Miyakogusa Predicted Gene
- Lj6g3v1886580.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1886580.1 Non Chatacterized Hit- tr|B7FII2|B7FII2_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,85.82,0,seg,NULL; Serinc,TMS membrane protein/tumour differentially
expressed protein; UNCHARACTERIZED,NULL;,CUFF.60101.1
(408 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06170.1 | Symbols: | Serinc-domain containing serine and sp... 534 e-152
AT1G16180.2 | Symbols: | Serinc-domain containing serine and sp... 424 e-119
AT1G16180.1 | Symbols: | Serinc-domain containing serine and sp... 424 e-119
AT3G24460.1 | Symbols: | Serinc-domain containing serine and sp... 186 2e-47
AT4G13345.1 | Symbols: MEE55 | Serinc-domain containing serine a... 176 2e-44
AT4G13345.2 | Symbols: MEE55 | Serinc-domain containing serine a... 174 1e-43
AT2G33205.1 | Symbols: | Serinc-domain containing serine and sp... 174 1e-43
>AT3G06170.1 | Symbols: | Serinc-domain containing serine and
sphingolipid biosynthesis protein | chr3:1867520-1869738
FORWARD LENGTH=409
Length = 409
Score = 534 bits (1375), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/389 (68%), Positives = 306/389 (78%)
Query: 19 VASGISQKSARIGYCFLFGASLVVSWIFREIGAPLLEKIPWIDSSDTHTKEWYQVQAVLR 78
VASGIS+KSARI YC LFGASLVVSWI RE GAPLLEK+PWI++SD++TKEWYQ QAVLR
Sbjct: 20 VASGISRKSARIAYCGLFGASLVVSWILRETGAPLLEKLPWINTSDSYTKEWYQQQAVLR 79
Query: 79 VSLGNFLFFGILALIMIGVKDQNDRRDSWHHGGWTVKLAIWXXXXXXXXXXPDVIILVYG 138
VS GNFLFF I ALIMIGVKDQNDRRDSWHHGGW +K+ +W P+VI+ +YG
Sbjct: 80 VSFGNFLFFAIYALIMIGVKDQNDRRDSWHHGGWGLKMIVWFLLVVLMFFVPNVIVSLYG 139
Query: 139 FISKFGAGLFLLVQVIILLDCTHAWNDAWVEKDEQKWYVALLAVSVGCYIGAYALSGILF 198
+SKFGAG FLLVQV++LLD TH WND+WVEKDE+KWY+ALL +S+ CYI Y SGILF
Sbjct: 140 TLSKFGAGAFLLVQVVLLLDATHNWNDSWVEKDEKKWYIALLVISIVCYIATYTFSGILF 199
Query: 199 IWFNPAGYDCSINVFFLVMTMILGFLLAIIALHPRVNGSLLPAAVISLYCAYLCYTGLSS 258
IWFNP+G DC +NVFF+VM MIL F+ AIIALHP VNGSLLPA+VIS+YCAY+CYTGLSS
Sbjct: 200 IWFNPSGQDCGLNVFFIVMPMILAFVFAIIALHPAVNGSLLPASVISVYCAYVCYTGLSS 259
Query: 259 EPRNYECNGLNKSKAVTTSTLVLGMVTTVLSVLYSALRAGXXXXXXXXXXXXXXXXXXXX 318
EP +Y CNGLNKSKAV STL+LGM+TTVLSVLYSALRAG
Sbjct: 260 EPHDYVCNGLNKSKAVNASTLILGMLTTVLSVLYSALRAGSSTTFLSPPSSPRSGVKDAL 319
Query: 319 XXXXXXXXXXXXXXXXPVSYSYSFFHLIFALASMYSAMLLSGWTSTSDSSDLIDVGWTSV 378
PVSYSYSFFH+IFALASMY+AMLLSGWT +S+S+ LIDVGWTSV
Sbjct: 320 LGDPEDGKKSGEAEARPVSYSYSFFHIIFALASMYAAMLLSGWTDSSESATLIDVGWTSV 379
Query: 379 WVRIGTEWVTAGLYAWTLLAPVFLPDREF 407
WV+I T WVTAGLY WTL+AP+ LPDREF
Sbjct: 380 WVKICTGWVTAGLYIWTLIAPLILPDREF 408
>AT1G16180.2 | Symbols: | Serinc-domain containing serine and
sphingolipid biosynthesis protein | chr1:5540905-5542670
FORWARD LENGTH=412
Length = 412
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/392 (56%), Positives = 275/392 (70%), Gaps = 4/392 (1%)
Query: 19 VASGISQKSARIGYCFLFGASLVVSWIFREIGAPLLEKIPWIDS-SDTHTKEWYQVQAVL 77
V SGIS++SARI YC LF SL+VSWI RE+ APL+EK+PWI+ T +EW++ AVL
Sbjct: 22 VVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDAVL 81
Query: 78 RVSLGNFLFFGILALIMIGVKDQNDRRDSWHHGGWTVKLAIWXXXXXXXXXXPDVIILVY 137
RVSLGNFLFF IL+++MIGVK+Q D RD HHGGW +K+ W P+ II Y
Sbjct: 82 RVSLGNFLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVIFMFFLPNEIISFY 141
Query: 138 GFISKFGAGLFLLVQVIILLDCTHAWNDAWVEKDEQKWYVALLAVSVGCYIGAYALSGIL 197
+SKFGAG FLLVQV++LLD H WND WV DEQ WY ALL VS+ CY+ + SG L
Sbjct: 142 ESMSKFGAGFFLLVQVVLLLDFVHGWNDTWVGYDEQFWYAALLVVSLVCYLATFVFSGFL 201
Query: 198 FIWFNPAGYDCSINVFFLVMTMILGFLLAIIALHPRVNGSLLPAAVISLYCAYLCYTGLS 257
F WF P+G+DC +N FF++MT+I F+ AI+ LHP V GS+LPA+VISLYC YLCY+GL+
Sbjct: 202 FHWFTPSGHDCGLNTFFIIMTLIFVFVFAIVVLHPTVGGSILPASVISLYCMYLCYSGLA 261
Query: 258 SEPRNYECNGL-NKSKAVTTSTLVLGMVTTVLSVLYSALRAGXXXXXXXXXXXXXXXXXX 316
SEPR+YECNGL N SKAV+T T+ +G++TTVLSV+YSA+RAG
Sbjct: 262 SEPRDYECNGLHNHSKAVSTGTMTIGLLTTVLSVVYSAVRAG-SSTTLLSPPDSPRAEKP 320
Query: 317 XXXXXXXXXXXXXXXXXXPVSYSYSFFHLIFALASMYSAMLLSGW-TSTSDSSDLIDVGW 375
PVSYSY+FFH+IF+LASMYSAMLL+GW TS +S L+DVGW
Sbjct: 321 LLPIDGKAEEKEEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGW 380
Query: 376 TSVWVRIGTEWVTAGLYAWTLLAPVFLPDREF 407
SVWVR+ T W TAGL+ W+L+AP+ PDREF
Sbjct: 381 PSVWVRVVTSWATAGLFIWSLVAPILFPDREF 412
>AT1G16180.1 | Symbols: | Serinc-domain containing serine and
sphingolipid biosynthesis protein | chr1:5540905-5542670
FORWARD LENGTH=412
Length = 412
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/392 (56%), Positives = 275/392 (70%), Gaps = 4/392 (1%)
Query: 19 VASGISQKSARIGYCFLFGASLVVSWIFREIGAPLLEKIPWIDS-SDTHTKEWYQVQAVL 77
V SGIS++SARI YC LF SL+VSWI RE+ APL+EK+PWI+ T +EW++ AVL
Sbjct: 22 VVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDAVL 81
Query: 78 RVSLGNFLFFGILALIMIGVKDQNDRRDSWHHGGWTVKLAIWXXXXXXXXXXPDVIILVY 137
RVSLGNFLFF IL+++MIGVK+Q D RD HHGGW +K+ W P+ II Y
Sbjct: 82 RVSLGNFLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVIFMFFLPNEIISFY 141
Query: 138 GFISKFGAGLFLLVQVIILLDCTHAWNDAWVEKDEQKWYVALLAVSVGCYIGAYALSGIL 197
+SKFGAG FLLVQV++LLD H WND WV DEQ WY ALL VS+ CY+ + SG L
Sbjct: 142 ESMSKFGAGFFLLVQVVLLLDFVHGWNDTWVGYDEQFWYAALLVVSLVCYLATFVFSGFL 201
Query: 198 FIWFNPAGYDCSINVFFLVMTMILGFLLAIIALHPRVNGSLLPAAVISLYCAYLCYTGLS 257
F WF P+G+DC +N FF++MT+I F+ AI+ LHP V GS+LPA+VISLYC YLCY+GL+
Sbjct: 202 FHWFTPSGHDCGLNTFFIIMTLIFVFVFAIVVLHPTVGGSILPASVISLYCMYLCYSGLA 261
Query: 258 SEPRNYECNGL-NKSKAVTTSTLVLGMVTTVLSVLYSALRAGXXXXXXXXXXXXXXXXXX 316
SEPR+YECNGL N SKAV+T T+ +G++TTVLSV+YSA+RAG
Sbjct: 262 SEPRDYECNGLHNHSKAVSTGTMTIGLLTTVLSVVYSAVRAG-SSTTLLSPPDSPRAEKP 320
Query: 317 XXXXXXXXXXXXXXXXXXPVSYSYSFFHLIFALASMYSAMLLSGW-TSTSDSSDLIDVGW 375
PVSYSY+FFH+IF+LASMYSAMLL+GW TS +S L+DVGW
Sbjct: 321 LLPIDGKAEEKEEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGW 380
Query: 376 TSVWVRIGTEWVTAGLYAWTLLAPVFLPDREF 407
SVWVR+ T W TAGL+ W+L+AP+ PDREF
Sbjct: 381 PSVWVRVVTSWATAGLFIWSLVAPILFPDREF 412
>AT3G24460.1 | Symbols: | Serinc-domain containing serine and
sphingolipid biosynthesis protein | chr3:8886160-8889717
REVERSE LENGTH=409
Length = 409
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 183/388 (47%), Gaps = 19/388 (4%)
Query: 21 SGISQKSARIGYCFLFGASLVVSWIFREIGAPLLEKIPWIDSSDTHTKEWYQVQAVLRVS 80
+G + AR Y +F + +++W R+ G L K+ + + VLRVS
Sbjct: 33 NGCNPWMARYVYGLIFLIANLLAWAARDYGRGALRKVTRFKNCKG-GENCLGTDGVLRVS 91
Query: 81 LGNFLFFGILALIMIGVKDQNDRRDSWHHGGWTVKLAIWXXXXXXXXXXPDVIILVYGFI 140
LG FLF+ ++ L +G + RD WH G W VKL +W P II +YG I
Sbjct: 92 LGCFLFYFVMFLSTLGTSKTHSSRDRWHSGWWFVKLIMWPALTIIPFLLPSSIIHLYGEI 151
Query: 141 SKFGAGLFLLVQVIILLDCTHAWNDAWV-EKDEQKWYVALLAVSVGCYIGAYALSGILFI 199
+ FGAG+FLL+Q+I ++ N+ + +KD ++ V ++ +S Y +++I
Sbjct: 152 AHFGAGVFLLIQLISVISFIQWLNECYQSQKDAERCRVYVMLLSTTSYTVCIVGVILMYI 211
Query: 200 WFNPAGYDCSINVFFLVMTMILGFLLAIIALHPRVNGSLLPAAVISLYCAYLCYTGLSSE 259
W+ P C +N+FF+ T+ L L+ IALHP+VN L A++ LY ++C+ + SE
Sbjct: 212 WYAPDS-SCLLNIFFITWTLFLIQLMTSIALHPKVNAGYLTPALMGLYVVFICWCAIRSE 270
Query: 260 PRNYECNGLNKSKAVTTSTLVLGMVTTVLSVLYSALRAGXXXXXXXXXXXXXXXXXXXXX 319
P CN + T ++ V +L+++ + G
Sbjct: 271 PVGESCNRKAAASNRTDWLTIISFVVALLAMVIATFSTG---------------IDSQCF 315
Query: 320 XXXXXXXXXXXXXXXPVSYSYSFFHLIFALASMYSAMLLSGWTSTSDSSD-LIDVGWTSV 378
V Y Y FFH +FA +MY AMLL GW + IDVGWTS
Sbjct: 316 QFKKDENDQEEEAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHPMKKWTIDVGWTST 375
Query: 379 WVRIGTEWVTAGLYAWTLLAPVFLPDRE 406
WVR+ EW+ +Y W L+AP+ L R
Sbjct: 376 WVRVVNEWLAVCVYIWMLVAPLILKSRR 403
>AT4G13345.1 | Symbols: MEE55 | Serinc-domain containing serine and
sphingolipid biosynthesis protein | chr4:7767292-7769426
FORWARD LENGTH=394
Length = 394
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 163/335 (48%), Gaps = 22/335 (6%)
Query: 74 QAVLRVSLGNFLFFGILALIMIGVKDQNDRRDSWHHGGWTVKLAIWXXXXXXXXXXPDVI 133
+ VLRVS G FLF+ I+ L +G + RD WH G W KL + P I
Sbjct: 78 EGVLRVSFGCFLFYFIMFLSTVGTSKTHSSRDKWHSGWWFAKLFMLLGLTIFPFLLPSSI 137
Query: 134 ILVYGFISKFGAGLFLLVQVIILLDCTHAWNDAW-VEKDEQKWYVALLAVSVGCYIGAYA 192
I YG I+ FGAG+FLL+Q+I ++ N+ + +KD ++ +V ++ ++ Y
Sbjct: 138 IQFYGEIAHFGAGVFLLIQLISIISFITWLNECFQAQKDAERCHVHVMLLATTAYTVCIL 197
Query: 193 LSGILFIWFNPAGYDCSINVFFLVMTMILGFLLAIIALHPRVNGSLLPAAVISLYCAYLC 252
+++IW+ P C +N+FF+ T+ L L+ I+LHP++N L A++ LY ++C
Sbjct: 198 GVILMYIWYVPEP-SCLLNIFFITWTLFLIQLMTSISLHPKINAGFLTPALMGLYVVFIC 256
Query: 253 YTGLSSEPRNYECNGLNKSKAVTTSTLVLGMVTTVLSVLYSALRAGXXXXXXXXXXXXXX 312
+ + SEP CN + + T ++ V +L+++ + G
Sbjct: 257 WCAIRSEPVGETCNRKAEGSSRTDWLTIISFVVALLAMVIATFSTG-------------- 302
Query: 313 XXXXXXXXXXXXXXXXXXXXXXPVSYSYSFFHLIFALASMYSAMLLSGWT-STSDSSDLI 371
+ Y Y FFH +FA +MY AMLL GW S I
Sbjct: 303 -----VDSQCFQFRKDENHEEDAIPYGYGFFHFVFATGAMYFAMLLVGWNIHHSMKKWTI 357
Query: 372 DVGWTSVWVRIGTEWVTAGLYAWTLLAPVFLPDRE 406
DVGWTS WVRI EW+ G+Y W L+AP+ L R+
Sbjct: 358 DVGWTSTWVRIVNEWLAVGVYIWMLVAPMVLKSRQ 392
>AT4G13345.2 | Symbols: MEE55 | Serinc-domain containing serine and
sphingolipid biosynthesis protein | chr4:7767292-7769426
FORWARD LENGTH=394
Length = 394
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 162/335 (48%), Gaps = 22/335 (6%)
Query: 74 QAVLRVSLGNFLFFGILALIMIGVKDQNDRRDSWHHGGWTVKLAIWXXXXXXXXXXPDVI 133
+ VLRVS G FLF+ I+ L +G + RD WH G W KL + P I
Sbjct: 78 EGVLRVSFGCFLFYFIMFLSTVGTSKTHSSRDKWHSGWWFAKLFMLLGLTIFPFLLPSSI 137
Query: 134 ILVYGFISKFGAGLFLLVQVIILLDCTHAWNDAW-VEKDEQKWYVALLAVSVGCYIGAYA 192
I YG I+ FGAG+FLL+Q+I ++ N+ + +KD ++ +V ++ ++ Y
Sbjct: 138 IQFYGEIAHFGAGVFLLIQLISIISFITWLNECFQAQKDAERCHVHVMLLATTAYTVCIL 197
Query: 193 LSGILFIWFNPAGYDCSINVFFLVMTMILGFLLAIIALHPRVNGSLLPAAVISLYCAYLC 252
+++IW+ P C +N+FF+ T+ L L+ I+LHP++N L A++ LY ++C
Sbjct: 198 GVILMYIWYVPEP-SCLLNIFFITWTLFLIQLMTSISLHPKINAGFLTPALMGLYVVFIC 256
Query: 253 YTGLSSEPRNYECNGLNKSKAVTTSTLVLGMVTTVLSVLYSALRAGXXXXXXXXXXXXXX 312
+ + +P CN + + T ++ V +L+++ + G
Sbjct: 257 WCAIRRQPVGETCNRKAEGSSRTDWLTIISFVVALLAMVIATFSTG-------------- 302
Query: 313 XXXXXXXXXXXXXXXXXXXXXXPVSYSYSFFHLIFALASMYSAMLLSGWT-STSDSSDLI 371
+ Y Y FFH +FA +MY AMLL GW S I
Sbjct: 303 -----VDSQCFQFRKDENHEEDAIPYGYGFFHFVFATGAMYFAMLLVGWNIHHSMKKWTI 357
Query: 372 DVGWTSVWVRIGTEWVTAGLYAWTLLAPVFLPDRE 406
DVGWTS WVRI EW+ G+Y W L+AP+ L R+
Sbjct: 358 DVGWTSTWVRIVNEWLAVGVYIWMLVAPMVLKSRQ 392
>AT2G33205.1 | Symbols: | Serinc-domain containing serine and
sphingolipid biosynthesis protein |
chr2:14070987-14073211 REVERSE LENGTH=422
Length = 422
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 185/381 (48%), Gaps = 24/381 (6%)
Query: 28 ARIGYCFLFGASLVVSWIFREIGAPLLEKIPWIDSSDTHTKEWYQVQAVLRVSLGNFLFF 87
AR Y +F + +W R+ L +P++ S + VLRVSLG F+F+
Sbjct: 49 ARYTYGTIFLIINLCAWFIRDYAQKALALLPYVSSCGPEGSRCFHTLGVLRVSLGCFIFY 108
Query: 88 GILALIMIGVKDQNDRRDSWHHGGWTVKLAIWXXXXXXXXXXPDVIILVYGFISKFGAGL 147
++ L ++ ++SWH W K + P + I +YG I++ GAG+
Sbjct: 109 FVMFLSTWNTMKLHEAQNSWHSDNWIFKFFLLVIVMVASFFIPQLYIQIYGEIARVGAGI 168
Query: 148 FLLVQVIILLDCTHAWNDAWVEKDEQKWYVAL-LAVSVGCYIGAYALSGILFIWFNPAGY 206
FL +Q++ +++ WN+ W+ +++ K + L +S+ YIG+ +++ +F A
Sbjct: 169 FLGLQLVSVIEFITWWNNYWMPQNQSKQSCSFGLVMSIVFYIGSVCGIAVMY-YFYGAST 227
Query: 207 DCSINVFFLVMTMILGFLLAIIALHPRV-NGSLLPAAVISLYCAYLCYTGLSSEPRNYEC 265
C +N+FF+ T+IL ++ +I+LH +V N LL + +++ Y +LC++ + SEP + +C
Sbjct: 228 ACGLNIFFISWTVILLIVMMVISLHSKVKNRGLLSSGIMASYIVFLCWSAIRSEPSHTKC 287
Query: 266 NGLNKSKAVTTSTLVLGMVTTVLSVLYSALRAGXXXXXXXXXXXXXXXXXXXXXXXXXXX 325
N + + T T +L + + +++ + G
Sbjct: 288 NA-HTQNSHTDWTTILSFLIAIGAIVMATFSTG-------------------IDSESFRF 327
Query: 326 XXXXXXXXXPVSYSYSFFHLIFALASMYSAMLLSGWT-STSDSSDLIDVGWTSVWVRIGT 384
+ YSY FFHL+F+L +MY AML W S S IDVGWTS WV+I
Sbjct: 328 RKDEAKEEDDIPYSYGFFHLVFSLGAMYFAMLFISWNLSHSTEKWSIDVGWTSTWVKIVN 387
Query: 385 EWVTAGLYAWTLLAPVFLPDR 405
EW A +Y W L+AP+ R
Sbjct: 388 EWFAAAIYLWKLIAPIVRQHR 408