Miyakogusa Predicted Gene

Lj6g3v1812130.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1812130.1 tr|D7L6M7|D7L6M7_ARALL Transcription factor
jumonji domain-containing protein OS=Arabidopsis lyrata
,45.19,3e-18,JMJC,JmjC domain; JmjC,JmjC domain; A domain family that
is part of the cupin me,JmjC domain; TRANSC,CUFF.59955.1
         (1827 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73887 similar to UniRef100_A7QUK3 Cluster: Chromosome...   303   2e-81
gnl|LJGI|TC76502 similar to UniRef100_A7QUK3 Cluster: Chromosome...   119   6e-26
gnl|LJGI|BP039096 weakly similar to UniRef100_A7Q7J4 Cluster: Ch...    62   1e-08
gnl|LJGI|TC80509 similar to UniRef100_A7Q7J4 Cluster: Chromosome...    54   3e-06

>gnl|LJGI|TC73887 similar to UniRef100_A7QUK3 Cluster: Chromosome chr10 scaffold_179,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr10 scaffold_179, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (14%)
          Length = 561

 Score =  303 bits (153), Expect = 2e-81
 Identities = 262/299 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1498 tgtttttatttgactttggagcacaagaagaagctaaaggaggaatttggtgtagaacct 1557
            |||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 1    tgtttttatttgacttgggagcacnagaagaagctaaaggaggagtttggtgtagaacct 60

                                                                        
Query: 1558 tggacatttgagcagaaacttggagaggcagtatttattcctgctggatgtccacatcaa 1617
            ||||| ||  | ||||| ||||| ||  |||||||||||||||||||||| ||||| |||
Sbjct: 61   tggactttcaaacagaatcttggggaancagtatttattcctgctggatgcccacaccaa 120

                                                                        
Query: 1618 gtaaggaatctcaagtcatgcacaaaagttgctgcagactttgtgtcaccagaaaacgtc 1677
            || |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 121  gtgaggaatctcaagtcatgcacaaaagttgctgcagacttcgtgtccccagaaaatgtc 180

                                                                        
Query: 1678 caatggtgcatgcgtgtaaccgatgagttccgacgacttccaaagaatcacaaggccaga 1737
            ||   |||  ||||| ||||  |||||||||| |  ||||| ||||| ||||| || |||
Sbjct: 181  catgagtgtctgcgtttaactaatgagttccgtcagcttcccaagaaccacaaagctaga 240

                                                                       
Query: 1738 gaagataaacttgagataaagaagatgatagtctatgctgttgaccaagctgtcaagga 1796
            |||||||||||||||||||||||||||||||| ||||| || || |||||| |||||||
Sbjct: 241  gaagataaacttgagataaagaagatgatagtttatgccgtggatcaagctatcaagga 299


>gnl|LJGI|TC76502 similar to UniRef100_A7QUK3 Cluster: Chromosome chr10 scaffold_179,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr10 scaffold_179, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 471

 Score =  119 bits (60), Expect = 6e-26
 Identities = 132/156 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1641 aaaagttgctgcagactttgtgtcaccagaaaacgtccaatggtgcatgcgtgtaaccga 1700
            |||||||||||||||||| ||||| |||||||| |||||   |||  ||||| ||||  |
Sbjct: 1    aaaagttgctgcagacttcgtgtccccagaaaatgtccatgagtgtctgcgtttaactaa 60

                                                                        
Query: 1701 tgagttccgacgacttccaaagaatcacaaggccagagaagataaacttgagataaagaa 1760
            ||||||||| |  ||||| ||||| ||| | || ||||||||||||||||||||||||||
Sbjct: 61   tgagttccgtcagcttcccaagaaccaccaagctagagaagataaacttgagataaagaa 120

                                                
Query: 1761 gatgatagtctatgctgttgaccaagctgtcaagga 1796
            ||||||||| ||||| || || |||||| |||||||
Sbjct: 121  gatgatagtttatgccgtggatcaagctatcaagga 156


>gnl|LJGI|BP039096 weakly similar to UniRef100_A7Q7J4 Cluster: Chromosome undetermined
           scaffold_60, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_60, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (6%)
          Length = 478

 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 43  gaacaaagtcaagagcaagagattgaagctaaaatacaaggaa 85
           |||||||  |||||| |||||||||||||||||||||||||||
Sbjct: 402 gaacaaacacaagagaaagagattgaagctaaaatacaaggaa 444


>gnl|LJGI|TC80509 similar to UniRef100_A7Q7J4 Cluster: Chromosome undetermined
            scaffold_60, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_60, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (13%)
          Length = 514

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 111/139 (79%)
 Strand = Plus / Plus

                                                                        
Query: 1501 ttttatttgactttggagcacaagaagaagctaaaggaggaatttggtgtagaaccttgg 1560
            |||||||||||| ||||||| |||| |||||| |||||||| | |||  | || || |||
Sbjct: 238  ttttatttgactatggagcataagaggaagcttaaggaggagtatggaattgagccgtgg 297

                                                                        
Query: 1561 acatttgagcagaaacttggagaggcagtatttattcctgctggatgtccacatcaagta 1620
            || ||||  ||||| || || || || || |||||||| ||||| ||||| || ||||| 
Sbjct: 298  acttttgtacagaagctaggcgatgctgtttttattccagctggttgtcctcaccaagtt 357

                               
Query: 1621 aggaatctcaagtcatgca 1639
            || || || ||||||||||
Sbjct: 358  agaaacctgaagtcatgca 376