Miyakogusa Predicted Gene
- Lj6g3v1915870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1915870.1 Non Chatacterized Hit- tr|Q9FGU0|Q9FGU0_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,34.24,6e-18,FIP1-LIKE 1 PROTEIN,NULL; seg,NULL; Fip1,Pre-mRNA
polyadenylation factor Fip1,CUFF.60150.1
(1038 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G58040.1 | Symbols: ATFIP1[V], FIPS5, ATFIPS5, FIP1[V] | homo... 104 4e-22
AT3G66652.2 | Symbols: | fip1 motif-containing protein | chr3:2... 70 9e-12
AT3G66652.1 | Symbols: | fip1 motif-containing protein | chr3:2... 70 9e-12
>AT5G58040.1 | Symbols: ATFIP1[V], FIPS5, ATFIPS5, FIP1[V] | homolog
of yeast FIP1 [V] | chr5:23488865-23494000 FORWARD
LENGTH=1196
Length = 1196
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 93/185 (50%), Gaps = 29/185 (15%)
Query: 139 GYSWFLPSYWSAFNVNVDALKEKPWVFSGVHKTDYFNYGFDETTWKLYCTSLEQH-WRTS 197
G + LPS+ + F V++D+ +EKPW + GV TDYFN+G +E +WK YC L+QH +T+
Sbjct: 324 GLDFTLPSHKTIFEVDIDSFEEKPWRYPGVEMTDYFNFGLNEESWKDYCKQLDQHRIQTT 383
Query: 198 TQQEQHWRASTQQEQHW---------RASTQTGISVDG------------SAKLNK---- 232
Q S + +Q + A+ G+ VD SAK+
Sbjct: 384 MQSRIRVYESGRTDQGYDPDLPPELAAATGAQGVPVDSSNLVKPDSVQGDSAKVPANVRP 443
Query: 233 --PKGKAIRVEESMGERQPSIHLRRPVSRDSDVVIEIKVLES-SDDHSGSGNSTVVDASL 289
P G+ I VE GER PSI R P RD D +IEI +S D+ SG + D+SL
Sbjct: 444 TLPPGRPIPVETGSGERLPSIDTRAPRMRDLDAIIEIVCQDSHEDEPSGENGTDQADSSL 503
Query: 290 EVESI 294
E++
Sbjct: 504 PGENV 508
>AT3G66652.2 | Symbols: | fip1 motif-containing protein |
chr3:2084030-2087556 FORWARD LENGTH=997
Length = 997
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 49/148 (33%)
Query: 127 AAAPNPMVSHQGG---YSWFLPSYWS--AFNVNVDALKEKPWVFSGVHKTDYFNYGFDET 181
A+A N + G Y + P+ WS F+VN+D L++KPW G +D+FN+G +E
Sbjct: 129 ASANNACIDPSLGMSQYRYSFPNPWSRTPFDVNLDVLEKKPWRDPGTDTSDFFNFGLNEQ 188
Query: 182 TWKLYCTSLEQHWRTSTQQEQHWRASTQQEQHWRASTQTGISVDGSAKLNKPKGKAIRVE 241
+WK YC KP G+AI V
Sbjct: 189 SWKDYC--------------------------------------------KPLGRAIEVR 204
Query: 242 ESMGERQPSIHLRRPVSRDSDVVIEIKV 269
ER PS LRRP D VVI+I V
Sbjct: 205 GGTLERIPSADLRRPRDPDPGVVIQIPV 232
>AT3G66652.1 | Symbols: | fip1 motif-containing protein |
chr3:2084030-2087556 FORWARD LENGTH=997
Length = 997
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 49/148 (33%)
Query: 127 AAAPNPMVSHQGG---YSWFLPSYWS--AFNVNVDALKEKPWVFSGVHKTDYFNYGFDET 181
A+A N + G Y + P+ WS F+VN+D L++KPW G +D+FN+G +E
Sbjct: 129 ASANNACIDPSLGMSQYRYSFPNPWSRTPFDVNLDVLEKKPWRDPGTDTSDFFNFGLNEQ 188
Query: 182 TWKLYCTSLEQHWRTSTQQEQHWRASTQQEQHWRASTQTGISVDGSAKLNKPKGKAIRVE 241
+WK YC KP G+AI V
Sbjct: 189 SWKDYC--------------------------------------------KPLGRAIEVR 204
Query: 242 ESMGERQPSIHLRRPVSRDSDVVIEIKV 269
ER PS LRRP D VVI+I V
Sbjct: 205 GGTLERIPSADLRRPRDPDPGVVIQIPV 232