Miyakogusa Predicted Gene
- Lj6g3v1787880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1787880.1 tr|Q2HTI6|Q2HTI6_MEDTR Alternative oxidase
OS=Medicago truncatula GN=MTR_2g025140 PE=3 SV=1,79.18,0,seg,NULL;
AOX,Alternative oxidase,CUFF.59933.1
(1026 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59449 similar to UniRef100_Q2HTI6 Cluster: Alternativ... 2034 0.0
gnl|LJGI|TC74771 similar to UniRef100_Q9FZ04 Cluster: Plastid te... 771 0.0
gnl|LJGI|DC594901 weakly similar to UniRef100_Q9FZ04 Cluster: Pl... 365 e-100
gnl|LJGI|TC67000 homologue to UniRef100_A7R8B3 Cluster: Chromoso... 190 1e-47
>gnl|LJGI|TC59449 similar to UniRef100_Q2HTI6 Cluster: Alternative oxidase; n=1;
Medicago truncatula|Rep: Alternative oxidase - Medicago
truncatula (Barrel medic), partial (87%)
Length = 1407
Score = 2034 bits (1026), Expect = 0.0
Identities = 1026/1026 (100%)
Strand = Plus / Plus
Query: 1 atggcggcgattttctcttcttcaatcttctcaacttcatctctcaacaaatcgccatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atggcggcgattttctcttcttcaatcttctcaacttcatctctcaacaaatcgccatct 143
Query: 61 tcacactaccctcacagacaccacaatttcagccccctttcacttcgttcaccactttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tcacactaccctcacagacaccacaatttcagccccctttcacttcgttcaccactttcc 203
Query: 121 agggtacgtgcaactgttgtgaaagacacagagggtaaagtggttgtggagaagactttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 agggtacgtgcaactgttgtgaaagacacagagggtaaagtggttgtggagaagactttt 263
Query: 181 ccctccaagatccctctgcaaactggtgctgaggagaacgtgagtgatagtgatagttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccctccaagatccctctgcaaactggtgctgaggagaacgtgagtgatagtgatagttca 323
Query: 241 ccccccactgcttttgagttgggggttatcaaggttgaacaatcaatcaatatcttcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccccccactgcttttgagttgggggttatcaaggttgaacaatcaatcaatatcttcctc 383
Query: 301 acggattctgtgataaagatactagatgctttataccgtgacagaaattatgcaaggttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acggattctgtgataaagatactagatgctttataccgtgacagaaattatgcaaggttt 443
Query: 361 tttgtgctggaaactattgcgagagttccttactttgcctttatgtcagttctccacatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttgtgctggaaactattgcgagagttccttactttgcctttatgtcagttctccacatg 503
Query: 421 tatgagagttttggctggtggagacgggcagattatctgaaagtgcactttgctgagagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tatgagagttttggctggtggagacgggcagattatctgaaagtgcactttgctgagagc 563
Query: 481 tggaatgaaatgcatcatttgctcattatggaagaacttggggggaatgcttggtggttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tggaatgaaatgcatcatttgctcattatggaagaacttggggggaatgcttggtggttt 623
Query: 541 gaccgctttctcgctcaacatattgcaatattttattattttatgacagctctaatgtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaccgctttctcgctcaacatattgcaatattttattattttatgacagctctaatgtat 683
Query: 601 acgataagcccaagaatggcatatcacttttctgaatgtgtagagaatcatgcatttgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acgataagcccaagaatggcatatcacttttctgaatgtgtagagaatcatgcatttgaa 743
Query: 661 acttatgacaagtttatcaaggaccaaggagaggaattgaaaaagttgccggcacctgag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acttatgacaagtttatcaaggaccaaggagaggaattgaaaaagttgccggcacctgag 803
Query: 721 gttgctgtgaattattatacaggaggtgacttgtatttatttgatgagtttcaaacttcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gttgctgtgaattattatacaggaggtgacttgtatttatttgatgagtttcaaacttcc 863
Query: 781 agagttccaaatactagaaggcctaagatagagaatctgtacgacgtatttgtaaatgtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 agagttccaaatactagaaggcctaagatagagaatctgtacgacgtatttgtaaatgtc 923
Query: 841 cgagatgacgaagctgaacattgtaagacaatgaaggcttgtcaaacccatgggaacctc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 cgagatgacgaagctgaacattgtaagacaatgaaggcttgtcaaacccatgggaacctc 983
Query: 901 cggtcacctcattcatatgcagaggatgatgaagacacagtgtgtcctcttgaagcagat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 cggtcacctcattcatatgcagaggatgatgaagacacagtgtgtcctcttgaagcagat 1043
Query: 961 tgtgaaggaatagtagactgtataaagaaatctgtcacttctagtccagctaaggtgaag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 tgtgaaggaatagtagactgtataaagaaatctgtcacttctagtccagctaaggtgaag 1103
Query: 1021 taagat 1026
||||||
Sbjct: 1104 taagat 1109
>gnl|LJGI|TC74771 similar to UniRef100_Q9FZ04 Cluster: Plastid terminal oxidase; n=1;
Capsicum annuum|Rep: Plastid terminal oxidase - Capsicum
annuum (Bell pepper), partial (18%)
Length = 623
Score = 771 bits (389), Expect = 0.0
Identities = 392/393 (99%)
Strand = Plus / Plus
Query: 1 atggcggcgattttctcttcttcaatcttctcaacttcatctctcaacaaatcgccatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atggcggcgattttctcttcttcaatcttctcaacttcatctctcaacaaatcgccatct 290
Query: 61 tcacactaccctcacagacaccacaatttcagccccctttcacttcgttcaccactttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tcacactaccctcacagacaccacaatttcagccccctttcacttcgttcaccactttcc 350
Query: 121 agggtacgtgcaactgttgtgaaagacacagagggtaaagtggttgtggagaagactttt 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 351 agggtacgtgcaactgttgtgaaagacacagagggaaaagtggttgtggagaagactttt 410
Query: 181 ccctccaagatccctctgcaaactggtgctgaggagaacgtgagtgatagtgatagttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ccctccaagatccctctgcaaactggtgctgaggagaacgtgagtgatagtgatagttca 470
Query: 241 ccccccactgcttttgagttgggggttatcaaggttgaacaatcaatcaatatcttcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ccccccactgcttttgagttgggggttatcaaggttgaacaatcaatcaatatcttcctc 530
Query: 301 acggattctgtgataaagatactagatgctttataccgtgacagaaattatgcaaggttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 acggattctgtgataaagatactagatgctttataccgtgacagaaattatgcaaggttt 590
Query: 361 tttgtgctggaaactattgcgagagttccttac 393
|||||||||||||||||||||||||||||||||
Sbjct: 591 tttgtgctggaaactattgcgagagttccttac 623
>gnl|LJGI|DC594901 weakly similar to UniRef100_Q9FZ04 Cluster: Plastid terminal
oxidase; n=1; Capsicum annuum|Rep: Plastid terminal
oxidase - Capsicum annuum (Bell pepper), partial (6%)
Length = 401
Score = 365 bits (184), Expect = e-100
Identities = 184/184 (100%)
Strand = Plus / Plus
Query: 1 atggcggcgattttctcttcttcaatcttctcaacttcatctctcaacaaatcgccatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atggcggcgattttctcttcttcaatcttctcaacttcatctctcaacaaatcgccatct 277
Query: 61 tcacactaccctcacagacaccacaatttcagccccctttcacttcgttcaccactttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tcacactaccctcacagacaccacaatttcagccccctttcacttcgttcaccactttcc 337
Query: 121 agggtacgtgcaactgttgtgaaagacacagagggtaaagtggttgtggagaagactttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agggtacgtgcaactgttgtgaaagacacagagggtaaagtggttgtggagaagactttt 397
Query: 181 ccct 184
||||
Sbjct: 398 ccct 401
>gnl|LJGI|TC67000 homologue to UniRef100_A7R8B3 Cluster: Chromosome undetermined
scaffold_2411, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_2411,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (21%)
Length = 674
Score = 190 bits (96), Expect = 1e-47
Identities = 111/116 (95%)
Strand = Plus / Plus
Query: 399 ctttatgtcagttctccacatgtatgagagttttggctggtggagacgggcagattatct 458
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 179 ctttatgtcagttctccacatgtatgagagttttggctggtggagacaggcagattacct 238
Query: 459 gaaagtgcactttgctgagagctggaatgaaatgcatcatttgctcattatggaag 514
|||||||||| |||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 239 gaaagtgcacgttgctgagagttggaatgaaatgcatcatttgctcatcatggaag 294