Miyakogusa Predicted Gene

Lj6g3v1721590.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1721590.1 Non Chatacterized Hit- tr|Q2A9B5|Q2A9B5_BRAOL
Putative uncharacterized protein OS=Brassica oleracea
,40.3,6e-18,Pollen_Ole_e_I,Pollen Ole e 1 allergen/extensin;
seg,NULL,CUFF.59839.1
         (525 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57514                                                       98   7e-20

>gnl|LJGI|TC57514 
          Length = 988

 Score = 97.6 bits (49), Expect = 7e-20
 Identities = 118/141 (83%)
 Strand = Plus / Plus

                                                                       
Query: 263 ggaaaggaaaatcaatggtagcaagaggggttactgatgaatttggagacttcattgtcg 322
           |||||||||||||||||| ||   |||| || || ||||||||||| || ||||| || |
Sbjct: 379 ggaaaggaaaatcaatggaagtgcgaggtgtgaccgatgaatttggcgatttcatggtgg 438

                                                                       
Query: 323 acctcccttcccaccttcatgctattcacaacttggaaaagatatgcagagtgaaaattc 382
           |||||||||| ||||||||| ||||||  ||||||||||| |||||    |||||| |||
Sbjct: 439 acctcccttcacaccttcattctattcctaacttggaaaatatatgtgtggtgaaagttc 498

                                
Query: 383 ttcgaattccaaagggatcac 403
            |||||||||||| |||||||
Sbjct: 499 atcgaattccaaaaggatcac 519