Miyakogusa Predicted Gene

Lj6g3v1915870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1915870.1 Non Chatacterized Hit- tr|Q9FGU0|Q9FGU0_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,34.24,6e-18,FIP1-LIKE 1 PROTEIN,NULL; seg,NULL; Fip1,Pre-mRNA
polyadenylation factor Fip1,CUFF.60150.1
         (1038 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g15050.1                                                       586   e-167
Glyma09g04030.1                                                       365   e-100
Glyma09g04020.1                                                       107   9e-23
Glyma09g13570.1                                                        98   4e-20
Glyma15g33980.1                                                        94   6e-19

>Glyma15g15050.1 
          Length = 564

 Score =  586 bits (1510), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 341/576 (59%), Positives = 414/576 (71%), Gaps = 30/576 (5%)

Query: 481  LNKHNENDNHVSSILMSGARDLSQLGSQFVDYGSRHREQLQGFGSHKRRDVSYTRETKQT 540
            +NKH ENDN VS IL S AR+LS L  + VDYG RH++QLQ FGSHKRRD+S  RETKQ+
Sbjct: 1    MNKHTENDNDVS-ILKSSARNLSLLAHRPVDYG-RHKDQLQVFGSHKRRDLSCNRETKQS 58

Query: 541  CYYGGEKAVDDLVQRDHSKYSYEEGRVRDKTNRYYRKNWGVRNYFSKPGSRMARYEDRER 600
             YYGGEK +D+LV      Y  +    R+ TNRY RKN  V +YF +PG   A  EDR+R
Sbjct: 59   YYYGGEKVIDELVSWRSKYYHEDRESFRENTNRYDRKNGDVGDYFFEPGPGFADSEDRDR 118

Query: 601  DHYHDGWGYAADDLNPDSCRESMLLLPKHSSFPHQERDTQRERINDKSYFRDRNYNDDFD 660
            D YH G G+++DDL P S RES    PKHSSFP +ER T R+R+++KS   +RN  DDFD
Sbjct: 119  DWYHLGCGHSSDDLCPCSYRESRQFPPKHSSFPDKERYTPRKRMDEKSLI-ERNCIDDFD 177

Query: 661  ECEIEFSNKSYRMSPYSAEIEMEYLNNKRDEQFLHTDRDWRGSVRRVKHRGEPPLVLDNL 720
            ECE EF NKSYRMS   AE E E+L+N R+EQF H  RDWR SVRR +   +PPLVL+NL
Sbjct: 178  ECEFEFLNKSYRMSTV-AEREQEFLDNNREEQFPHIYRDWRRSVRRGRRFDKPPLVLNNL 236

Query: 721  WSGKM--DEKCQAYTHHQNSNFRYRRQS-THSVRNVC-GARVKENFEYHTHAAEDEDFML 776
             SG M  ++ CQ YTH + SNF++RRQS T SV+N   G+RV  N         DEDF +
Sbjct: 237  CSGTMEVEDNCQKYTHFRTSNFKHRRQSYTDSVKNYAYGSRVNGNL-------GDEDFRI 289

Query: 777  YPVEEYQCYRSSSKFQNCTEEELVFRHHETHATSLQDDMQIDDIKLRQHQLNMPRRNNNG 836
             PV+EYQ YRS SKF N TE+E++F  HETHATSL   +Q DD+ L+QHQL+MP+R+N  
Sbjct: 290  CPVKEYQFYRSPSKFLNWTEDEIIFMRHETHATSLFTKVQSDDLPLQQHQLSMPKRDNEK 349

Query: 837  F--KSSKVICRSNLRQAALRCRKSVDLVNGEGKSQARSSGIFCSGRLQFVDEGIAKK-PR 893
            +   SSK++CRS   QA LRCRKSVDL++GEGKSQ RSS + C+GRL+ V++GIAKK  R
Sbjct: 350  YFKGSSKIMCRSKGGQAVLRCRKSVDLIHGEGKSQVRSSRVSCNGRLENVNQGIAKKRKR 409

Query: 894  ASVGLAESRKKAITFETSKYESNLENKKCLQNLQDKGHKESLDIEEGQVVPEELFTVS-S 952
            ASVG  ES K    F++ KYESNL++KK +QNLQD+  KES DIEEGQ+V EE +    S
Sbjct: 410  ASVGFDESNKNTFKFDSPKYESNLKSKKWVQNLQDQAQKESSDIEEGQIVAEEPYMEKVS 469

Query: 953  VSRKDVSEGAA---------KSQHENNSDQFIGGYDNQRILDSLAKMEKRGERFKQPITL 1003
            VSR+D SEG A          SQ+EN+SDQ+IGGYD+QRILDSLAKMEKR ERFKQP+T+
Sbjct: 470  VSRRDASEGPAVTDSVNKKRMSQNENSSDQYIGGYDSQRILDSLAKMEKRRERFKQPMTM 529

Query: 1004 KTEAEEEGLKLNNDS-VDAGEAKQHRPARKRRWVGS 1038
            K EA EE LKLNNDS VD GE KQHRP RKRRWVG+
Sbjct: 530  KKEA-EESLKLNNDSIVDTGEMKQHRPTRKRRWVGN 564


>Glyma09g04030.1 
          Length = 450

 Score =  365 bits (937), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 215/408 (52%), Positives = 270/408 (66%), Gaps = 41/408 (10%)

Query: 484 HNENDNHVSSILMSGARDLSQLGSQFVDYGSRHREQLQGFGSHKRRDVSYTRETKQTCYY 543
           H ENDN VS IL S AR+LS L  + VDYG RH+++LQ FGSHK RD+S  RETKQ+ YY
Sbjct: 1   HTENDNDVS-ILKSSARNLSLLARRPVDYG-RHKDRLQVFGSHKIRDLSCNRETKQSYYY 58

Query: 544 GGEKAVDDLVQRDHSKYSYEEGRVRDKTNRYYRKNWGVRNYFSKPGSRMARYEDRERDHY 603
           G EK VD+LV      Y  ++  +R+ TNR+ RKN  V +YF +PG R A  EDRERD Y
Sbjct: 59  GDEKVVDELVACRSKYYHEDQESLRENTNRHDRKNGDVEDYFFEPGPRFADSEDRERDWY 118

Query: 604 HDGWGYAADDLNPDSCRESMLLLPKHSSFPHQERDTQRERINDKSYFRDRNYNDDFDECE 663
           H G  Y++DDL+P S RES    PKHSSFP +ER TQ +R++ KS+F DRN  DDFDECE
Sbjct: 119 HLGCEYSSDDLSPCSYRESRKFPPKHSSFPDEERYTQGKRMDGKSHFIDRNCIDDFDECE 178

Query: 664 IEFSNKSYRMSPYSAEIEMEYLNNKRDEQFLHTDRDWRGSVRRVKHRGEPPLVLDNLWSG 723
            +               E+E+L+N R+EQF H DRDWR SV R +H   PPLVL+NL SG
Sbjct: 179 FK---------------ELEFLDNYREEQFPHIDRDWRRSVCRGRHYDSPPLVLNNLCSG 223

Query: 724 KM--DEKCQAYTHHQNSNFRYRRQS-THSVRNVC-GARVKENFE---------------- 763
            M  ++ CQ YTH Q S+F+YRRQS T S +N   G RV  NF                 
Sbjct: 224 IMEVEDNCQKYTHCQTSSFKYRRQSYTDSAKNYAYGERVNGNFGGSGRDKHARDNRGSNW 283

Query: 764 --YHTHAAEDEDFMLYPVEEYQCYRSSSKFQNCTEEELVFRHHETHATSLQDDMQIDDIK 821
              +T  AEDEDF +YPV++YQ YRS SKF N TE+E+++RHHETHATSL   +Q DD+ 
Sbjct: 284 LCGYTDTAEDEDFPIYPVKKYQFYRSPSKFLNWTEDEIIYRHHETHATSLFAKVQSDDLP 343

Query: 822 LRQHQLNMPRRNNNGF--KSSKVICRSNLRQAALRCRKSVDLVNGEGK 867
           L++HQL+MP R++  +   SSK++CRS   QA LRCRKSVDL++GEGK
Sbjct: 344 LQRHQLSMPIRDSEKYFKGSSKIMCRSKGGQALLRCRKSVDLIHGEGK 391


>Glyma09g04020.1 
          Length = 237

 Score =  107 bits (266), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 95/201 (47%), Gaps = 65/201 (32%)

Query: 79  STFVHNPQHLRTQGQGGSLFANNQMKKSNPSSMAMPSSFNNM---------------TSS 123
           S F H P+  R++G    L   N MK +  +SM M S  +++                SS
Sbjct: 81  SRFFH-PKTGRSRG----LAILNNMKAN--ASMGMASYISSLNKGRRNGDACIQNLALSS 133

Query: 124 HLYAAAPNPMVSHQGGYSWFLPSYWSAFNVNVDALKEKPWVFSGVHKTDYFNYGFDETTW 183
                A NPM + Q GY   LP YW  F+VN D L EK W   GV  TDYFN+GF+E+TW
Sbjct: 134 SRVCLAANPM-AVQCGYGSALPWYWGIFDVNTDTLTEKLWKVPGVDITDYFNFGFNESTW 192

Query: 184 KLYCTSLEQHWRTSTQQEQHWRASTQQEQHWRASTQTGISVDGSAKLNKPKGKAIRVEES 243
           KLYC+SL                                          PKG+AI+VE+S
Sbjct: 193 KLYCSSL------------------------------------------PKGRAIQVEDS 210

Query: 244 MGERQPSIHLRRPVSRDSDVV 264
           M ERQPSI +RRP +RD +V+
Sbjct: 211 MVERQPSIDVRRPRNRDFNVI 231


>Glyma09g13570.1 
          Length = 1282

 Score = 98.2 bits (243), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 85/173 (49%), Gaps = 30/173 (17%)

Query: 138 GGYSWFLPSYWSAFNVNVDALKEKPWVFSGVHKTDYFNYGFDETTWKLYCTSLEQHWRTS 197
           GG  + LPS+ + F+V ++  +EKPW +  V  +D+FN+G +E +WK YC  LEQ    S
Sbjct: 330 GGLEFTLPSHKTIFDVEIENFEEKPWKYPNVDISDFFNFGLNEESWKDYCKQLEQLRLES 389

Query: 198 TQQEQ-HWRASTQQEQHW------RASTQTGI-----------------------SVDGS 227
           T Q +     S + EQ +        +  TGI                       S  G 
Sbjct: 390 TMQSKIRVYESGRTEQEYDPDLPPELAAATGIHDVPGEHTNSLKSDVGQSDVMKGSGTGR 449

Query: 228 AKLNKPKGKAIRVEESMGERQPSIHLRRPVSRDSDVVIEIKVLESSDDHSGSG 280
            +   P G+AI+VE   G+R PSI  R P  RDSD +IEI + ++ DD S +G
Sbjct: 450 VRPPLPTGRAIQVEGGYGDRLPSIDTRPPRIRDSDAIIEIVLQDTEDDESSAG 502


>Glyma15g33980.1 
          Length = 1137

 Score = 94.4 bits (233), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 30/169 (17%)

Query: 142 WFLPSYWSAFNVNVDALKEKPWVFSGVHKTDYFNYGFDETTWKLYCTSLEQHWRTSTQQE 201
           + LPS+ + F+V+++  +EKPW +  +  +D+FN+G +E +WK YC  LEQ    ST Q 
Sbjct: 321 FTLPSHKTIFDVDIENFEEKPWQYPNIDTSDFFNFGLNEESWKDYCKQLEQLRLESTMQS 380

Query: 202 Q-HWRASTQQEQHW------RASTQTGI-----------------------SVDGSAKLN 231
           +     S + EQ +        +  TGI                       S  G  +  
Sbjct: 381 KIRVYESGRTEQEYDPDLPPELAAATGIHDSPVENTNSLKSDVGQSDVMKGSGTGRVRPP 440

Query: 232 KPKGKAIRVEESMGERQPSIHLRRPVSRDSDVVIEIKVLESSDDHSGSG 280
            P G+AI+VE   G+R PSI  R P  RDSD +IEI + ++ DD S +G
Sbjct: 441 LPTGRAIQVEGGYGDRLPSIDTRPPRIRDSDAIIEIVLQDTEDDQSSAG 489