Miyakogusa Predicted Gene
- Lj6g3v1722680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1722680.1 Non Chatacterized Hit- tr|I1L026|I1L026_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,71.27,0,FAMILY NOT
NAMED,NULL; Small MutS-related domain,Smr protein/MutS2 C-terminal;
TPR-like,NULL; PPR_2,,NODE_40646_length_2519_cov_16.862247.path2.1
(2152 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS317486 weakly similar to UniRef100_A7R299 Cluster: Ch... 1453 0.0
gnl|LJGI|FS349373 similar to UniRef100_Q9LF83 Cluster: 67kD chlo... 212 7e-54
gnl|LJGI|AV407328 weakly similar to UniRef100_A7R299 Cluster: Ch... 64 4e-09
gnl|LJGI|TC67633 similar to UniRef100_Q97Z86 Cluster: Ribose-pho... 58 2e-07
gnl|LJGI|TC64139 weakly similar to UniRef100_Q9FSB5 Cluster: RSP... 54 4e-06
>gnl|LJGI|FS317486 weakly similar to UniRef100_A7R299 Cluster: Chromosome undetermined
scaffold_410, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_410, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(35%)
Length = 766
Score = 1453 bits (733), Expect = 0.0
Identities = 751/757 (99%)
Strand = Plus / Plus
Query: 526 gttgttctttataatgtgaccctcaagttgttcagggagatcaaggattttgggagagca 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 gttgttctttataatgtgaccctcaagttgttcagggagatcaaggattttgggagagca 69
Query: 586 gagaagctgtttgatgaaatgcttcaaagaggggttaagccgaatctcattacattttca 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gagaagctgtttgatgaaatgcttcaaagaggggttaagccgaatctcattacattttca 129
Query: 646 actttggttgcctgtgcttccacgtgttctgttccgcataaggctgtggagtggtttgag 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 actttggttgcctgtgcttccacgtgttctgttccgcataaggctgtggagtggtttgag 189
Query: 706 aagatgccctcttttgagtgtgagcccgatgacaacttgtcggcgtctatgatatatgtt 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aagatgccctcttttgagtgtgagcccgatgacaacttgtcggcgtctatgatatatgtt 249
Query: 766 tatgcgcggattggtaatgtcgatatggctttgagcctgtatgatcgcgcgaagacggag 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tatgcgcggattggtaatgtcgatatggctttgagcctgtatgatcgcgcgaagacggag 309
Query: 826 aagtggcgtgttgatacggtggcgttctcggcgttgattaagatgtatgggatgtcggga 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aagtggcgtgttgatacggtggcgttctcggcgttgattaagatgtatgggatgtcggga 369
Query: 886 aattatgatgcgtgcttaagtgtttacagtgacatgaaggttcttggggctaagcctaac 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aattatgatgcgtgcttaagtgtttacagtgacatgaaggttcttggggctaagcctaac 429
Query: 946 atggtaacgtacaacaatctgttgtatgccatggggagagctaagagggccagggatgcc 1005
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gtggtaacgtacaacaatctgttgtatgccatggggagagctaagagggccagggatgcc 489
Query: 1006 aaaactatatatgaggagatggtaaagaatggattttcacctaattggccaacctatgca 1065
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aaaactatatatgaggagatggtaaagaatggattttcacctaattggccaacctatgcg 549
Query: 1066 gctctcttgcaagcctattgtagggcgcgatgtagtgaagatgctctaagtgtgtataag 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gctctcttgcaagcctattgtagggcgcgatgtagtgaagatgctctaagtgtgtataag 609
Query: 1126 gaaatgaaggaaaagggcaaggatgtggataaagttctttataacatgctctttgacatg 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gaaatgaaggaaaagggcaaggatgtggataaagttctttataacatgctctttgacatg 669
Query: 1186 tgtgctcattttgaaaatgcagataaagctatgaaaatatttgcagacatgaaaagttcg 1245
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 670 tgtgctcattttggcaatgcagatgaagctatgaaaatatttgcagacatgaaaagttct 729
Query: 1246 ggggattgccagccagacaatttcacatacacatctt 1282
|||||||||||||||||||||||||||||||||||||
Sbjct: 730 ggggattgccagccagacaatttcacatacacatctt 766
>gnl|LJGI|FS349373 similar to UniRef100_Q9LF83 Cluster: 67kD chloroplastic RNA-binding
protein, P67; n=1; Arabidopsis thaliana|Rep: 67kD
chloroplastic RNA-binding protein, P67 - Arabidopsis
thaliana (Mouse-ear cress), partial (11%)
Length = 468
Score = 212 bits (107), Expect = 7e-54
Identities = 265/317 (83%), Gaps = 3/317 (0%)
Strand = Plus / Minus
Query: 1829 ttggagctgctatgaccgccttacgtgtttggataaacgacttgtctaaggctttggaat 1888
|||||||||||||||| || |||| |||||||||||||||||||| ||||||||||||||
Sbjct: 467 ttggagctgctatgactgcgttacatgtttggataaacgacttgtgtaaggctttggaat 408
Query: 1889 caggcgaggagcttccaccagtactaggaattaatactgggattgggaaacacaatgttt 1948
|||| |||||||||||| || ||||||||||||||||||||||| ||| || | |||
Sbjct: 407 caggggaggagcttccatca---ctaggaattaatactgggattggaaaataccagtttt 351
Query: 1949 cagataaaggcttgggcagtgtattggaatcatatctgaaggaactcaatgctccattcc 2008
|||| ||||||||||| |||||||| ||||| || ||||| ||||||| ||||||||||
Sbjct: 350 cagacaaaggcttgggtagtgtatttgaatcgcatttgaagaaactcaaagctccattcc 291
Query: 2009 ataaggctactgataaggctggttggtttttgactacatacgaagctgccaagtcatggc 2068
|| ||||| | |||||| |||| |||||||| | || | |||| ||||| |||||||
Sbjct: 290 atgaggctccagataagcctggctggttttttatatcaaagaaagcagccaaatcatggc 231
Query: 2069 tgcagtccaggggttcacctaaaatagttgctgctttggactccagggttttagaggttc 2128
|| ||| ||||||||| | ||| | |||||||| ||||||| |||||||| ||||
Sbjct: 230 tgaagtttaggggttcagccaaatcaattgctgctctggactctttggttttaggtgttc 171
Query: 2129 caacagtggctcttccc 2145
||||| |||| ||||||
Sbjct: 170 caacaatggcccttccc 154
>gnl|LJGI|AV407328 weakly similar to UniRef100_A7R299 Cluster: Chromosome undetermined
scaffold_410, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_410,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (9%)
Length = 428
Score = 63.9 bits (32), Expect = 4e-09
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 261 catctgggtcaatcccagaagccccagagccaaaca 296
||||||||||||||||| ||||||||||||||||||
Sbjct: 238 catctgggtcaatcccaaaagccccagagccaaaca 273
>gnl|LJGI|TC67633 similar to UniRef100_Q97Z86 Cluster: Ribose-phosphate
pyrophosphokinase; n=1; Sulfolobus solfataricus|Rep:
Ribose-phosphate pyrophosphokinase - Sulfolobus
solfataricus, partial (6%)
Length = 754
Score = 58.0 bits (29), Expect = 2e-07
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 110 gcaatctcaaacttctctactttccaacttcccataacctcttccctctcactcaatcca 169
|||||||| || ||||| ||||||| |||| ||| || ||||| |||||||||||| |||
Sbjct: 318 gcaatctcgaagttctcaactttcctactttccacaaactctttcctctcactcaaccca 259
Query: 170 aaacc 174
|||||
Sbjct: 258 aaacc 254
>gnl|LJGI|TC64139 weakly similar to UniRef100_Q9FSB5 Cluster: RSP67.2; n=1; Raphanus
sativus|Rep: RSP67.2 - Raphanus sativus (Radish),
partial (13%)
Length = 720
Score = 54.0 bits (27), Expect = 4e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 687 ggctgtggagtggtttgagaagatgcc 713
|||||||||||||||||||||||||||
Sbjct: 611 ggctgtggagtggtttgagaagatgcc 637