Miyakogusa Predicted Gene

Lj6g3v1721590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1721590.1 Non Chatacterized Hit- tr|Q2A9B5|Q2A9B5_BRAOL
Putative uncharacterized protein OS=Brassica oleracea
,40.3,6e-18,Pollen_Ole_e_I,Pollen Ole e 1 allergen/extensin;
seg,NULL,CUFF.59839.1
         (173 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47635.1 | Symbols:  | Pollen Ole e 1 allergen and extensin f...   112   9e-26
AT2G40113.1 | Symbols:  | Pollen Ole e 1 allergen and extensin f...   102   2e-22
AT4G17215.1 | Symbols:  | Pollen Ole e 1 allergen and extensin f...   100   7e-22

>AT5G47635.1 | Symbols:  | Pollen Ole e 1 allergen and extensin
           family protein | chr5:19307281-19307849 REVERSE
           LENGTH=164
          Length = 164

 Score =  112 bits (281), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 91/140 (65%), Gaps = 7/140 (5%)

Query: 33  ELVQMAGYGEEKLSTILVTGSVICEASFDGAGDQPHPWPIQGVSVAVNCHFHAIKRKGKS 92
           E+V+MAGYGE+KLS++++TGS++C    D +    H  PI G +VA+ CH  + KR+ K 
Sbjct: 31  EMVEMAGYGEQKLSSVVITGSLLC----DTSRPHLHSIPIPGATVAIKCHTGS-KRRSKW 85

Query: 93  MVARGVTDEFGDFIVDLPSHLHAIHNLEKICRVKILRIPKGSQCWPAHSKRHKGLTLLTF 152
           +  + VTDE G+F +DLPS LHAI +LE  C +K + +P+  +C+   +  HK + L++ 
Sbjct: 86  I--KAVTDELGEFEIDLPSQLHAIPHLENTCFIKPVYVPRPYRCYNTSTNIHKPIKLVSS 143

Query: 153 ENGTRIYNAGNIAFRHSTSK 172
            NG R+Y +G I  +  +S+
Sbjct: 144 TNGFRVYTSGKIRLQGHSSR 163


>AT2G40113.1 | Symbols:  | Pollen Ole e 1 allergen and extensin
           family protein | chr2:16750254-16750906 FORWARD
           LENGTH=169
          Length = 169

 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 90/148 (60%), Gaps = 22/148 (14%)

Query: 33  ELVQMAGYGEEKLSTILVTGSVICEASFDGAGDQPHPWPIQGVSVAVNCHFHAIKRKGKS 92
           E+  MAGYGE KLS++++TGS++C              P+ G +VA+ CH   +K++ K 
Sbjct: 32  EMSDMAGYGEHKLSSVVITGSLLCNT------------PVSGATVAIKCHT-GLKQRSKW 78

Query: 93  MVARGVTDEFGDFIVDLPSHLHAIHNLEKICRVKILRIPKG-SQCWPAHSKR--HKGLTL 149
           +  + VT++FG+F++ LPSHLHAI  LEK C VK + +PK   +C+   SK   HK + L
Sbjct: 79  I--KSVTNDFGEFVIHLPSHLHAIPQLEKACFVKPIHVPKHYHRCYHTFSKSNIHKDIKL 136

Query: 150 LTFENGTRIYNAGNIAFR--HS--TSKP 173
           ++  NG R+Y +G I     HS  TS+P
Sbjct: 137 VSSRNGFRVYTSGTIKLHGGHSSRTSQP 164


>AT4G17215.1 | Symbols:  | Pollen Ole e 1 allergen and extensin
           family protein | chr4:9655884-9656425 FORWARD LENGTH=150
          Length = 150

 Score =  100 bits (248), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/139 (43%), Positives = 88/139 (63%), Gaps = 16/139 (11%)

Query: 32  DELVQMAGYGEEKLSTILVTGSVICEASFDGAGDQPHPWPIQGVSVAVNCHFHAIKRKGK 91
           DE+V+MAGYGE+KLS++L+T S++  +S           PI G ++   CH      + +
Sbjct: 27  DEMVEMAGYGEQKLSSVLLTASLLSSSSS----------PIHGATIGFKCH---TGHRRR 73

Query: 92  SMVARGVTDEFGDFIVDLPSHLHAIHNLEKICRVKILRIPKGSQCWPAHSKRHKGLTLLT 151
           S   + VT+E G F++DLPSHLHAI +L+K C +K L +PK  +C    SK H+G+ LL+
Sbjct: 74  SKWIKAVTNELGQFVIDLPSHLHAIPDLDKACIIKTLSVPKPYRC---SSKIHRGIQLLS 130

Query: 152 FENGTRIYNAGNIAFRHST 170
             NG+R+Y AGNI  + ST
Sbjct: 131 SSNGSRVYTAGNITLQEST 149