Miyakogusa Predicted Gene

Lj6g3v1721590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1721590.1 Non Characterized Hit- tr|Q2A9B5|Q2A9B5_BRAOL
Putative uncharacterized protein OS=Brassica oleracea
,40.3,6e-18,Pollen_Ole_e_I,Pollen Ole e 1 allergen/extensin;
seg,NULL,CUFF.59839.1
         (173 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g133932.1 | pollen Ole e I family allergens | HC | chr4:56...   173   9e-44

>Medtr4g133932.1 | pollen Ole e I family allergens | HC |
           chr4:56060052-56057651 | 20130731
          Length = 206

 Score =  173 bits (438), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 117/165 (70%), Gaps = 11/165 (6%)

Query: 14  PSPTFGKDNLQ--FKLSTRDDELVQMAGYGEEKLSTILVTGSVICEASFDGAGDQPH--P 69
           PS   G ++ Q  F LS+R+ E+V++AGYGEEKLST+L+TGS+ C    DG  +  H   
Sbjct: 32  PSSASGVEDYQNLFGLSSRE-EVVEIAGYGEEKLSTVLITGSLHC----DGPNNNHHSNA 86

Query: 70  WPIQGVSVAVNCHFHAIKRKGKSMVARGVTDEFGDFIVDLPSHLHAIHNLEKICRVKILR 129
           WPI G  V+VNC  HA +R GK+MVA GVTDEFGDF+VDLPS+LHAI NLEKICRVK+ +
Sbjct: 87  WPIPGALVSVNCQSHATERTGKAMVANGVTDEFGDFMVDLPSYLHAIPNLEKICRVKVHK 146

Query: 130 IPKGSQCWPA-HSKRHKG-LTLLTFENGTRIYNAGNIAFRHSTSK 172
           IPKGS C PA H  + KG L L T  NG R Y+AG I  +HS S+
Sbjct: 147 IPKGSLCRPARHVNKQKGLLKLSTIGNGIRTYDAGTIRIQHSASE 191