Miyakogusa Predicted Gene

Lj6g3v1721590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1721590.1 Non Chatacterized Hit- tr|Q2A9B5|Q2A9B5_BRAOL
Putative uncharacterized protein OS=Brassica oleracea
,40.3,6e-18,Pollen_Ole_e_I,Pollen Ole e 1 allergen/extensin;
seg,NULL,CUFF.59839.1
         (173 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g00980.1                                                       190   6e-49
Glyma07g39800.1                                                       130   8e-31
Glyma09g01640.1                                                        70   8e-13

>Glyma17g00980.1 
          Length = 176

 Score =  190 bits (483), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 105/160 (65%), Positives = 117/160 (73%), Gaps = 10/160 (6%)

Query: 15  SPTFGKDN--LQFKLSTRDDELVQMAGYGEEKLSTILVTGSVICEASFDGAGDQPHPWPI 72
           SP  G+DN  L   LS+RD E+VQ+AGYGEEKLST+L+TGSV CEA       QPH WPI
Sbjct: 20  SPAEGEDNHPLLELLSSRD-EVVQIAGYGEEKLSTVLITGSVTCEAPHR---PQPHAWPI 75

Query: 73  QGVSVAVNCHFHAIKRK---GKSMVARGVTDEFGDFIVDLPSHLHAIHNLEKICRVKILR 129
           QG SV VNC  H    K   GKSMVA GVTDEFGDF++DLPSHLHAI NLEK+C VKI R
Sbjct: 76  QGASVGVNCKSHGRNNKWNKGKSMVATGVTDEFGDFMIDLPSHLHAIPNLEKVCIVKIHR 135

Query: 130 IPKGSQCWPAHS-KRHKGLTLLTFENGTRIYNAGNIAFRH 168
           IPK S C PAH  K+HKGLTL +F NG R YNAGNI  +H
Sbjct: 136 IPKASLCRPAHVIKKHKGLTLSSFGNGIRTYNAGNIRIQH 175


>Glyma07g39800.1 
          Length = 147

 Score =  130 bits (326), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/157 (51%), Positives = 92/157 (58%), Gaps = 33/157 (21%)

Query: 15  SPTFGKDN--LQFKLSTRDDELVQMAGYGEEKLSTILVTGSVICEASFDGAGDQPHPWPI 72
           SP  G++N  L   LS+RD E+VQ+AGYGEEKLST+L+TGSV CEA       QPH WP+
Sbjct: 20  SPAAGENNHPLLELLSSRD-EVVQIAGYGEEKLSTVLITGSVNCEAPHQ-PQPQPHAWPV 77

Query: 73  QGVSVAVNCHFHAIKRKGKSMVARGVTDEFGDFIVDLPSHLHAIHNLEKICRVKILRIPK 132
           QG SVAVNC  H  K KGKSMV                            C VKI RIPK
Sbjct: 78  QGASVAVNCQSHGRKWKGKSMV----------------------------CTVKIHRIPK 109

Query: 133 GSQCWPAH-SKRHKGLTLLTFENGTRIYNAGNIAFRH 168
            S C  AH  K+HKGLTL +F NG R YNAGNI  +H
Sbjct: 110 ASLCRAAHVMKKHKGLTLSSFGNGFRTYNAGNIRIQH 146


>Glyma09g01640.1 
          Length = 43

 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 35/42 (83%), Positives = 35/42 (83%)

Query: 93  MVARGVTDEFGDFIVDLPSHLHAIHNLEKICRVKILRIPKGS 134
           MVA  VTDEFG FIVDLPS LHAI NLEKICRVKIL  PKGS
Sbjct: 1   MVANAVTDEFGGFIVDLPSRLHAIPNLEKICRVKILWSPKGS 42