+TL W E
Sbjct: 714 VISHSPGAGKTFLIIAFLTSYLKLFPG-KRP-LVLAPKTTLYTWYKEFIKWEIPVPVHLI 771
Query: 266 ---RRFCPIL--RAVKFLGNPDERR---------------HIREDLLVAGKFDVCVTSFE 305
R +C + V+F G P R H +LV G TSF
Sbjct: 772 HGRRTYCTFKQNKTVQFNGVPKPSRDVMHVLDCLEKIQKWHAHPSVLVMG-----YTSFT 826
Query: 306 MAIKEKTASIKRN------------IIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTP 353
++E + R +++DE H ++ S L K + T+ R+L++GT
Sbjct: 827 TLMREDSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRILLSGTL 886
Query: 354 LQNNLHELWSLLNFLLPE-IFSSAETFDEWFQIS-GENDQQEVVQ-QLHKVLRPFLLRRL 410
QNN E ++ L P+ I D+ F+ + G N +++ + K+ + +++
Sbjct: 887 FQNNFCEYFNTLCLARPKFIHEVLMELDQKFKTNHGVNKAPHLLENRARKLFLDIIAKKI 946
Query: 411 KSDVE----KGLPPKKETILKVGMSQMQKQYY-------KAL--LQKDLEVVNAGGERKR 457
+ V +GL +LK + Y AL LQ V+N+ + +
Sbjct: 947 DASVGDERLQGL-----NMLKNMTNGFIDNYEGSGSGSGDALPGLQIYTLVMNSTDIQHK 1001
Query: 458 LLN---------------IAMQLRKCCNHPYLFQGAEPGPPYTTGD---------HLITN 493
+L + +Q+ HP+L + + H
Sbjct: 1002 ILTKLQDVIKTYFGYPLEVELQITLAAIHPWLVTSSNCCTKFFNPQELSEIGKLKHDAKK 1061
Query: 494 AGKMVLLDKLLPKLKERDSRVLIFSQ----MTRLLDILEDYLMF-RGYLYCRIDGNTGGD 548
K++ + L+ ++ +R+ ++LIF + ++ E+ + RG + G+
Sbjct: 1062 GSKVMFVLNLIFRVVKRE-KILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDLELF 1120
Query: 549 DRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRI 608
+R ID F +PG+ V L S A GI+L A VI+ DS+WNP QA RA R
Sbjct: 1121 ERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRP 1180
Query: 609 GQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAE 651
GQ+K V V++ + T+EE R K + ++ + +A+
Sbjct: 1181 GQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSCMIFSEEFVAD 1223
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Query: 513 RVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTR 572
+ ++F+Q T++LD+LE L G Y R DG RDA++ FN + V ++S +
Sbjct: 1116 KAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNT-LPDVSVMIMSLK 1174
Query: 573 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 632
A LG+N+ A VI+ D WNP + QA DRAHRIGQ + V+V RF + T+E++++
Sbjct: 1175 AASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILAL 1234
Query: 633 AYKK 636
KK
Sbjct: 1235 QQKK 1238
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 319 IIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAET 378
+++DEA IKN + S R ++GTP+QN++ +L+S FL + +SS +T
Sbjct: 760 VVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQT 819
Query: 379 FDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETILKVGMSQM 433
F E + + E + L +L+ +LRR K + G LPPK + +V ++
Sbjct: 820 FCETIKNPISSYPGEGYKTLQAILKKVMLRRTKDTLLDGKPVISLPPKSIELRRVDFTKE 879
Query: 434 QKQYYKALLQKDL----EVVNAGGERKRLLNI---AMQLRKCCNHP 472
++ +Y L E AG ++ +NI ++LR+ C HP
Sbjct: 880 ERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACGHP 925
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Query: 513 RVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTR 572
+ ++F+Q T++LD+LE L G Y R DG RDA++ FN + V ++S +
Sbjct: 1073 KAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNT-LPDVSVMIMSLK 1131
Query: 573 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 632
A LG+N+ A VI+ D WNP + QA DRAHRIGQ + V+V RF + T+E++++
Sbjct: 1132 AASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILAL 1191
Query: 633 AYKK 636
KK
Sbjct: 1192 QQKK 1195
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 144/340 (42%), Gaps = 69/340 (20%)
Query: 200 YQLAGLNWLIRLYENG---INGILADEMGLGKTLQTISLL------GYL----------- 239
+Q L+W+ + +G GILAD+ GLGKT+ TI+L+ YL
Sbjct: 545 HQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYLPCEEDSKNGGC 604
Query: 240 ----------HEFKGIK-----------GPHMVVAPKSTLGNWMNEIRRFCPILRAVKFL 278
+E K ++ ++V P S + W +E+R+ + + L
Sbjct: 605 NQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRKKVTLEAHLSVL 664
Query: 279 GNPDERRHIREDLLVAGKFDVCVTSFEMAIKEKTASIKR--------------NIIIDEA 324
R +D K+DV +T++ + K K + +++DEA
Sbjct: 665 VYHGCSR--TKDPHELAKYDVVITTYSLVSKRKHMDCEPVEFLSGPLAQVSWFRVVLDEA 722
Query: 325 HRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQ 384
IKN + S R ++GTP+QN++ +L+S FL + +SS +TF E +
Sbjct: 723 QSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFCETIK 782
Query: 385 ISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETILKVGMSQMQKQYYK 439
+ E + L +L+ +LRR K + G LPPK + +V ++ ++ +Y
Sbjct: 783 NPISSYPGEGYKTLQAILKKVMLRRTKDTLLDGKPVISLPPKSIELRRVDFTKEERDFYS 842
Query: 440 ALLQKDL----EVVNAGGERKRLLNI---AMQLRKCCNHP 472
L E AG ++ +NI ++LR+ C HP
Sbjct: 843 KLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACGHP 882
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
Query: 513 RVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTR 572
+ +IFSQ T +LD++E ++ G + R+DG RD ++ F+K K V L+S +
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVK-VMLMSLK 952
Query: 573 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 632
AG LG+N+ A VIL D WNP + QA DRAHRIGQ + V V R + T+E+++++
Sbjct: 953 AGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKL 1012
Query: 633 AYKKLALDALVIQQ---GRLAEQKTVNKDELLQMV 664
+K + A + G A + TV+ + L MV
Sbjct: 1013 QEEKRTMVASAFGEEHGGSSATRLTVDDLKYLFMV 1047
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 319 IIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAET 378
I++DEA IKN + ++++ R ++GTP+QN + +L+S FL + ++ ++
Sbjct: 545 IVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFRFLRYDPYAVYKS 604
Query: 379 FDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETILKVGMSQM 433
F ++ + + ++L VLR +LRR K + G LPPK + +V S
Sbjct: 605 FYSTIKVPISRNSCQGYKKLQAVLRAIMLRRTKGTLLDGKPIINLPPKVVNLSQVDFSVA 664
Query: 434 QKQYYKALLQKDLE----VVNAGGERKRLLNI---AMQLRKCCNHPYLFQ 476
++ +YK L +AG + NI ++LR+ C+HP L +
Sbjct: 665 ERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQLVK 714
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Query: 507 LKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFV 566
+K + ++FSQ T++L++LE L+ Y R+DG RD ++ FN E V
Sbjct: 961 IKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNT-LPEVTV 1019
Query: 567 FLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIE 626
++S +A LG+N+ A V++ D WNP + QA DRAHRIGQ + V V RF + T+E
Sbjct: 1020 MIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVE 1079
Query: 627 EKVIERAYKK 636
++++ KK
Sbjct: 1080 DRILALQQKK 1089
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 319 IIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAET 378
+++DEA IKN + +++ R ++GTP+QN++ +L+S FL + +SS
Sbjct: 632 VVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSYVL 691
Query: 379 FDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETILKVGMSQM 433
F + + + Q+L +L+ +LRR K + G LPPK + KV +
Sbjct: 692 FCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIELRKVDFTVE 751
Query: 434 QKQYYKALLQKD----LEVVNAGGERKRLLNI---AMQLRKCCNHPYLFQG 477
++ +Y L + E AG ++ +NI ++LR+ C+HP L G
Sbjct: 752 ERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG 802
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Query: 507 LKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFV 566
+K + ++FSQ T++L++LE L+ Y R+DG RD ++ FN E V
Sbjct: 1119 IKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL-PEVTV 1177
Query: 567 FLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIE 626
++S +A LG+N+ A V++ D WNP + QA DRAHRIGQ + V V RF + T+E
Sbjct: 1178 MIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVE 1237
Query: 627 EKVIERAYKK 636
++++ KK
Sbjct: 1238 DRILALQQKK 1247
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 319 IIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAET 378
+++DEA IKN + +++ R ++GTP+QN++ +L+S FL + +SS
Sbjct: 790 VVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSYVL 849
Query: 379 FDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETILKVGMSQM 433
F + + + Q+L +L+ +LRR K + G LPPK + KV +
Sbjct: 850 FCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIELRKVDFTVE 909
Query: 434 QKQYYKALLQKD----LEVVNAGGERKRLLNI---AMQLRKCCNHPYLFQG 477
++ +Y L + E AG ++ +NI ++LR+ C+HP L G
Sbjct: 910 ERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG 960
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 122/510 (23%), Positives = 210/510 (41%), Gaps = 86/510 (16%)
Query: 195 GKMRDYQLAGLNWLI-RLYENGING-ILADEMGLGKTLQTISLL-GYLHEFKGIKGPHMV 251
+M+ +Q+ G +L L + G I+A G GKT IS + +L ++ K +V
Sbjct: 348 AEMKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAK--PLV 405
Query: 252 VAPKSTLGNWMNEIRRF----CPILRAVKFLGNPDERRHI----------REDLLVAG-- 295
V PK L W E R+ P+L F E R ++ +L G
Sbjct: 406 VLPKGILPTWKKEFVRWQVEDIPLL---DFYSAKAENRAQQLSILKQWMEKKSILFLGYQ 462
Query: 296 KFDVCV---TSFEMAIKEKTASIKRNIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGT 352
+F V T+ ++ +E + +I+DE H +NE++ L +++ T +++++GT
Sbjct: 463 QFSTIVCDDTTDSLSCQEILLKVPSILILDEGHTPRNEDTNLLQSLAQVQTPRKVVLSGT 522
Query: 353 PLQNNLHELWSLLNFLLPEIF-----------------------------SSAETFDEWF 383
QN++ E++++LN + P+ A F+E
Sbjct: 523 LYQNHVKEVFNILNLVRPKFLKLDTSKSAVKRILAYTPCDVRGRLTGSNSDMASMFNETV 582
Query: 384 QISGENDQQ-----EVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYY 438
+ + + + +V+Q L ++ + +L K D LP + + + +S Q
Sbjct: 583 EHTLQKSEDFTVKIKVIQDLREMTKK-VLHYYKGDFLDELPGLADFTVVLNLSPKQLNEV 641
Query: 439 KALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYL--FQGAEPGPPYTTGDHLI----T 492
K L ++ KR ++ HP L F TT D ++
Sbjct: 642 KKLRRE-----------KRKFKVSAVGSAIYLHPKLKVFSDKSDDVSDTTMDEMVEKLDL 690
Query: 493 NAG-KMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYL-MFRGYLYCR----IDGNTG 546
N G K L+ ++L+FSQ L LE + +G+ + + GNT
Sbjct: 691 NEGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTS 750
Query: 547 GDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH 606
+ R+ S++ FN K +F S +A G GI+L A +++ D NP V QA RA
Sbjct: 751 SEQREWSMETFNSSPDAK-IFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAF 809
Query: 607 RIGQKKEVQVFRFCTEYTIEEKVIERAYKK 636
R GQKK V +R + EE+ +KK
Sbjct: 810 RPGQKKMVHAYRLIAGSSPEEEDHNTCFKK 839
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 4/155 (2%)
Query: 513 RVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTR 572
+ +IFSQ T +LD++E L+ + R+DG RD ++ F+ K V ++S +
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVK-VMIMSLK 886
Query: 573 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 632
AG LG+N+ A VIL D WNP + QA DRAHRIGQ + V V R + T+E++++
Sbjct: 887 AGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILAL 946
Query: 633 AYKKLALDALVIQQ---GRLAEQKTVNKDELLQMV 664
+K + A + G A + TV+ + L MV
Sbjct: 947 QEEKRKMVASAFGEDHGGSSATRLTVDDLKYLFMV 981
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 16/172 (9%)
Query: 319 IIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAET 378
+++DEA IKN + +++ R ++GTP+QN + +L+S FL + ++ ++
Sbjct: 474 VVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAVYKS 533
Query: 379 FDEWFQISGENDQQEV--VQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETILKVGMS 431
F QI G + + ++L VLR +LRR K + G LPPK + +V S
Sbjct: 534 F--CHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIINLPPKTINLSQVDFS 591
Query: 432 QMQKQYYKAL---LQKDLEVVNAGGERKR----LLNIAMQLRKCCNHPYLFQ 476
++ +Y L + + A G + +L + ++LR+ C+HP L +
Sbjct: 592 VEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQLVK 643
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Query: 512 SRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLST 571
+++++F+ ++LD +++++ +G + RIDG T DR ++ +F SE + ++
Sbjct: 555 TKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQF-SSEVKIAIIGV 613
Query: 572 RAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIE 631
AGG+G++ + A V+ + P + LQA+DRAHR GQ V V+ FC + T++E +
Sbjct: 614 EAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDESNWQ 673
Query: 632 RAYKKL 637
KKL
Sbjct: 674 NLNKKL 679
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 42/268 (15%)
Query: 188 TQPACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFKGIKG 247
T P + + +QL GL + +R G +ADEMGLGKTLQ I++ G +G
Sbjct: 195 TLPRKLVNALLPFQLDGLRFGLR---RGGRCFIADEMGLGKTLQAIAIAGCFIS----EG 247
Query: 248 PHMVVAPKSTLGNWMNEIRRFCPILRAVK---FLGNPDERRHIREDLLVAGKFDVCVTSF 304
+VV P W E+ R+ P G+ D ++ V V S+
Sbjct: 248 SILVVCPAVLRFTWAEELERWLPSCLPSDVHLVFGHQDNPAYLPR------WPKVVVISY 301
Query: 305 EMAIKEKTASIKRN---IIIDEAHRI-----KNENSLLSKTMRLYS-TNYRLLITGTPLQ 355
+M +T ++R +I+DE+H + K++ + + + + +L++GTP
Sbjct: 302 KMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGTPSV 361
Query: 356 NNLHELWSLLNFLLPEI-----FSSAETFDEWFQISGENDQQEVVQQLHKVLR------- 403
+ +++ +N L P + + A+T+ E + G Q ++ Q K R
Sbjct: 362 SRPFDIFHQINMLWPGLLGKDKYEFAKTYCEVGLVRG--IQGKIFQDFSKGTRLLELNIL 419
Query: 404 ---PFLLRRLKSDVEKGLPPKKETILKV 428
++RRLK + LPPK+ I+ +
Sbjct: 420 LNQTVMIRRLKQHLLTQLPPKRRQIVTI 447
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 135/334 (40%), Gaps = 66/334 (19%)
Query: 190 PACIQGKMRDYQLAGLNWLIR---LYENGINGILADEMGLGKTLQTISLLGYLHEFKGIK 246
P + + +Q LNW+ + + + GILAD+ GLGKT+ TISL+ L + K
Sbjct: 46 PGVLTVPLMRHQKIALNWMRKKEKRSRHCLGGILADDQGLGKTISTISLI-LLQKLKSQS 104
Query: 247 ----------GPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIREDLLVAGK 296
G ++V P S + W E++ + L + R +D
Sbjct: 105 KQRKRKGQNSGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHR--TKDPTEIAI 162
Query: 297 FDVCVTSFEMAIKEKTASIKRN-------------------------------IIIDEAH 325
+DV +T++ + E + N +++DEAH
Sbjct: 163 YDVVMTTYAIVTNEVPQNPMLNRYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAH 222
Query: 326 RIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQI 385
IKN +L++K R +TGTP++N + +L+S FL ++ +F + +
Sbjct: 223 TIKNHRTLIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKA 282
Query: 386 SGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKA--LLQ 443
+ ++L +LR +LRR K E K E S+ + + Y A L
Sbjct: 283 PIDKKPLHGYKKLQAILRGIMLRRTK---EWSFYRKLEL-----NSRWKFEEYAADGTLH 334
Query: 444 KDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQG 477
+ + LL + ++LR+ CNHP L G
Sbjct: 335 EHMAY---------LLVMLLRLRQACNHPQLVNG 359
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 539 CRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVD 598
CR + ++D SI L+S +AG LG+N+ A VIL D WNP +
Sbjct: 488 CRARQSRHSTNKDNSISGL------VCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTE 541
Query: 599 LQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVI 630
QA DRAHRIGQ + V V R + T+EE+++
Sbjct: 542 DQAIDRAHRIGQTRAVTVTRIAIKNTVEERIL 573
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 319 IIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAET 378
+++DEA IKN + +++ R ++GTP+QN++ +L+S FL + +SS
Sbjct: 797 VVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSYVL 856
Query: 379 FDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETILKVGMSQM 433
F + + + Q+L +L+ +LRR K + G LPPK + KV +
Sbjct: 857 FCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIELRKVDFTVE 916
Query: 434 QKQYYKALLQKD----LEVVNAGGERKRLLNI---AMQLRKCCNHPYLFQG 477
++ +Y L + E AG ++ +NI ++LR+ C+HP L G
Sbjct: 917 ERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG 967
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 489 HLITNAGKMVLLDKLLPKLKERDSRVLIFSQ----MTRLLDILEDYLMF-RGYLYCRIDG 543
H K++ + L+ ++ +R+ ++LIF + L++ E+ + RG + G
Sbjct: 1051 HDAKKGSKVMFVLNLVFRVVKRE-KILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTG 1109
Query: 544 NTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQD 603
+ +R ID F +PG + V L S A GI+L A VI+ DS+WNP QA
Sbjct: 1110 DLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIA 1169
Query: 604 RAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQ 646
RA R GQ+K V V++ + T+EE R K + +++ +
Sbjct: 1170 RAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFSE 1212
>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 14/178 (7%)
Query: 465 LRKCCNHPYLFQGA------EPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFS 518
+RK C+HPY+ + + + D I +GK+ LLDK+L +K+ + ++F
Sbjct: 523 VRKTCDHPYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFY 582
Query: 519 QMTR------LLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTR 572
Q T+ L +ILED++ R + + ++++I+ FNK S+ V LL TR
Sbjct: 583 QATQTPEGLLLGNILEDFVGQR-FGPKSYEHGIYSSKKNSAINNFNK-ESQCCVLLLETR 640
Query: 573 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVI 630
A I L AD IL+ S NP D++ ++ + ++FR + T+EEK +
Sbjct: 641 ACSQTIKLLRADAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCTVEEKAL 698
>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 14/178 (7%)
Query: 465 LRKCCNHPYLFQGA------EPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFS 518
+RK C+HPY+ + + + D I +GK+ LLDK+L +K+ + ++F
Sbjct: 523 VRKTCDHPYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFY 582
Query: 519 QMTR------LLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTR 572
Q T+ L +ILED++ R + + ++++I+ FNK S+ V LL TR
Sbjct: 583 QATQTPEGLLLGNILEDFVGQR-FGPKSYEHGIYSSKKNSAINNFNK-ESQCCVLLLETR 640
Query: 573 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVI 630
A I L AD IL+ S NP D++ ++ + ++FR + T+EEK +
Sbjct: 641 ACSQTIKLLRADAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCTVEEKAL 698
>AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases;ATP
binding;nucleic acid binding | chr2:17013535-17021315
REVERSE LENGTH=1664
Length = 1664
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 59/133 (44%), Gaps = 20/133 (15%)
Query: 512 SRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGDDRDASIDAFNKPGSEK------- 564
++VL+FS +LD+LE R+ GG +I F GSEK
Sbjct: 1450 TKVLVFSSWNDVLDVLEHAFAANSITCIRM---KGGRKSQTAISKFK--GSEKETQKTNS 1504
Query: 565 --------FVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQV 616
V LL + G G+NL A VIL + NP + QA R HRIGQ+K V
Sbjct: 1505 HQKEEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLV 1564
Query: 617 FRFCTEYTIEEKV 629
RF T+EE +
Sbjct: 1565 HRFLVSGTVEESI 1577
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 112/283 (39%), Gaps = 58/283 (20%)
Query: 247 GPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRHIRE----DLLVAGKFDVCVT 302
G ++V P L W +EI R + + + + E D+ D+ +T
Sbjct: 500 GATLIVCPAPILPQWHSEITRHTRLGSLITCIYEGVRNASLSEEPMIDITELLNADIVLT 559
Query: 303 SFEMAIKEKTASIKRN---------------------------IIIDEAHRIK-NENSLL 334
++++ ++ T R+ I +DEA ++ N +
Sbjct: 560 TYDVLKEDLTHDFDRHDGDRHCLRFQKRYPVIPTPLTRIFWWRICLDEAQMVESNAAAAT 619
Query: 335 SKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEV 394
+RLY T +R ITGTP+Q L +L+ LL FL F + + E + E +
Sbjct: 620 EMALRLY-TKHRWCITGTPIQRKLDDLFGLLKFLKANPFDVSRWWIEVIRDPYERRDTKA 678
Query: 395 VQQLHKVLRPFLLRRLKSDV--EKGLPPKKETILKVGMSQMQKQYYK------------- 439
++ HK + + R K V E LPP++E + + S +++ +Y
Sbjct: 679 MEFTHKFFKQVMWRSSKVHVADELQLPPQEECVSWLKFSAIEEHFYSRQHDTCVSYAREV 738
Query: 440 -ALLQKDL---------EVVNAGGERKRLLNIAMQLRKCCNHP 472
L++D+ + E +LLN ++LR+ C HP
Sbjct: 739 IETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACCHP 781