Miyakogusa Predicted Gene
- Lj6g3v1787880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1787880.1 tr|Q2HTI6|Q2HTI6_MEDTR Alternative oxidase
OS=Medicago truncatula GN=MTR_2g025140 PE=3 SV=1,79.18,0,seg,NULL;
AOX,Alternative oxidase,CUFF.59933.1
(340 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g11950.1 526 e-149
Glyma09g01130.1 526 e-149
Glyma09g01130.2 393 e-109
Glyma08g07700.1 75 1e-13
Glyma05g24460.1 73 4e-13
Glyma04g14800.1 64 2e-10
Glyma08g07690.1 63 5e-10
Glyma04g14800.2 62 1e-09
Glyma04g14800.3 57 2e-08
>Glyma15g11950.1
Length = 332
Score = 526 bits (1356), Expect = e-149, Method: Compositional matrix adjust.
Identities = 247/299 (82%), Positives = 271/299 (90%), Gaps = 3/299 (1%)
Query: 43 RATVVKDTEGKVVVEKTFPSKI-PLQTGAEENVSDSDSSPPTAFELGVIKVEQSINIFLT 101
R+++++D E KV+V +FPSK PL T + +S ++ +AFE +IKVEQS+NIFLT
Sbjct: 36 RSSLLQDNEKKVIVHDSFPSKTSPLHTADKSTGGNSINT--SAFEKRIIKVEQSVNIFLT 93
Query: 102 DSVIKILDALYRDRNYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESW 161
DSVIKILD LY DR+YARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESW
Sbjct: 94 DSVIKILDTLYHDRHYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESW 153
Query: 162 NEMHHLLIMEELGGNAWWFDRFLAQHIAIFYYFMTALMYTISPRMAYHFSECVENHAFET 221
NEMHHLLIMEELGGNAWWFDRFLAQHIAIFYY MT LMY +SPRMAYHFSECVE+HAFET
Sbjct: 154 NEMHHLLIMEELGGNAWWFDRFLAQHIAIFYYIMTVLMYAVSPRMAYHFSECVESHAFET 213
Query: 222 YDKFIKDQGEELKKLPAPEVAVNYYTGGDLYLFDEFQTSRVPNTRRPKIENLYDVFVNVR 281
YDKFIK QG+ELKK+PAPEVAVNYYTG DLYLFDEFQTSRVPN+RRPKIENLYDVFVN+R
Sbjct: 214 YDKFIKVQGDELKKMPAPEVAVNYYTGDDLYLFDEFQTSRVPNSRRPKIENLYDVFVNIR 273
Query: 282 DDEAEHCKTMKACQTHGNLRSPHSYAEDDEDTVCPLEADCEGIVDCIKKSVTSSPAKVK 340
DDEAEHCKTMKACQTHGNLRSPHSYAEDD+ +VC LEADCEGIVDCIKKSV S+PAKVK
Sbjct: 274 DDEAEHCKTMKACQTHGNLRSPHSYAEDDDSSVCALEADCEGIVDCIKKSVASNPAKVK 332
>Glyma09g01130.1
Length = 332
Score = 526 bits (1354), Expect = e-149, Method: Compositional matrix adjust.
Identities = 246/298 (82%), Positives = 271/298 (90%), Gaps = 1/298 (0%)
Query: 43 RATVVKDTEGKVVVEKTFPSKIPLQTGAEENVSDSDSSPPTAFELGVIKVEQSINIFLTD 102
R+++++D E KV+V+ +FPSK A+++ S +S +AFE +IKVEQS+NIFLTD
Sbjct: 36 RSSLLQDKEEKVIVQDSFPSKTSPLHSADKSTS-GNSINTSAFEKRIIKVEQSVNIFLTD 94
Query: 103 SVIKILDALYRDRNYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWN 162
SVIKILD LY DR+YARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWN
Sbjct: 95 SVIKILDTLYHDRHYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWN 154
Query: 163 EMHHLLIMEELGGNAWWFDRFLAQHIAIFYYFMTALMYTISPRMAYHFSECVENHAFETY 222
EMHHLLIMEELGGNAWWFDRFLAQHIAIFYY MT LMY +SPRMAYHFSECVE+HAFETY
Sbjct: 155 EMHHLLIMEELGGNAWWFDRFLAQHIAIFYYIMTVLMYAVSPRMAYHFSECVESHAFETY 214
Query: 223 DKFIKDQGEELKKLPAPEVAVNYYTGGDLYLFDEFQTSRVPNTRRPKIENLYDVFVNVRD 282
DKFIK QG+ELKK+PAPEVAVNYYTG DLYLFDEFQTSRVPN+RRPKIENLYDVFVN+RD
Sbjct: 215 DKFIKVQGDELKKMPAPEVAVNYYTGDDLYLFDEFQTSRVPNSRRPKIENLYDVFVNIRD 274
Query: 283 DEAEHCKTMKACQTHGNLRSPHSYAEDDEDTVCPLEADCEGIVDCIKKSVTSSPAKVK 340
DEAEHCKTMKACQTHGNLRSPHSYAEDD+ +VC LEADCEGIVDCIKKSVTS+ AKVK
Sbjct: 275 DEAEHCKTMKACQTHGNLRSPHSYAEDDDSSVCALEADCEGIVDCIKKSVTSNAAKVK 332
>Glyma09g01130.2
Length = 270
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/234 (78%), Positives = 208/234 (88%), Gaps = 1/234 (0%)
Query: 43 RATVVKDTEGKVVVEKTFPSKIPLQTGAEENVSDSDSSPPTAFELGVIKVEQSINIFLTD 102
R+++++D E KV+V+ +FPSK A+++ S +S +AFE +IKVEQS+NIFLTD
Sbjct: 36 RSSLLQDKEEKVIVQDSFPSKTSPLHSADKSTS-GNSINTSAFEKRIIKVEQSVNIFLTD 94
Query: 103 SVIKILDALYRDRNYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWN 162
SVIKILD LY DR+YARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWN
Sbjct: 95 SVIKILDTLYHDRHYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWN 154
Query: 163 EMHHLLIMEELGGNAWWFDRFLAQHIAIFYYFMTALMYTISPRMAYHFSECVENHAFETY 222
EMHHLLIMEELGGNAWWFDRFLAQHIAIFYY MT LMY +SPRMAYHFSECVE+HAFETY
Sbjct: 155 EMHHLLIMEELGGNAWWFDRFLAQHIAIFYYIMTVLMYAVSPRMAYHFSECVESHAFETY 214
Query: 223 DKFIKDQGEELKKLPAPEVAVNYYTGGDLYLFDEFQTSRVPNTRRPKIENLYDV 276
DKFIK QG+ELKK+PAPEVAVNYYTG DLYLFDEFQTSRVPN+RRPKI ++Y +
Sbjct: 215 DKFIKVQGDELKKMPAPEVAVNYYTGDDLYLFDEFQTSRVPNSRRPKIVSIYII 268
>Glyma08g07700.1
Length = 333
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 22/191 (11%)
Query: 99 FLTDSVIKILDALYRDRNYA-RFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHF 157
+ T +++I L+ R Y R +LET+A VP +LH+ + + ++K
Sbjct: 136 YRTVKLLRIPTDLFFKRRYGCRAMMLETVAAVPGMVGGMLLHLRSLRKFQQSGGWIKALL 195
Query: 158 AESWNEMHHLLIMEELGGNAWWFDRFLAQHIAIFYYFMTALMYTISPRMAYHFSECVENH 217
E+ NE HL+ M EL W++R L + ++ ++Y +SP++A+ +E
Sbjct: 196 EEAENERMHLMTMVELVKPK-WYERLLVLAVQGVFFNAFFVLYILSPKVAHRIVGYLEEE 254
Query: 218 AFETYDKFIKD-QGEELKKLPAPEVAVNYYTGGDLYLFDEFQTSRVPNTRRPKIENLYDV 276
A +Y +++KD + ++ +PAP +A++Y+ R PK L DV
Sbjct: 255 AIHSYTEYLKDLESGAIENVPAPAIAIDYW-------------------RLPKDARLKDV 295
Query: 277 FVNVRDDEAEH 287
+R DEA H
Sbjct: 296 ITVIRADEAHH 306
>Glyma05g24460.1
Length = 194
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 22/189 (11%)
Query: 101 TDSVIKILDALYRDRNYA-RFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAE 159
T +++I L+ R Y R +LET+A VP +LH+ + ++K E
Sbjct: 24 TVKLLRIPTDLFFKRRYGCRAMMLETVAAVPGMVGGMLLHLRSLRKFQPSGGWIKALLEE 83
Query: 160 SWNEMHHLLIMEELGGNAWWFDRFLAQHIAIFYYFMTALMYTISPRMAYHFSECVENHAF 219
+ NE HL+ M EL W++R L + ++ ++Y +SP++A+ +E A
Sbjct: 84 AENERMHLMTMVELVKPK-WYERLLVLAVQGVFFNAFFVLYILSPKVAHRIVGYLEEEAI 142
Query: 220 ETYDKFIKD-QGEELKKLPAPEVAVNYYTGGDLYLFDEFQTSRVPNTRRPKIENLYDVFV 278
+Y +++KD + ++ +PAP +A++Y+ R PK L DV
Sbjct: 143 HSYTEYLKDLESGAIENVPAPAIAIDYW-------------------RLPKDAKLKDVVT 183
Query: 279 NVRDDEAEH 287
+R DEA H
Sbjct: 184 VIRADEAHH 192
>Glyma04g14800.1
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 24/192 (12%)
Query: 99 FLTDSVIKI-LDALYRDRNYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHF 157
F T V++ D ++ R R +LET+A VP +LH + ++K
Sbjct: 124 FWTVKVLRYPTDVFFQRRYGCRAMMLETVAAVPGMVAGMLLHCKSLRRFEHSGGWIKALL 183
Query: 158 AESWNEMHHLLIMEELGGNAWWFDRFLAQHIAIFYYFMTALMYTISPRMAYHFSECVENH 217
E+ NE HL+ E+ W++R L + ++ L Y +SP+ A+ +E
Sbjct: 184 EEAENERMHLMTFMEVAKPK-WYERALVITVQGVFFNAYFLGYLLSPKFAHRMVGYLEEE 242
Query: 218 AFETYDKFIK--DQGEELKKLPAPEVAVNYYTGGDLYLFDEFQTSRVPNTRRPKIENLYD 275
A +Y +F+K D+G ++ +PAP +A++Y+ + P L D
Sbjct: 243 AIHSYTEFLKELDKG-NIENVPAPAIAIDYW-------------------QLPPGSTLRD 282
Query: 276 VFVNVRDDEAEH 287
V + VR DEA H
Sbjct: 283 VVMVVRADEAHH 294
>Glyma08g07690.1
Length = 326
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 35/200 (17%)
Query: 100 LTDSV-------IKILDALY-RDRNYARFFVLETIARVPYFAFMSVLHMYESFGWWRRAD 151
LTD V +++L +Y ++R +LETIA VP +LH+ +
Sbjct: 123 LTDKVAFRAVKFLRVLSDIYFKERYGCHAMMLETIAAVPGMVGGMLLHLKSLRKFQHSGG 182
Query: 152 YLKVHFAESWNEMHHLLIMEELGGNAWWFDRFL---AQHIAIFYYFMTALMYTISPRMAY 208
++K E+ NE HL+ M EL + W +R L AQ + +F + Y +SP+ A+
Sbjct: 183 WIKALLEEAENERMHLMTMVELVKPS-WHERLLIFTAQGVFFNAFF---VFYLLSPKAAH 238
Query: 209 HFSECVENHAFETYDKFIKD-QGEELKKLPAPEVAVNYYTGGDLYLFDEFQTSRVPNTRR 267
F +E A +Y + + + +++ +PAP +A++Y+ R
Sbjct: 239 RFVGYLEEEAVISYTQHLNAIESGKVENVPAPAIAIDYW-------------------RL 279
Query: 268 PKIENLYDVFVNVRDDEAEH 287
PK L DV +R DEA H
Sbjct: 280 PKDATLKDVVTVIRADEAHH 299
>Glyma04g14800.2
Length = 200
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 24/192 (12%)
Query: 99 FLTDSVIKI-LDALYRDRNYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHF 157
F T V++ D ++ R R +LET+A VP +LH + ++K
Sbjct: 3 FWTVKVLRYPTDVFFQRRYGCRAMMLETVAAVPGMVAGMLLHCKSLRRFEHSGGWIKALL 62
Query: 158 AESWNEMHHLLIMEELGGNAWWFDRFLAQHIAIFYYFMTALMYTISPRMAYHFSECVENH 217
E+ NE HL+ E+ W++R L + ++ L Y +SP+ A+ +E
Sbjct: 63 EEAENERMHLMTFMEVAKPK-WYERALVITVQGVFFNAYFLGYLLSPKFAHRMVGYLEEE 121
Query: 218 AFETYDKFIK--DQGEELKKLPAPEVAVNYYTGGDLYLFDEFQTSRVPNTRRPKIENLYD 275
A +Y +F+K D+G ++ +PAP +A++Y+ + P L D
Sbjct: 122 AIHSYTEFLKELDKG-NIENVPAPAIAIDYW-------------------QLPPGSTLRD 161
Query: 276 VFVNVRDDEAEH 287
V + VR DEA H
Sbjct: 162 VVMVVRADEAHH 173
>Glyma04g14800.3
Length = 175
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 121 FVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAWWF 180
+LET+A VP +LH + ++K E+ NE HL+ E+ W+
Sbjct: 1 MMLETVAAVPGMVAGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVA-KPKWY 59
Query: 181 DRFLAQHIAIFYYFMTALMYTISPRMAYHFSECVENHAFETYDKFIK--DQGEELKKLPA 238
+R L + ++ L Y +SP+ A+ +E A +Y +F+K D+G ++ +PA
Sbjct: 60 ERALVITVQGVFFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKG-NIENVPA 118
Query: 239 PEVAVNYYTGGDLYLFDEFQTSRVPNTRRPKIENLYDVFVNVRDDEAEH 287
P +A++Y+ + P L DV + VR DEA H
Sbjct: 119 PAIAIDYW-------------------QLPPGSTLRDVVMVVRADEAHH 148