Miyakogusa Predicted Gene

Lj6g3v1915870.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1915870.1 Non Chatacterized Hit- tr|Q9FGU0|Q9FGU0_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,34.24,6e-18,FIP1-LIKE 1 PROTEIN,NULL; seg,NULL; Fip1,Pre-mRNA
polyadenylation factor Fip1,CUFF.60150.1
         (3120 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS322934 weakly similar to UniRef100_Q8T0R9 Cluster: GH...   952   0.0  
gnl|LJGI|TC81904 similar to UniRef100_A2STI6 Cluster: Prefoldin,...   731   0.0  

>gnl|LJGI|FS322934 weakly similar to UniRef100_Q8T0R9 Cluster: GH12359p; n=1;
           Drosophila melanogaster|Rep: GH12359p - Drosophila
           melanogaster (Fruit fly), partial (5%)
          Length = 492

 Score =  952 bits (480), Expect = 0.0
 Identities = 489/492 (99%)
 Strand = Plus / Plus

                                                                       
Query: 11  aagaagcaccatttcacggtggcgacgatgatgatttcggccaactctaccttgaagaac 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aagaagcaccatttcacggtggcgacgatgatgatttcggccaactctaccttgaagaac 60

                                                                       
Query: 71  cactccctcaacaacaacaacgagaagcagaagaagaagaagccgatgctaacagtaacc 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cactccctcaacaacaacaacgagaagcagaagaagaagaagccgatgctaacagtaacc 120

                                                                       
Query: 131 acgccaatgaaaatgttgccatcgaaagcagcgacgacgacgacgatgatgatttgaaca 190
           ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 acgcctatgaaaatgttgccatcgaaagcagcgacgacgacgacgaggatgatttgaaca 180

                                                                       
Query: 191 tcgtcttaaacgacgacggattcgacattgacgaccgcgatgcttccacatttgttcata 250
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgtcttaaacgacgacggattcgacattgacgaccgcgatgcttccacatttgttcata 240

                                                                       
Query: 251 atccccagcatttgaggactcaaggtcaaggaggatcgttgtttgcgaataatcagatga 310
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcccccgcatttgaggactcaaggtcaaggaggatcgttgtttgcgaataatcagatga 300

                                                                       
Query: 311 agaagtcgaatccctcctccatggcaatgccttcctccttcaataacatgacatcaagtc 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaagtcgaatccctcctccatggcaatgccttcctccttcaataacatgacatcaagtc 360

                                                                       
Query: 371 atttgtatgctgctgcacccaatccaatggtgtcgcatcagggtggatactcatggtttc 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atttgtatgctgctgcacccaatccaatggtgtcgcatcagggtggatactcatggtttc 420

                                                                       
Query: 431 ttccttcgtactggagtgcatttaatgtaaatgttgatgctttaaaggagaagccatggg 490
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttccttcgtactggagtgcatttaatgtaaatgttgatgctttaaaggagaagccatggg 480

                       
Query: 491 tgttttctggag 502
           ||||||||||||
Sbjct: 481 tgttttctggag 492


>gnl|LJGI|TC81904 similar to UniRef100_A2STI6 Cluster: Prefoldin, alpha subunit; n=1;
            Methanocorpusculum labreanum Z|Rep: Prefoldin, alpha
            subunit - Methanocorpusculum labreanum (strain ATCC 43576
            / DSM 4855 / Z), partial (12%)
          Length = 583

 Score =  731 bits (369), Expect = 0.0
 Identities = 372/373 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2748 ccttgaaaataagaaatgtcttcaaaaccttcaagataaagggcataaagaaagcttgga 2807
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1    ccttgaaaataagaaatgtcttcaaaaccttcaagataaagggcagaaagaaagcttgga 60

                                                                        
Query: 2808 tattgaggaaggtcaggttgtaccagaagaactattcacagtgtcttctgtatccagaaa 2867
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tattgaggaaggtcaggttgtaccagaagaactattcacagtgtcttctgtatccagaaa 120

                                                                        
Query: 2868 agatgtttctgaaggtgcagcaaagtcacagcatgagaataattctgaccagtttatagg 2927
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  agatgtttctgaaggtgcagcaaagtcacagcatgagaataattctgaccagtttatagg 180

                                                                        
Query: 2928 tggttatgacaatcaaaggattcttgattcattagctaagatggagaaacgtggggagcg 2987
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tggttatgacaatcaaaggattcttgattcattagctaagatggagaaacgtggggagcg 240

                                                                        
Query: 2988 cttcaagcagcccattacactgaaaacagaagcagaagaagagggtttgaagctcaacaa 3047
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  cttcaagcagcccattacactgaaaacagaagcagaagaagagggtttgaagctcaacaa 300

                                                                        
Query: 3048 tgactcagtagatgccggtgaagcgaagcaacatagaccagctcgaaagaggcgctgggt 3107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  tgactcagtagatgccggtgaagcgaagcaacatagaccagctcgaaagaggcgctgggt 360

                         
Query: 3108 tggtagctagttt 3120
            |||||||||||||
Sbjct: 361  tggtagctagttt 373