Miyakogusa Predicted Gene
- Lj6g3v1919360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1919360.1 CUFF.60210.1
(3213 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71580 similar to UniRef100_UPI000016335A Cluster: CHR... 952 0.0
gnl|LJGI|BW598529 similar to UniRef100_A7NW74 Cluster: Chromosom... 440 e-122
gnl|LJGI|BP061107 similar to UniRef100_A7NW74 Cluster: Chromosom... 283 3e-75
gnl|LJGI|TC71839 similar to UniRef100_A7NW74 Cluster: Chromosome... 232 1e-59
gnl|LJGI|TC76574 218 2e-55
gnl|LJGI|TC75980 similar to UniRef100_UPI000016335A Cluster: CHR... 172 9e-42
gnl|LJGI|AU252126 similar to UniRef100_UPI000016335A Cluster: CH... 64 6e-09
>gnl|LJGI|TC71580 similar to UniRef100_UPI000016335A Cluster: CHR11
(CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase;
n=1; Arabidopsis thaliana|Rep: CHR11
(CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase
- Arabidopsis thaliana, partial (15%)
Length = 691
Score = 952 bits (480), Expect = 0.0
Identities = 494/498 (99%), Gaps = 3/498 (0%)
Strand = Plus / Plus
Query: 1 atggcgagaccatcgaagacgcagtcatcttccgacgaatcactctccaacagctccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 atggcgagaccatcgaagacgcagtcatcttccgacgaatcactctccaacagctccagt 125
Query: 61 tcttcagaggaagagcaacaaattgaacaaatcaacgacgaagaagacgaggaggagctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tcttcagaggaagagcaacaaattgaacaaatcaacgacgaagaagacgaggaggagctc 185
Query: 121 gaagcggtggcgcgtcccgctagctccggcgacgacgaagttgcggaggatattccgccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gaagcggtggcgcgtcccgctagctccggcgacgacgaagttgcggaggatattccgccg 245
Query: 181 gattccgatgaagatcctgccgccgctgaagatgctgatgacg---acgacgaacagggt 237
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 246 gattccgatgaagatcctgccgccgctgaagatgctgatgacgacgacgacgaacagggt 305
Query: 238 ggggatcatgttgatcctgaaattagaaagcgtgagaagagtaggttaagggaaatgcag 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ggggatcatgttgatcctgaaattagaaagcgtgagaagagtaggttaagggaaatgcag 365
Query: 298 ataatgaagaagcagaaggttcaggagattttggatgctcaaaatgcagccattgatgct 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ataatgaagaagcagaaggttcaggagattttggatgctcaaaatgcagccattgatgct 425
Query: 358 gacatgaacaatagaggaaaggggcgtctgaagtatctgttacagcagacggagctgttt 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gacatgaacaatagaggaaaggggcgtctgaagtatctgttacagcagacggagctgttc 485
Query: 418 gcgcattttgctaagggtgatcagtcttcatctgtgaagaagtcacgaggaaggggccgc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gcgcattttgctaagggtgatcagtcttcatctgtgaagaagtcacgaggaaggggccgc 545
Query: 478 catgcatcaaaagtgact 495
||||||||||||||||||
Sbjct: 546 catgcatcaaaagtgact 563
Score = 172 bits (87), Expect = 9e-42
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 537 tggttcagcaaacacacgcctagtgacacaaccagcatgtatccaaggaaaaatgaggga 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tggttcagcaaacacacgcctagtgacacaaccagcatgtatccaaggaaaaatgaggga 664
Query: 597 ttaccagctggctggattgaactggct 623
|||||||||||||||||||||||||||
Sbjct: 665 ttaccagctggctggattgaactggct 691
>gnl|LJGI|BW598529 similar to UniRef100_A7NW74 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (15%)
Length = 476
Score = 440 bits (222), Expect = e-122
Identities = 378/430 (87%)
Strand = Plus / Plus
Query: 2210 ttgtgagtgaaaattggattgaaccaccaaagagggagcggaagcgcaattactcagagt 2269
|||||| |||||| ||| | |||||| ||| || || |||||||||||||||||||| |
Sbjct: 47 ttgtgactgaaaactgggtcgaaccatcaagaagagaacggaagcgcaattactcagaat 106
Query: 2270 ctgaatacttcaagcaaactatgcgtcaaggtggtcctactaaacaaaaagagccccgta 2329
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 107 ctgaatacttcaagcaaactatgcgtcaaggtggtcctactaaaccaaaagagcctcgta 166
Query: 2330 ttcctaggaggccccagttgcatgatttccagttcttcaacacacacaggctgactgagc 2389
|||| |||| ||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 167 ttccaaggatgcctcaattgcatgatttccagtttttcaacacacacaggctgaatgagc 226
Query: 2390 tgtatgaaaaggaagtacgcaatctcatgcaagcacatcagaagaatcaaataaaggatt 2449
|||||||||||||||| ||| ||| ||||||||||||||||||| ||| | ||||| |
Sbjct: 227 tgtatgaaaaggaagttcgccgtctaatgcaagcacatcagaagagtcaggtgaaggact 286
Query: 2450 cgatagatgttgatgaaccagaagaggtgggagaaccattgactgctgaagagttggaag 2509
| ||||||||||||||||||||||| | ||||| || |||||| ||||||| ||||||
Sbjct: 287 ccatagatgttgatgaaccagaagaaattggagattcactgactgttgaagaggtggaag 346
Query: 2510 aaaaggaacgcctgctagaagagggattttcatcatggagccggagagattttaatactt 2569
||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||| |||
Sbjct: 347 aaaaggagcgcctgctagaggagggattttcatcatggagccggaaggattttaatgctt 406
Query: 2570 ttcttagggcctgtgaaaagtatggacggagtgatataataaatattgcttctgagatgg 2629
| ||||||| |||||||||||||| || | ||| ||| || ||||||||||||||| |
Sbjct: 407 tcattagggcatgtgaaaagtatggccgaaatgacatacaaagtattgcttctgagattg 466
Query: 2630 aaggaaaaac 2639
||||||||||
Sbjct: 467 aaggaaaaac 476
>gnl|LJGI|BP061107 similar to UniRef100_A7NW74 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 157
Score = 283 bits (143), Expect = 3e-75
Identities = 157/159 (98%), Gaps = 2/159 (1%)
Strand = Plus / Minus
Query: 2377 aggctgactgagctgtatgaaaaggaagtacgcaatctcatgcaagcacatcagaagaat 2436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aggctgactgagctgtatgaaaaggaagtacgcaatctcatgcaagcacatcagaagaat 98
Query: 2437 caaataaaggattcgatagatgttgatgaaccagaagaggtgggagaaccattgactgct 2496
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 97 caaataaaggattcgatagatgttgatgaaccagaagaggtgggagaacc-ttgactgct 39
Query: 2497 gaagagttggaagaaaaggaacgcctgctagaagaggga 2535
||||||||||||||||||| |||||||||||||||||||
Sbjct: 38 gaagagttggaagaaaagg-acgcctgctagaagaggga 1
>gnl|LJGI|TC71839 similar to UniRef100_A7NW74 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 728
Score = 232 bits (117), Expect = 1e-59
Identities = 192/217 (88%)
Strand = Plus / Plus
Query: 2870 gatttatgatatgcatggttcacaaactcggctatgggaactgggatgagttgaaggcag 2929
|||| ||||||||||||||||||||||| ||||||||||| |||||||| ||||| | |
Sbjct: 3 gattcatgatatgcatggttcacaaacttggctatgggaattgggatgaattgaaatcgg 62
Query: 2930 catttcgaacatctcccttgtttagatttgattggtttgttaagtctcgcacaacacagg 2989
| ||||||| || |||||||||| |||||||||||||| ||||||||||| || ||||
Sbjct: 63 cgtttcgaatgtcgcccttgtttaagtttgattggtttgtgaagtctcgcacgacgcagg 122
Query: 2990 aactagccaggaggtgtgacaccctcattcggctggtagaaaaggaaaaccaagaatatg 3049
|||| | |||||||| |||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 123 aactgacaaggaggtgcgacaccctcattcggctgatagagaaggaaaaccaagaatatg 182
Query: 3050 atgagagggagagacaagctcgtaaagagaaaaaact 3086
|||||||||||||||||||||| ||||| || |||||
Sbjct: 183 atgagagggagagacaagctcgcaaagaaaagaaact 219
>gnl|LJGI|TC76574
Length = 494
Score = 218 bits (110), Expect = 2e-55
Identities = 126/130 (96%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 3070 cgtaaagagaaaaaactggccaagagcatgaccccatcaaagcgtgctgtggctagacaa 3129
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 cgtaaagagaaagaactggccaagagcatgaccccatccaagcgtgctgtggctagacaa 60
Query: 3130 acagagtctccatcttcta-caaagaagcgcaagcaattaactatggatgattatgcaag 3188
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acagagtctccatcttctaccaaagaagcgcaagcaattaactatggatgattatgcaag 120
Query: 3189 cacggggaag 3198
| ||||||||
Sbjct: 121 cccggggaag 130
>gnl|LJGI|TC75980 similar to UniRef100_UPI000016335A Cluster: CHR11
(CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase;
n=1; Arabidopsis thaliana|Rep: CHR11
(CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase
- Arabidopsis thaliana, partial (13%)
Length = 575
Score = 172 bits (87), Expect = 9e-42
Identities = 207/247 (83%)
Strand = Plus / Plus
Query: 249 tgatcctgaaattagaaagcgtgagaagagtaggttaagggaaatgcagataatgaagaa 308
||||||||||||||| || || |||||| |||| ||| |||| ||||| | |||||||
Sbjct: 242 tgatcctgaaattagcaaacgcgagaaggctaggctaaaggaattgcagcaattgaagaa 301
Query: 309 gcagaaggttcaggagattttggatgctcaaaatgcagccattgatgctgacatgaacaa 368
||||||| |||||||||| ||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 302 gcagaagattcaggagatactggatgcacaaaatgcagccattgatgctgatatgaacaa 361
Query: 369 tagaggaaaggggcgtctgaagtatctgttacagcagacggagctgtttgcgcattttgc 428
|||||||||||| | |||| ||||| || |||||||| ||| ||||||| ||||| ||
Sbjct: 362 tagaggaaagggtaggttgaactatctcttgcagcagactgagttgtttgctcatttagc 421
Query: 429 taagggtgatcagtcttcatctgtgaagaagtcacgaggaaggggccgccatgcatcaaa 488
|| | |||||| ||||||||| |||||| | |||||||| ||||||||||||||
Sbjct: 422 caaagctgatcaatcttcatctcaaaagaagggaaagggaaggggacgccatgcatcaaa 481
Query: 489 agtgact 495
|||||||
Sbjct: 482 agtgact 488
>gnl|LJGI|AU252126 similar to UniRef100_UPI000016335A Cluster: CHR11
(CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase;
n=1; Arabidopsis thaliana|Rep: CHR11
(CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase -
Arabidopsis thaliana, partial (5%)
Length = 350
Score = 63.9 bits (32), Expect = 6e-09
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 1403 gttgtaatcatccatatctttttcaaggagctgaacctggtcctccctatacaacaggag 1462
|||||||||| ||||||| || ||||| |||||||||||||||||| |||| || |||
Sbjct: 46 gttgtaatcaatcatatctcttccaaggtgctgaacctggtcctccc--tacaccatgag 103
Query: 1463 accatctcattaccaatgc 1481
| ||||||||||| |||||
Sbjct: 104 atcatctcattacaaatgc 122